RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 Q8N1X5 172 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
COMMD4-219ENST00000567399 A0A096LNI7 61 aa9.69□□□□□ -0.86
COMMD4-219ENST00000567399 SMIM1B2RUZ4 78 aa9.69□□□□□ -0.86
COMMD4-219ENST00000567399 EPM2AB3EWF7 344 aa9.69□□□□□ -0.86
COMMD4-219ENST00000567399 C10orf25Q5T742 122 aa9.69□□□□□ -0.86
COMMD4-219ENST00000567399 COX7B2Q8TF08 81 aa9.69□□□□□ -0.86
COMMD4-219ENST00000567399 C11orf86A6NJI1 115 aa9.68□□□□□ -0.86
COMMD4-219ENST00000567399 PANO1I0J062 215 aa9.68□□□□□ -0.86
COMMD4-219ENST00000567399 MAP1LC3CQ9BXW4 147 aa9.68□□□□□ -0.86
COMMD4-219ENST00000567399 LRP1BQ9NZR2 4599 aa9.67□□□□□ -0.86
COMMD4-219ENST00000567399 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
COMMD4-219ENST00000567399 F8VRH5 84 aa9.67□□□□□ -0.86
COMMD4-219ENST00000567399 ZNF22P17026 224 aaPredicted RBP9.67□□□□□ -0.86
COMMD4-219ENST00000567399 CXCL5P42830 114 aa9.67□□□□□ -0.86
COMMD4-219ENST00000567399 STPG4Q8N801 248 aa9.67□□□□□ -0.86
COMMD4-219ENST00000567399 SPACA4Q8TDM5 124 aa9.67□□□□□ -0.86
COMMD4-219ENST00000567399 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
COMMD4-219ENST00000567399 A0A087WYN8 130 aa9.66□□□□□ -0.86
COMMD4-219ENST00000567399 PTTG1IPP53801 180 aa9.66□□□□□ -0.86
COMMD4-219ENST00000567399 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
COMMD4-219ENST00000567399 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
COMMD4-219ENST00000567399 Q5VSD8 79 aa9.65□□□□□ -0.86
COMMD4-219ENST00000567399 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
COMMD4-219ENST00000567399 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
COMMD4-219ENST00000567399 PLA2G1BP04054 148 aaKnown RBP9.63□□□□□ -0.87
COMMD4-219ENST00000567399 C9orf116Q5BN46 136 aaPredicted RBP9.63□□□□□ -0.87
COMMD4-219ENST00000567399 TLX1NBP0CAT3 122 aa9.62□□□□□ -0.87
COMMD4-219ENST00000567399 ODF1Q14990 250 aa9.62□□□□□ -0.87
COMMD4-219ENST00000567399 PLAC8Q9NZF1 115 aa9.62□□□□□ -0.87
COMMD4-219ENST00000567399 NDUFC2-KCTD14E9PQ53 114 aa9.61□□□□□ -0.87
COMMD4-219ENST00000567399 PLNP26678 52 aa9.61□□□□□ -0.87
COMMD4-219ENST00000567399 Q6ZRP5 223 aa9.61□□□□□ -0.87
COMMD4-219ENST00000567399 C7orf33Q8WU49 177 aa9.61□□□□□ -0.87
COMMD4-219ENST00000567399 KIAA1109Q2LD37 5005 aa9.61□□□□□ -0.87
COMMD4-219ENST00000567399 IGLV5-39A0A0G2JS06 123 aa9.6□□□□□ -0.87
COMMD4-219ENST00000567399 TMEM223A0PJW6 202 aa9.6□□□□□ -0.87
COMMD4-219ENST00000567399 DPM2O94777 84 aa9.6□□□□□ -0.87
COMMD4-219ENST00000567399 COA6Q5JTJ3 125 aaKnown RBP9.6□□□□□ -0.87
COMMD4-219ENST00000567399 PMCHL2Q9BQD1 86 aa9.6□□□□□ -0.87
COMMD4-219ENST00000567399 IGKCP01834 107 aa9.59□□□□□ -0.87
COMMD4-219ENST00000567399 S100A6P06703 90 aa9.59□□□□□ -0.87
COMMD4-219ENST00000567399 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
COMMD4-219ENST00000567399 SYS1-DBNDD2H3BUS1 97 aa9.58□□□□□ -0.88
COMMD4-219ENST00000567399 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
COMMD4-219ENST00000567399 HERVK_113P61574 105 aa9.58□□□□□ -0.88
COMMD4-219ENST00000567399 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
COMMD4-219ENST00000567399 KRTDAPP60985 99 aa9.57□□□□□ -0.88
COMMD4-219ENST00000567399 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
COMMD4-219ENST00000567399 APOBP04114 4563 aaKnown RBP9.57□□□□□ -0.88
COMMD4-219ENST00000567399 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
COMMD4-219ENST00000567399 S100A2P29034 98 aa9.56□□□□□ -0.88
COMMD4-219ENST00000567399 PFN2P35080 140 aa9.56□□□□□ -0.88
COMMD4-219ENST00000567399 ZNF625Q96I27 306 aaPredicted RBP9.56□□□□□ -0.88
COMMD4-219ENST00000567399 PET117Q6UWS5 81 aa9.55□□□□□ -0.88
COMMD4-219ENST00000567399 FAM19A5Q7Z5A7 132 aaPredicted RBP9.55□□□□□ -0.88
COMMD4-219ENST00000567399 RYR1P21817 5038 aa9.54□□□□□ -0.88
COMMD4-219ENST00000567399 INAFM2P0DMQ5 153 aa9.54□□□□□ -0.88
COMMD4-219ENST00000567399 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
COMMD4-219ENST00000567399 FAM168BA1KXE4 195 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 C20orf202A1L168 122 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 LEPROTO15243 131 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 C3orf79P0CE67 100 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 ERG28Q9UKR5 140 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 HSPG2P98160 4391 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 DNAH8Q96JB1 4490 aa9.53□□□□□ -0.88
COMMD4-219ENST00000567399 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
COMMD4-219ENST00000567399 HERC2O95714 4834 aa9.51□□□□□ -0.89
COMMD4-219ENST00000567399 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
COMMD4-219ENST00000567399 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
COMMD4-219ENST00000567399 LINC00158P58513 81 aa9.51□□□□□ -0.89
COMMD4-219ENST00000567399 COX17Q14061 63 aa9.51□□□□□ -0.89
COMMD4-219ENST00000567399 MEIG1Q5JSS6 88 aa9.51□□□□□ -0.89
COMMD4-219ENST00000567399 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
COMMD4-219ENST00000567399 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
COMMD4-219ENST00000567399 HERV-K104P63124 156 aa9.5□□□□□ -0.89
COMMD4-219ENST00000567399 LINC01545Q5VT33 79 aa9.5□□□□□ -0.89
COMMD4-219ENST00000567399 A0A0U1RRA0 63 aa9.49□□□□□ -0.89
COMMD4-219ENST00000567399 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
COMMD4-219ENST00000567399 J3QQQ9 107 aa9.49□□□□□ -0.89
COMMD4-219ENST00000567399 M0QXV9 152 aa9.49□□□□□ -0.89
COMMD4-219ENST00000567399 UBE2BP63146 152 aa9.49□□□□□ -0.89
COMMD4-219ENST00000567399 HIST3H2BBQ8N257 126 aa9.48□□□□□ -0.89
COMMD4-219ENST00000567399 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
COMMD4-219ENST00000567399 E9PLD3 99 aa9.46□□□□□ -0.9
COMMD4-219ENST00000567399 NMUP48645 174 aa9.46□□□□□ -0.9
COMMD4-219ENST00000567399 AKR1D1P51857 326 aa9.46□□□□□ -0.9
COMMD4-219ENST00000567399 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.9
COMMD4-219ENST00000567399 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
COMMD4-219ENST00000567399 C22orf24Q9Y442 160 aa9.46□□□□□ -0.9
COMMD4-219ENST00000567399 SMIM13P0DJ93 91 aa9.45□□□□□ -0.9
COMMD4-219ENST00000567399 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
COMMD4-219ENST00000567399 SERTAD4-AS1Q5TG53 156 aa9.45□□□□□ -0.9
COMMD4-219ENST00000567399 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
COMMD4-219ENST00000567399 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
COMMD4-219ENST00000567399 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
COMMD4-219ENST00000567399 RPL24P83731 157 aaKnown RBP9.43□□□□□ -0.9
COMMD4-219ENST00000567399 ATOH7Q8N100 152 aa9.43□□□□□ -0.9
COMMD4-219ENST00000567399 KRTAP10-4P60372 401 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms