RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ZGRF1Q86YA3 2104 aa4.4□□□□□ -1.71
PTPN9-204ENST00000564970 NAV3Q8IVL0 2385 aa4.4□□□□□ -1.71
PTPN9-204ENST00000564970 MALRD1Q5VYJ5 2156 aa4.4□□□□□ -1.71
PTPN9-204ENST00000564970 LRBAP50851 2863 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 IGHV3OR16-9A0A0B4J2B5 98 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 K7EQD1 137 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 K7EQG2 157 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 TFF1P04155 84 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 IGHV1-2P23083 117 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 SPTSSBQ8NFR3 76 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 FAM104AQ969W3 186 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 CELA1Q9UNI1 258 aa4.39□□□□□ -1.71
PTPN9-204ENST00000564970 IGHV3-64DA0A0J9YX35 117 aa4.38□□□□□ -1.71
PTPN9-204ENST00000564970 A6NED7 52 aa4.38□□□□□ -1.71
PTPN9-204ENST00000564970 PRR9Q5T870 116 aa4.38□□□□□ -1.71
PTPN9-204ENST00000564970 IGFL3Q6UXB1 125 aa4.38□□□□□ -1.71
PTPN9-204ENST00000564970 NOTCH2NLQ7Z3S9 236 aa4.38□□□□□ -1.71
PTPN9-204ENST00000564970 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
PTPN9-204ENST00000564970 CHCHD7Q9BUK0 85 aa4.38□□□□□ -1.71
PTPN9-204ENST00000564970 ITPR2Q14571 2701 aa4.38□□□□□ -1.71
PTPN9-204ENST00000564970 ASXL3Q9C0F0 2248 aa4.37□□□□□ -1.71
PTPN9-204ENST00000564970 IGHV3-49A0A0A0MS15 119 aa4.37□□□□□ -1.71
PTPN9-204ENST00000564970 IGHV7-81A0A0B4J1V7 117 aa4.37□□□□□ -1.71
PTPN9-204ENST00000564970 IGHV3-16A0A0C4DH30 117 aa4.37□□□□□ -1.71
PTPN9-204ENST00000564970 PLA2G1BP04054 148 aaKnown RBP4.37□□□□□ -1.71
PTPN9-204ENST00000564970 LINC00242Q5T6M2 205 aa4.37□□□□□ -1.71
PTPN9-204ENST00000564970 B9D2Q9BPU9 175 aa4.37□□□□□ -1.71
PTPN9-204ENST00000564970 DOCK10Q96BY6 2186 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 UTP20O75691 2785 aaKnown RBP4.36□□□□□ -1.71
PTPN9-204ENST00000564970 ETDCA0A1B0GVM5 59 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 COX7BP24311 80 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 CCL18P55774 89 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 LINC00313P59037 77 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.36□□□□□ -1.71
PTPN9-204ENST00000564970 LINC00575Q6W349 94 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 HIGD2AQ9BW72 106 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
PTPN9-204ENST00000564970 LRRK2Q5S007 2527 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 CLPSL1A2RUU4 121 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 IGHV1-46P01743 117 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 CCL3L1P16619 93 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 LINC00158P58513 81 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 COX17Q14061 63 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 DEFB133Q30KQ1 61 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 FBXL19-AS1Q494R0 122 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 TTTY12Q9BZ98 90 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 PTPRQQ9UMZ3 2332 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 CSMD1Q96PZ7 3565 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 USP9YO00507 2555 aaPredicted RBP4.35□□□□□ -1.71
PTPN9-204ENST00000564970 OTOGQ6ZRI0 2925 aa4.35□□□□□ -1.71
PTPN9-204ENST00000564970 ARHGAP32A7KAX9 2087 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 PI4KAP42356 2102 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 PRR14LQ5THK1 2151 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 TLN1Q9Y490 2541 aaKnown RBP4.34□□□□□ -1.71
PTPN9-204ENST00000564970 LAMA1P25391 3075 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 TRGV2A0A075B6R0 118 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.34□□□□□ -1.71
PTPN9-204ENST00000564970 CCL24O00175 119 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 Q6ZTI0 123 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 LINC01356Q8N9X3 169 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 X6R8D5 127 aa4.34□□□□□ -1.71
PTPN9-204ENST00000564970 ATMQ13315 3056 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 PLXNB1O43157 2135 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 IGHV3OR16-12A0A075B7B8 117 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 IGHV4-30-2A0A087WSY4 118 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 IGHV3-35A0A0C4DH35 117 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 NDUFA4O00483 81 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 SLPIP03973 132 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 APELAP0DMC3 54 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 MINOS1Q5TGZ0 78 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 KCNQ1DNQ9H478 68 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 DPM3Q9P2X0 92 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 APC2O95996 2303 aa4.33□□□□□ -1.72
PTPN9-204ENST00000564970 CNTRLQ7Z7A1 2325 aa4.32□□□□□ -1.72
PTPN9-204ENST00000564970 SVILO95425 2214 aa4.32□□□□□ -1.72
PTPN9-204ENST00000564970 IGHV3-72A0A0B4J1Y9 119 aa4.32□□□□□ -1.72
PTPN9-204ENST00000564970 IGHV3-53P01767 116 aa4.32□□□□□ -1.72
PTPN9-204ENST00000564970 BSPH1Q075Z2 132 aa4.32□□□□□ -1.72
PTPN9-204ENST00000564970 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
PTPN9-204ENST00000564970 SPENQ96T58 3664 aaKnown RBP4.32□□□□□ -1.72
PTPN9-204ENST00000564970 PCNX1Q96RV3 2341 aa4.32□□□□□ -1.72
PTPN9-204ENST00000564970 ABCA2Q9BZC7 2435 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 PINLYPA6NC86 204 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 H3BUA1 57 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 MOBPQ13875 183 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 DEFB108BQ8NET1 73 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 LINC00467Q9BRT7 94 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 MINOS1-NBL1R4GNA1 71 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 DOPEY2Q9Y3R5 2298 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 SPG11Q96JI7 2443 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 PDZD2O15018 2839 aa4.31□□□□□ -1.72
PTPN9-204ENST00000564970 LMO4P61968 165 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms