RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 LELP1Q5T871 98 aa3.88□□□□□ -1.79
SF3B3-210ENST00000567654 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
SF3B3-210ENST00000567654 GEMIN7Q9H840 131 aaKnown RBP3.88□□□□□ -1.79
SF3B3-210ENST00000567654 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 H3BNG1 76 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 K7ERJ3 54 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 ESRGQ1W209 222 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 LBHQ53QV2 105 aaPredicted RBP3.87□□□□□ -1.79
SF3B3-210ENST00000567654 COL5A1-AS1Q5SY13 56 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 CEND1Q8N111 149 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 LINC00269Q8N2A0 174 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 LITAFQ99732 161 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
SF3B3-210ENST00000567654 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 IGLV10-54A0A075B6I4 117 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 GAGE10A6NGK3 116 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 CCL25O15444 150 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 IGHV3-30P01768 117 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 ANGP03950 147 aaKnown RBP3.86□□□□□ -1.79
SF3B3-210ENST00000567654 IGHV3-30-5P0DP03 117 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 XCL1P47992 114 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 SMAGPQ0VAQ4 97 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 ZFAND6Q6FIF0 208 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 C5orf38Q86SI9 138 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 B9D2Q9BPU9 175 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 NAA38Q9BRA0 125 aaKnown RBP3.86□□□□□ -1.79
SF3B3-210ENST00000567654 DNAH17Q9UFH2 4485 aa3.86□□□□□ -1.79
SF3B3-210ENST00000567654 A0A087WZ39 114 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 TRAV10A0A0B4J240 114 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 H3BRM9 83 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 NDUFA1O15239 70 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 SEC11AP67812 179 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 REG3AQ06141 175 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 TAL2Q16559 108 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 ENHOQ6UWT2 76 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 RAB37Q96AX2 223 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
SF3B3-210ENST00000567654 HIST1H4GQ99525 98 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 SPANXB1Q9NS25 103 aaPredicted RBP3.85□□□□□ -1.79
SF3B3-210ENST00000567654 NDUFA12Q9UI09 145 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 KLK12Q9UKR0 248 aa3.85□□□□□ -1.79
SF3B3-210ENST00000567654 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 NPC2P61916 151 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 SH2D6Q7Z4S9 175 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 DAND5Q8N907 189 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 COX7B2Q8TF08 81 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 CHCHD10Q8WYQ3 142 aaPredicted RBP3.84□□□□□ -1.79
SF3B3-210ENST00000567654 Q9H8V8 135 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 PRR34Q9NV39 138 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 NHP2Q9NX24 153 aaKnown RBP3.84□□□□□ -1.79
SF3B3-210ENST00000567654 ALMS1Q8TCU4 4167 aa3.84□□□□□ -1.79
SF3B3-210ENST00000567654 A0A0U1RRA0 63 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 SS18Q15532 418 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 SOSTDC1Q6X4U4 206 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 MUSTN1Q8IVN3 82 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 TOMM7Q9P0U1 55 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 LINC00588Q9Y4M8 146 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 FRAS1Q86XX4 4008 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 STAB2Q8WWQ8 2551 aa3.83□□□□□ -1.8
SF3B3-210ENST00000567654 A4D1N5 150 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 A6NDN8 102 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 IGLL5B9A064 214 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 PRSS2P07478 247 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 SMIM13P0DJ93 91 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.8
SF3B3-210ENST00000567654 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 MIAQ16674 131 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 CD164L2Q6UWJ8 174 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 C2orf82Q6UX34 121 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 LINC00526Q96FQ7 95 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 SPANXDQ9BXN6 97 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 SPANXCQ9NY87 97 aa3.82□□□□□ -1.8
SF3B3-210ENST00000567654 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 IGLV5-52A0A0A0MRZ9 124 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 TMEM238C9JI98 176 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 H3BUT2 72 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 APOMO95445 188 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 CFC1BP0CG36 223 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 CFC1P0CG37 223 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 LINC01556Q5JQF7 62 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 LINC01561Q8N1V8 128 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 C6orf223Q8N319 242 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 C15orf53Q8NAA6 179 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 MEGF8Q7Z7M0 2845 aa3.81□□□□□ -1.8
SF3B3-210ENST00000567654 COX7A2LO14548 114 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 TIMM17BO60830 172 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 TSPAN13O95857 204 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 DNAH10OSP0CZ25 163 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 MEIG1Q5JSS6 88 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 Q8IZM0 81 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 APLNQ9ULZ1 77 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms