RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CFC1P0CG37 223 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 GAGE2AQ6NT46 116 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 A8MZ25 164 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 MUSTN1Q8IVN3 82 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 C16orf95Q9H693 158 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 RPL39LQ96EH5 51 aaKnown RBP2.48□□□□□ -2.01
CHD9-213ENST00000564845 URB1-AS1Q96HZ7 61 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 STAB1Q9NY15 2570 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 PCP4P48539 62 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 C20orf203Q8NBC4 194 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 IGLV4-69A0A075B6H9 119 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 LOC107984640A0A0U1RRK4 108 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 HIST1H4AP62805 103 aaKnown RBP2.48□□□□□ -2.01
CHD9-213ENST00000564845 EGFEM1PQ0D2K5 195 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 C5orf47Q569G3 176 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 MDFIQ99750 246 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 CMYA5Q8N3K9 4069 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 PRSS29PA6NIE9 313 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 RPL35AP18077 110 aaKnown RBP2.48□□□□□ -2.01
CHD9-213ENST00000564845 NOTCH1P46531 2555 aa2.48□□□□□ -2.01
CHD9-213ENST00000564845 F5H768 121 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 GAGE12HA6NDE8 117 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 GAGE5Q13069 117 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 GAGE6Q13070 117 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 MRPL51Q4U2R6 128 aaKnown RBP2.47□□□□□ -2.01
CHD9-213ENST00000564845 SERP1Q9Y6X1 66 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 C14orf178Q8N769 122 aaPredicted RBP2.47□□□□□ -2.01
CHD9-213ENST00000564845 IGLV2-11P01706 119 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 SPINK8P0C7L1 97 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 LYPD5Q6UWN5 251 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 ZNF73O43830 326 aaPredicted RBP2.47□□□□□ -2.01
CHD9-213ENST00000564845 XCL2Q9UBD3 114 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 NOTCH3Q9UM47 2321 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 LELP1Q5T871 98 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 H7C2G1 150 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 CLPSL2Q6UWE3 100 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 Q8N3U1 123 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 M0R378 163 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 DEFB131AP59861 70 aa2.47□□□□□ -2.01
CHD9-213ENST00000564845 RPL39P62891 51 aaKnown RBP2.47□□□□□ -2.01
CHD9-213ENST00000564845 FN1P02751 2386 aaKnown RBP2.47□□□□□ -2.01
CHD9-213ENST00000564845 CRYGBP07316 175 aa2.46□□□□□ -2.01
CHD9-213ENST00000564845 REG3GQ6UW15 175 aa2.46□□□□□ -2.01
CHD9-213ENST00000564845 C11orf45Q8TAV5 145 aa2.46□□□□□ -2.01
CHD9-213ENST00000564845 KMT2CQ8NEZ4 4911 aaKnown RBP2.46□□□□□ -2.01
CHD9-213ENST00000564845 RS1O15537 224 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 CASC2Q6XLA1 102 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 ERC2-IT1O76042 136 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 C10orf25Q5T742 122 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 ZFAND2AQ8N6M9 145 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 DKK2Q9UBU2 259 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 KLLNB2CW77 178 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 LY6G6DO95868 133 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 ANKRD39Q53RE8 183 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 ZNRF2Q8NHG8 242 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 C2orf70A6NJV1 201 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 ZNF22P17026 224 aaPredicted RBP2.46□□□□□ -2.02
CHD9-213ENST00000564845 Q6YL49 198 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 C1orf195Q5TG92 126 aa2.46□□□□□ -2.02
CHD9-213ENST00000564845 AGPAT4-IT1Q9H0P7 198 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 TRBV6-8A0A0A6YYG3 113 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 LOC100131303A0A0U1RQF7 123 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 KRTAP10-3P60369 221 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 KLK9Q2XQG4 91 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 Q6ZSV7 163 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 ZNF625Q96I27 306 aaPredicted RBP2.45□□□□□ -2.02
CHD9-213ENST00000564845 U3KQK5 164 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 Q9H8V8 135 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 IGKV2D-24A0A075B6R9 120 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 TNP2Q05952 138 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 SCRT2Q9NQ03 307 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 F8P00451 2351 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 IGHV4-31P0DP07 118 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 MOBPQ13875 183 aa2.45□□□□□ -2.02
CHD9-213ENST00000564845 Q6ZUT4 128 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 Q8N9L7 120 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 CCDC179H3BU77 68 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 COX7BP24311 80 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 K7ERJ3 54 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 REG3AQ06141 175 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 NEXN-AS1Q8NBZ9 246 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 SPAG11BQ08648 103 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 HCG22E2RYF7 251 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 K7EQG2 157 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 IGLV1-40P01703 118 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 PCP2Q8IVA1 136 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 IGLL1P15814 213 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 Q6ZSN1 163 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 SPAG11AQ6PDA7 123 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 ZFAND3Q9H8U3 227 aa2.44□□□□□ -2.02
CHD9-213ENST00000564845 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 MRPL35Q9NZE8 188 aaKnown RBP2.43□□□□□ -2.02
CHD9-213ENST00000564845 A8MUN3 132 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 SERP2Q8N6R1 65 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 LINC01546A6NGU7 62 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 HAMPP81172 84 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 DEFB121Q5J5C9 76 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms