RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CHTF8P0CG12 524 aa8.21□□□□□ -1.1
TSC2-220ENST00000568238 CHTOPQ9Y3Y2 248 aaKnown RBP8.21□□□□□ -1.1
TSC2-220ENST00000568238 IGLC3P0DOY3 106 aa8.2□□□□□ -1.1
TSC2-220ENST00000568238 COA6Q5JTJ3 125 aaKnown RBP8.2□□□□□ -1.1
TSC2-220ENST00000568238 OR10D4PQ8NGN7 298 aa8.2□□□□□ -1.1
TSC2-220ENST00000568238 SPACA4Q8TDM5 124 aa8.2□□□□□ -1.1
TSC2-220ENST00000568238 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
TSC2-220ENST00000568238 HNRNPA3P51991 378 aaKnown RBP8.19□□□□□ -1.1
TSC2-220ENST00000568238 DPH3Q96FX2 82 aa8.19□□□□□ -1.1
TSC2-220ENST00000568238 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
TSC2-220ENST00000568238 IGLV5-45A0A087WSX0 123 aa8.18□□□□□ -1.1
TSC2-220ENST00000568238 A0A087WYN8 130 aa8.18□□□□□ -1.1
TSC2-220ENST00000568238 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
TSC2-220ENST00000568238 LINC01561Q8N1V8 128 aa8.18□□□□□ -1.1
TSC2-220ENST00000568238 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
TSC2-220ENST00000568238 CAMK2N2Q96S95 79 aa8.18□□□□□ -1.1
TSC2-220ENST00000568238 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
TSC2-220ENST00000568238 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
TSC2-220ENST00000568238 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
TSC2-220ENST00000568238 H3BRM9 83 aa8.17□□□□□ -1.1
TSC2-220ENST00000568238 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
TSC2-220ENST00000568238 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
TSC2-220ENST00000568238 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
TSC2-220ENST00000568238 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
TSC2-220ENST00000568238 F8VRH5 84 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 PRSS2P07478 247 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 TNXBP22105 4242 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 ODF1Q14990 250 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 TMEM170BQ5T4T1 132 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 Q6ZRU5 148 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 C2orf48Q96LS8 159 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
TSC2-220ENST00000568238 IGKV2-24A0A0C4DH68 120 aa8.15□□□□□ -1.1
TSC2-220ENST00000568238 S100A6P06703 90 aa8.15□□□□□ -1.1
TSC2-220ENST00000568238 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
TSC2-220ENST00000568238 SERTAD4-AS1Q5TG53 156 aa8.15□□□□□ -1.1
TSC2-220ENST00000568238 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.1
TSC2-220ENST00000568238 NDUFA1O15239 70 aa8.14□□□□□ -1.11
TSC2-220ENST00000568238 MAJINQ3KP22 176 aa8.14□□□□□ -1.11
TSC2-220ENST00000568238 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
TSC2-220ENST00000568238 C7orf33Q8WU49 177 aa8.14□□□□□ -1.11
TSC2-220ENST00000568238 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
TSC2-220ENST00000568238 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
TSC2-220ENST00000568238 CKS1BP61024 79 aa8.13□□□□□ -1.11
TSC2-220ENST00000568238 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
TSC2-220ENST00000568238 C10orf25Q5T742 122 aa8.13□□□□□ -1.11
TSC2-220ENST00000568238 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
TSC2-220ENST00000568238 Q8IZM0 81 aa8.13□□□□□ -1.11
TSC2-220ENST00000568238 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
TSC2-220ENST00000568238 A0A096LNI7 61 aa8.12□□□□□ -1.11
TSC2-220ENST00000568238 DPM2O94777 84 aa8.12□□□□□ -1.11
TSC2-220ENST00000568238 PLNP26678 52 aa8.12□□□□□ -1.11
TSC2-220ENST00000568238 KRTDAPP60985 99 aa8.12□□□□□ -1.11
TSC2-220ENST00000568238 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
TSC2-220ENST00000568238 STPG4Q8N801 248 aa8.12□□□□□ -1.11
TSC2-220ENST00000568238 F8WDY8 70 aa8.11□□□□□ -1.11
TSC2-220ENST00000568238 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
TSC2-220ENST00000568238 S100A2P29034 98 aa8.11□□□□□ -1.11
TSC2-220ENST00000568238 LINC00474Q9P2X8 69 aa8.11□□□□□ -1.11
TSC2-220ENST00000568238 C6orf48Q9UBA6 75 aa8.11□□□□□ -1.11
TSC2-220ENST00000568238 IGLV5-39A0A0G2JS06 123 aa8.1□□□□□ -1.11
TSC2-220ENST00000568238 TMEM223A0PJW6 202 aa8.1□□□□□ -1.11
TSC2-220ENST00000568238 IGKCP01834 107 aa8.1□□□□□ -1.11
TSC2-220ENST00000568238 SNRPEP62304 92 aaKnown RBP8.1□□□□□ -1.11
TSC2-220ENST00000568238 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
TSC2-220ENST00000568238 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
TSC2-220ENST00000568238 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
TSC2-220ENST00000568238 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
TSC2-220ENST00000568238 LOC107984640A0A0U1RRK4 108 aa8.08□□□□□ -1.12
TSC2-220ENST00000568238 CXCL5P42830 114 aa8.08□□□□□ -1.12
TSC2-220ENST00000568238 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
TSC2-220ENST00000568238 RNF151Q2KHN1 245 aa8.08□□□□□ -1.12
TSC2-220ENST00000568238 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
TSC2-220ENST00000568238 LINC01545Q5VT33 79 aa8.08□□□□□ -1.12
TSC2-220ENST00000568238 PLA2G2DQ9UNK4 145 aa8.08□□□□□ -1.12
TSC2-220ENST00000568238 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
TSC2-220ENST00000568238 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
TSC2-220ENST00000568238 GAGE2BQ13066 116 aa8.07□□□□□ -1.12
TSC2-220ENST00000568238 TMA7Q9Y2S6 64 aaKnown RBP8.07□□□□□ -1.12
TSC2-220ENST00000568238 C20orf202A1L168 122 aa8.06□□□□□ -1.12
TSC2-220ENST00000568238 C5orf52A6NGY3 159 aa8.06□□□□□ -1.12
TSC2-220ENST00000568238 PTTG1IPP53801 180 aa8.05□□□□□ -1.12
TSC2-220ENST00000568238 HERVK_113P61574 105 aa8.05□□□□□ -1.12
TSC2-220ENST00000568238 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
TSC2-220ENST00000568238 Q6ZRP5 223 aa8.04□□□□□ -1.12
TSC2-220ENST00000568238 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
TSC2-220ENST00000568238 NDUFC2-KCTD14E9PQ53 114 aa8.03□□□□□ -1.12
TSC2-220ENST00000568238 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
TSC2-220ENST00000568238 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
TSC2-220ENST00000568238 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
TSC2-220ENST00000568238 ZNF625Q96I27 306 aaPredicted RBP8.03□□□□□ -1.12
TSC2-220ENST00000568238 LEPROTO15243 131 aa8.02□□□□□ -1.13
TSC2-220ENST00000568238 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
TSC2-220ENST00000568238 PFN2P35080 140 aa8.01□□□□□ -1.13
TSC2-220ENST00000568238 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
TSC2-220ENST00000568238 J3QQQ9 107 aa8□□□□□ -1.13
TSC2-220ENST00000568238 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
TSC2-220ENST00000568238 SFTA2Q6UW10 78 aa8□□□□□ -1.13
TSC2-220ENST00000568238 ERG28Q9UKR5 140 aa8□□□□□ -1.13
TSC2-220ENST00000568238 E9PLD3 99 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms