RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
LINC00563-201ENST00000566370 SND1-IT1Q9HBX3 110 aa9.25□□□□□ -0.93
LINC00563-201ENST00000566370 SPATA25Q9BR10 227 aa9.24□□□□□ -0.93
LINC00563-201ENST00000566370 EGFEM1PQ0D2K5 195 aa9.23□□□□□ -0.93
LINC00563-201ENST00000566370 COX17Q14061 63 aa9.23□□□□□ -0.93
LINC00563-201ENST00000566370 CLPSL2Q6UWE3 100 aa9.23□□□□□ -0.93
LINC00563-201ENST00000566370 SOSTDC1Q6X4U4 206 aa9.23□□□□□ -0.93
LINC00563-201ENST00000566370 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
LINC00563-201ENST00000566370 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
LINC00563-201ENST00000566370 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
LINC00563-201ENST00000566370 OTOGQ6ZRI0 2925 aa9.23□□□□□ -0.93
LINC00563-201ENST00000566370 KRTAP24-1Q3LI83 254 aa9.22□□□□□ -0.93
LINC00563-201ENST00000566370 UBE2WQ96B02 151 aa9.22□□□□□ -0.93
LINC00563-201ENST00000566370 C11orf68Q9H3H3 251 aaKnown RBP9.22□□□□□ -0.93
LINC00563-201ENST00000566370 PFN2P35080 140 aa9.22□□□□□ -0.93
LINC00563-201ENST00000566370 TRACP01848 142 aa9.21□□□□□ -0.94
LINC00563-201ENST00000566370 SCGB1A1P11684 91 aa9.21□□□□□ -0.94
LINC00563-201ENST00000566370 OXLD1Q5BKU9 147 aa9.21□□□□□ -0.94
LINC00563-201ENST00000566370 CLEC2BQ92478 149 aa9.21□□□□□ -0.94
LINC00563-201ENST00000566370 H0YGX0 51 aa9.2□□□□□ -0.94
LINC00563-201ENST00000566370 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
LINC00563-201ENST00000566370 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
LINC00563-201ENST00000566370 TRAV8-4A0A0B4J246 113 aa9.19□□□□□ -0.94
LINC00563-201ENST00000566370 CCL18P55774 89 aa9.19□□□□□ -0.94
LINC00563-201ENST00000566370 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
LINC00563-201ENST00000566370 TEP1Q99973 2627 aaKnown RBP9.17□□□□□ -0.94
LINC00563-201ENST00000566370 KRTAP10-11P60412 298 aa9.17□□□□□ -0.94
LINC00563-201ENST00000566370 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
LINC00563-201ENST00000566370 OR13C6PQ8NH95 151 aa9.17□□□□□ -0.94
LINC00563-201ENST00000566370 HIVEP1P15822 2718 aa9.17□□□□□ -0.94
LINC00563-201ENST00000566370 IGLV10-54A0A075B6I4 117 aa9.16□□□□□ -0.94
LINC00563-201ENST00000566370 SNCGO76070 127 aa9.16□□□□□ -0.94
LINC00563-201ENST00000566370 DNAL4O96015 105 aa9.16□□□□□ -0.94
LINC00563-201ENST00000566370 NDUFC2O95298 119 aa9.15□□□□□ -0.94
LINC00563-201ENST00000566370 SPAG11BQ08648 103 aa9.15□□□□□ -0.94
LINC00563-201ENST00000566370 KPRPQ5T749 579 aaPredicted RBP9.15□□□□□ -0.94
LINC00563-201ENST00000566370 PRR34Q9NV39 138 aa9.15□□□□□ -0.94
LINC00563-201ENST00000566370 KLK12Q9UKR0 248 aa9.15□□□□□ -0.94
LINC00563-201ENST00000566370 KIAA0087Q14695 138 aa9.14□□□□□ -0.95
LINC00563-201ENST00000566370 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
LINC00563-201ENST00000566370 ATRQ13535 2644 aa9.13□□□□□ -0.95
LINC00563-201ENST00000566370 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
LINC00563-201ENST00000566370 C11orf45Q8TAV5 145 aa9.13□□□□□ -0.95
LINC00563-201ENST00000566370 RETNQ9HD89 108 aa9.13□□□□□ -0.95
LINC00563-201ENST00000566370 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
LINC00563-201ENST00000566370 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
LINC00563-201ENST00000566370 SMIM11BQ8TCY0 68 aa9.12□□□□□ -0.95
LINC00563-201ENST00000566370 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
LINC00563-201ENST00000566370 Q6ZTC4 211 aa9.11□□□□□ -0.95
LINC00563-201ENST00000566370 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
LINC00563-201ENST00000566370 CUBNO60494 3623 aa9.11□□□□□ -0.95
LINC00563-201ENST00000566370 DEFB131BA0A096LNP1 70 aa9.1□□□□□ -0.95
LINC00563-201ENST00000566370 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
LINC00563-201ENST00000566370 ACYP1P07311 99 aa9.1□□□□□ -0.95
LINC00563-201ENST00000566370 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
LINC00563-201ENST00000566370 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
LINC00563-201ENST00000566370 FAM240AA0A1B0GVK7 77 aa9.09□□□□□ -0.95
LINC00563-201ENST00000566370 A0A1B0GX51 115 aa9.09□□□□□ -0.95
LINC00563-201ENST00000566370 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
LINC00563-201ENST00000566370 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
LINC00563-201ENST00000566370 F8P00451 2351 aa9.09□□□□□ -0.95
LINC00563-201ENST00000566370 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
LINC00563-201ENST00000566370 A0A0J9YWU9 116 aa9.08□□□□□ -0.96
LINC00563-201ENST00000566370 ENHOQ6UWT2 76 aa9.08□□□□□ -0.96
LINC00563-201ENST00000566370 Q8N3U1 123 aa9.08□□□□□ -0.96
LINC00563-201ENST00000566370 C15orf53Q8NAA6 179 aa9.08□□□□□ -0.96
LINC00563-201ENST00000566370 TRAV10A0A0B4J240 114 aa9.07□□□□□ -0.96
LINC00563-201ENST00000566370 F8WDY8 70 aa9.07□□□□□ -0.96
LINC00563-201ENST00000566370 ZNF561-AS1K7EIQ3 104 aa9.07□□□□□ -0.96
LINC00563-201ENST00000566370 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
LINC00563-201ENST00000566370 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
LINC00563-201ENST00000566370 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
LINC00563-201ENST00000566370 C1orf43Q9BWL3 253 aa9.05□□□□□ -0.96
LINC00563-201ENST00000566370 TENM1Q9UKZ4 2725 aa9.05□□□□□ -0.96
LINC00563-201ENST00000566370 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
LINC00563-201ENST00000566370 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
LINC00563-201ENST00000566370 UNQ6190/PRO20217Q6UXQ8 127 aa9.04□□□□□ -0.96
LINC00563-201ENST00000566370 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
LINC00563-201ENST00000566370 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
LINC00563-201ENST00000566370 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
LINC00563-201ENST00000566370 CAMK2N2Q96S95 79 aa9.03□□□□□ -0.96
LINC00563-201ENST00000566370 VWFP04275 2813 aa9.02□□□□□ -0.97
LINC00563-201ENST00000566370 LECT2O14960 151 aa9.02□□□□□ -0.97
LINC00563-201ENST00000566370 XGP55808 180 aa9.02□□□□□ -0.97
LINC00563-201ENST00000566370 ESRGQ1W209 222 aa9.02□□□□□ -0.97
LINC00563-201ENST00000566370 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
LINC00563-201ENST00000566370 RMI2Q96E14 147 aa9.01□□□□□ -0.97
LINC00563-201ENST00000566370 A0A087WYN8 130 aa9□□□□□ -0.97
LINC00563-201ENST00000566370 A0A1B0GV72 72 aa9□□□□□ -0.97
LINC00563-201ENST00000566370 H3BQ85 93 aa9□□□□□ -0.97
LINC00563-201ENST00000566370 NCR3O14931 201 aa9□□□□□ -0.97
LINC00563-201ENST00000566370 MT-ATP8P03928 68 aa9□□□□□ -0.97
LINC00563-201ENST00000566370 C6orf223Q8N319 242 aa9□□□□□ -0.97
LINC00563-201ENST00000566370 Q9HAA7 133 aa9□□□□□ -0.97
LINC00563-201ENST00000566370 GHRHP01286 108 aa8.99□□□□□ -0.97
LINC00563-201ENST00000566370 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
LINC00563-201ENST00000566370 NBEAL2Q6ZNJ1 2754 aa8.99□□□□□ -0.97
LINC00563-201ENST00000566370 IGKV2D-24A0A075B6R9 120 aa8.98□□□□□ -0.97
LINC00563-201ENST00000566370 GAGE2BQ13066 116 aa8.98□□□□□ -0.97
LINC00563-201ENST00000566370 GAGE2EQ4V326 116 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms