RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PMCHL2Q9BQD1 86 aa5.25□□□□□ -1.57
CDH13-208ENST00000566333 MAP1LC3CQ9BXW4 147 aa5.25□□□□□ -1.57
CDH13-208ENST00000566333 TMEM223A0PJW6 202 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 C5orf52A6NGY3 159 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 H3BRM9 83 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 PANO1I0J062 215 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 TMEM170BQ5T4T1 132 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 LINC01545Q5VT33 79 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 C2orf82Q6UX34 121 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 SDIM1Q6ZPB5 146 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 CAMK2N2Q96S95 79 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 FAM30AQ9NZY2 134 aa5.24□□□□□ -1.57
CDH13-208ENST00000566333 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.23□□□□□ -1.57
CDH13-208ENST00000566333 NDUFA1O15239 70 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 DPM2O94777 84 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 GHRHP01286 108 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 S100A6P06703 90 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 PLNP26678 52 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 SNRPEP62304 92 aaKnown RBP5.23□□□□□ -1.57
CDH13-208ENST00000566333 CIRBPQ14011 172 aaKnown RBP5.23□□□□□ -1.57
CDH13-208ENST00000566333 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 COX7B2Q8TF08 81 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 TOMM7Q9P0U1 55 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 C6orf48Q9UBA6 75 aa5.23□□□□□ -1.57
CDH13-208ENST00000566333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
CDH13-208ENST00000566333 A0A096LNI7 61 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 F8WDY8 70 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 IGKCP01834 107 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 CHTF8P0CG12 524 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 TSPEAR-AS2P59090 65 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 KRTDAPP60985 99 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 HAMPP81172 84 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 PET117Q6UWS5 81 aa5.22□□□□□ -1.57
CDH13-208ENST00000566333 TRBV30A0A0K0K1B3 111 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 CDK2AP2O75956 126 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 PRSS2P07478 247 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 CXCL5P42830 114 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 XGP55808 180 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 RNF151Q2KHN1 245 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 SPACA4Q8TDM5 124 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 ZNF625Q96I27 306 aaPredicted RBP5.21□□□□□ -1.58
CDH13-208ENST00000566333 VPS13BQ7Z7G8 4022 aa5.21□□□□□ -1.58
CDH13-208ENST00000566333 S100A2P29034 98 aa5.2□□□□□ -1.58
CDH13-208ENST00000566333 C9orf116Q5BN46 136 aaPredicted RBP5.2□□□□□ -1.58
CDH13-208ENST00000566333 SCXQ7RTU7 201 aa5.2□□□□□ -1.58
CDH13-208ENST00000566333 KRTAP17-1Q9BYP8 105 aa5.2□□□□□ -1.58
CDH13-208ENST00000566333 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
CDH13-208ENST00000566333 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
CDH13-208ENST00000566333 TLX1NBP0CAT3 122 aa5.19□□□□□ -1.58
CDH13-208ENST00000566333 PTTG1IPP53801 180 aa5.19□□□□□ -1.58
CDH13-208ENST00000566333 CKS1BP61024 79 aa5.19□□□□□ -1.58
CDH13-208ENST00000566333 C6orf226Q5I0X4 101 aa5.19□□□□□ -1.58
CDH13-208ENST00000566333 Q6ZRP5 223 aa5.19□□□□□ -1.58
CDH13-208ENST00000566333 SRRM2Q9UQ35 2752 aaKnown RBP5.19□□□□□ -1.58
CDH13-208ENST00000566333 IGKV2-24A0A0C4DH68 120 aa5.18□□□□□ -1.58
CDH13-208ENST00000566333 LEPROTO15243 131 aa5.18□□□□□ -1.58
CDH13-208ENST00000566333 RPL18AQ02543 176 aaKnown RBP5.18□□□□□ -1.58
CDH13-208ENST00000566333 PKHD1L1Q86WI1 4243 aa5.18□□□□□ -1.58
CDH13-208ENST00000566333 IGKV2D-26A0A0A0MRZ7 120 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 C20orf202A1L168 122 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 E9PLD3 99 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 ATOH7Q8N100 152 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 STPG4Q8N801 248 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 CIRBP-AS1Q8TBR5 109 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 ABCA13Q86UQ4 5058 aa5.17□□□□□ -1.58
CDH13-208ENST00000566333 A0A087WYN8 130 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 TMEM238LA0A1B0GVL6 79 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 EPM2AB3EWF7 344 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 J3QQQ9 107 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 HERVK_113P61574 105 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 GAGE2BQ13066 116 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 ANKRD39Q53RE8 183 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 C9orf129Q5T035 196 aaKnown RBP5.16□□□□□ -1.58
CDH13-208ENST00000566333 SFTA2Q6UW10 78 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 KRTAP7-1Q8IUC3 87 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 PLEKHB2Q96CS7 222 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 PLAC8Q9NZF1 115 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 NDUFA12Q9UI09 145 aa5.16□□□□□ -1.58
CDH13-208ENST00000566333 MAJINQ3KP22 176 aa5.15□□□□□ -1.59
CDH13-208ENST00000566333 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.59
CDH13-208ENST00000566333 LINC00474Q9P2X8 69 aa5.15□□□□□ -1.59
CDH13-208ENST00000566333 ERG28Q9UKR5 140 aa5.15□□□□□ -1.59
CDH13-208ENST00000566333 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.59
CDH13-208ENST00000566333 A0A1W2PNN7 141 aa5.14□□□□□ -1.59
CDH13-208ENST00000566333 FAM168BA1KXE4 195 aa5.14□□□□□ -1.59
CDH13-208ENST00000566333 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
CDH13-208ENST00000566333 GAGE2EQ4V326 116 aa5.14□□□□□ -1.59
CDH13-208ENST00000566333 GAGE2DQ9UEU5 116 aa5.14□□□□□ -1.59
CDH13-208ENST00000566333 EIF4EBP3O60516 100 aaPredicted RBP5.13□□□□□ -1.59
CDH13-208ENST00000566333 LGALS3P17931 250 aaKnown RBP5.13□□□□□ -1.59
CDH13-208ENST00000566333 PFN2P35080 140 aa5.13□□□□□ -1.59
CDH13-208ENST00000566333 NMUP48645 174 aa5.13□□□□□ -1.59
CDH13-208ENST00000566333 AKR1D1P51857 326 aa5.13□□□□□ -1.59
CDH13-208ENST00000566333 HERV-K104P63124 156 aa5.13□□□□□ -1.59
CDH13-208ENST00000566333 XAGE1AQ9HD64 81 aa5.13□□□□□ -1.59
CDH13-208ENST00000566333 MYMXA0A1B0GTQ4 84 aa5.12□□□□□ -1.59
CDH13-208ENST00000566333 SMR3BP02814 79 aaPredicted RBP5.12□□□□□ -1.59
CDH13-208ENST00000566333 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms