RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
VPS9D1-205ENST00000565452 APOMO95445 188 aa5.52□□□□□ -1.53
VPS9D1-205ENST00000565452 UBE2D1P51668 147 aa5.52□□□□□ -1.53
VPS9D1-205ENST00000565452 HERVK_113P63121 156 aa5.52□□□□□ -1.53
VPS9D1-205ENST00000565452 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
VPS9D1-205ENST00000565452 PACRGQ96M98 296 aaPredicted RBP5.52□□□□□ -1.53
VPS9D1-205ENST00000565452 OPRPNQ99935 248 aaPredicted RBP5.52□□□□□ -1.53
VPS9D1-205ENST00000565452 IGHV3OR16-9A0A0B4J2B5 98 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 IGHV1-58A0A0C4DH39 117 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 F8WDY8 70 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 COX7A2LO14548 114 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 SERF1AO75920 110 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 LEPROTL1O95214 131 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 XCL1P47992 114 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 FOXI1Q12951 378 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 RNASE13Q5GAN3 156 aaKnown RBP5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 LINC00173Q6ZV60 143 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 CST9LQ9H4G1 147 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 HSPB8Q9UJY1 196 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 PKIGQ9Y2B9 76 aa5.51□□□□□ -1.53
VPS9D1-205ENST00000565452 TRAV12-1A0A0B4J245 112 aa5.5□□□□□ -1.53
VPS9D1-205ENST00000565452 TINCRA0A1B0GVN0 87 aa5.5□□□□□ -1.53
VPS9D1-205ENST00000565452 MALP21145 153 aa5.5□□□□□ -1.53
VPS9D1-205ENST00000565452 LINC00242Q5T6M2 205 aa5.5□□□□□ -1.53
VPS9D1-205ENST00000565452 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
VPS9D1-205ENST00000565452 IGLV1-50A0A075B6I6 118 aa5.49□□□□□ -1.53
VPS9D1-205ENST00000565452 A0A087WZ39 114 aa5.49□□□□□ -1.53
VPS9D1-205ENST00000565452 PMCHL1Q16048 86 aa5.49□□□□□ -1.53
VPS9D1-205ENST00000565452 FAM19A2Q8N3H0 131 aa5.49□□□□□ -1.53
VPS9D1-205ENST00000565452 DIRC1Q969H9 104 aa5.49□□□□□ -1.53
VPS9D1-205ENST00000565452 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
VPS9D1-205ENST00000565452 A0A096LNI7 61 aa5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 GVQW2A0A096LPI5 108 aaPredicted RBP5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 NUPR1O60356 82 aa5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 NDUFA6P56556 154 aa5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 LINC01547P58512 204 aaPredicted RBP5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 LINC00310P59036 64 aa5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 OR10D4PQ8NGN7 298 aa5.48□□□□□ -1.53
VPS9D1-205ENST00000565452 IGLC3P0DOY3 106 aa5.47□□□□□ -1.53
VPS9D1-205ENST00000565452 C5orf38Q86SI9 138 aa5.47□□□□□ -1.53
VPS9D1-205ENST00000565452 C15orf56Q8N910 161 aa5.47□□□□□ -1.53
VPS9D1-205ENST00000565452 C2orf48Q96LS8 159 aa5.47□□□□□ -1.53
VPS9D1-205ENST00000565452 MAP1LC3CQ9BXW4 147 aa5.47□□□□□ -1.53
VPS9D1-205ENST00000565452 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
VPS9D1-205ENST00000565452 H3BRM9 83 aa5.46□□□□□ -1.54
VPS9D1-205ENST00000565452 S100A6P06703 90 aa5.46□□□□□ -1.54
VPS9D1-205ENST00000565452 RPL13AP40429 203 aaKnown RBP5.46□□□□□ -1.54
VPS9D1-205ENST00000565452 C1orf137Q5JT78 98 aa5.46□□□□□ -1.54
VPS9D1-205ENST00000565452 ZC2HC1BQ5TFG8 222 aa5.46□□□□□ -1.54
VPS9D1-205ENST00000565452 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
VPS9D1-205ENST00000565452 F8VRH5 84 aa5.45□□□□□ -1.54
VPS9D1-205ENST00000565452 FABP4P15090 132 aa5.45□□□□□ -1.54
VPS9D1-205ENST00000565452 AKR1D1P51857 326 aa5.45□□□□□ -1.54
VPS9D1-205ENST00000565452 RNF151Q2KHN1 245 aa5.45□□□□□ -1.54
VPS9D1-205ENST00000565452 LINC00469Q8N7U9 141 aa5.45□□□□□ -1.54
VPS9D1-205ENST00000565452 CDKN2A-AS1Q9UH64 79 aa5.45□□□□□ -1.54
VPS9D1-205ENST00000565452 IGLV4-69A0A075B6H9 119 aa5.44□□□□□ -1.54
VPS9D1-205ENST00000565452 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
VPS9D1-205ENST00000565452 C6orf226Q5I0X4 101 aa5.44□□□□□ -1.54
VPS9D1-205ENST00000565452 Q8IZM0 81 aa5.44□□□□□ -1.54
VPS9D1-205ENST00000565452 ORAOV1Q8WV07 137 aa5.44□□□□□ -1.54
VPS9D1-205ENST00000565452 H0Y9J4 135 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 TSPAN13O95857 204 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 PRSS2P07478 247 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 PLNP26678 52 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 CXCL5P42830 114 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 SFTA2Q6UW10 78 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 PET117Q6UWS5 81 aa5.43□□□□□ -1.54
VPS9D1-205ENST00000565452 C11orf86A6NJI1 115 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 SYS1-DBNDD2H3BUS1 97 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 NDUFA1O15239 70 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 IGLV7-43P04211 117 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 S100A2P29034 98 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 KIAA0087Q14695 138 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 TMEM170BQ5T4T1 132 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 CAMK2N2Q96S95 79 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 CDIP1Q9H305 208 aa5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
VPS9D1-205ENST00000565452 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 IGLV5-39A0A0G2JS06 123 aa5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 TRBV30A0A0K0K1B3 111 aa5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 SMIM1B2RUZ4 78 aa5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 DPM2O94777 84 aa5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 ZNF22P17026 224 aaPredicted RBP5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 CKS1BP61024 79 aa5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 CARD19Q96LW7 228 aa5.41□□□□□ -1.54
VPS9D1-205ENST00000565452 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 C5orf52A6NGY3 159 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 IGKCP01834 107 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 GAGE2BQ13066 116 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 LINC01545Q5VT33 79 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 HIST3H2BBQ8N257 126 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 COX7B2Q8TF08 81 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 TOMM7Q9P0U1 55 aa5.4□□□□□ -1.54
VPS9D1-205ENST00000565452 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 TMEM223A0PJW6 202 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 C20orf202A1L168 122 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms