RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TEX43Q6ZNM6 134 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 Q8N8P6 123 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 MAP1LC3AQ9H492 121 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 AKR1D1P51857 326 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 KIAA0087Q14695 138 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 C10orf25Q5T742 122 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 DIRC1Q969H9 104 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 C12orf57Q99622 126 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 C6orf48Q9UBA6 75 aa7.47□□□□□ -1.21
GTF3C1-204ENST00000564664 Q6ZN92 141 aa7.46□□□□□ -1.22
GTF3C1-204ENST00000564664 VCX2Q9H322 139 aa7.46□□□□□ -1.22
GTF3C1-204ENST00000564664 CYSLTR1Q9Y271 337 aa7.46□□□□□ -1.22
GTF3C1-204ENST00000564664 LRP2P98164 4655 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 LOC389332A0A1B0GUA5 103 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 UBE2D1P51668 147 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 SEC11AP67812 179 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 PAPPA-AS1Q5QFB9 102 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 HIST3H2BBQ8N257 126 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 PACRGQ96M98 296 aaPredicted RBP7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 AMELXQ99217 191 aa7.45□□□□□ -1.22
GTF3C1-204ENST00000564664 NDUFC2-KCTD14E9PQ53 114 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 S100A2P29034 98 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 NDUFA6P56556 154 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 ODF1Q14990 250 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 GAGE2EQ4V326 116 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 C2orf66Q6UXQ4 117 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 FAM19A3Q7Z5A8 133 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 GNB1LQ9BYB4 327 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 NXT2Q9NPJ8 142 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 GAGE2DQ9UEU5 116 aa7.44□□□□□ -1.22
GTF3C1-204ENST00000564664 IGIPA6NJ69 53 aa7.43□□□□□ -1.22
GTF3C1-204ENST00000564664 PRSS2P07478 247 aa7.43□□□□□ -1.22
GTF3C1-204ENST00000564664 FAM168BA1KXE4 195 aa7.42□□□□□ -1.22
GTF3C1-204ENST00000564664 H0Y9J4 135 aa7.41□□□□□ -1.22
GTF3C1-204ENST00000564664 CKS1BP61024 79 aa7.41□□□□□ -1.22
GTF3C1-204ENST00000564664 C6orf226Q5I0X4 101 aa7.41□□□□□ -1.22
GTF3C1-204ENST00000564664 FAM19A5Q7Z5A7 132 aaPredicted RBP7.41□□□□□ -1.22
GTF3C1-204ENST00000564664 TRAPPC1Q9Y5R8 145 aa7.41□□□□□ -1.22
GTF3C1-204ENST00000564664 LINC01549A6NIU2 74 aa7.4□□□□□ -1.22
GTF3C1-204ENST00000564664 HERVK_113P63121 156 aa7.4□□□□□ -1.22
GTF3C1-204ENST00000564664 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
GTF3C1-204ENST00000564664 LINC00173Q6ZV60 143 aa7.4□□□□□ -1.22
GTF3C1-204ENST00000564664 Q8IZM0 81 aa7.4□□□□□ -1.22
GTF3C1-204ENST00000564664 TIMM17AQ99595 171 aa7.4□□□□□ -1.22
GTF3C1-204ENST00000564664 IGLV1-50A0A075B6I6 118 aa7.39□□□□□ -1.23
GTF3C1-204ENST00000564664 M0QXV9 152 aa7.39□□□□□ -1.23
GTF3C1-204ENST00000564664 UBE2BP63146 152 aa7.39□□□□□ -1.23
GTF3C1-204ENST00000564664 JOSD1Q15040 202 aaPredicted RBP7.39□□□□□ -1.23
GTF3C1-204ENST00000564664 KRTAP7-1Q8IUC3 87 aa7.39□□□□□ -1.23
GTF3C1-204ENST00000564664 HIST1H2BLQ99880 126 aa7.39□□□□□ -1.23
GTF3C1-204ENST00000564664 ALKBH7Q9BT30 221 aaPredicted RBP7.39□□□□□ -1.23
GTF3C1-204ENST00000564664 LBHQ53QV2 105 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-204ENST00000564664 PYY3Q5JQD4 70 aa7.38□□□□□ -1.23
GTF3C1-204ENST00000564664 C9orf129Q5T035 196 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-204ENST00000564664 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
GTF3C1-204ENST00000564664 GEMIN7Q9H840 131 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-204ENST00000564664 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
GTF3C1-204ENST00000564664 CXCL5P42830 114 aa7.37□□□□□ -1.23
GTF3C1-204ENST00000564664 ERASQ7Z444 233 aa7.37□□□□□ -1.23
GTF3C1-204ENST00000564664 KRTAP11-1Q8IUC1 163 aa7.37□□□□□ -1.23
GTF3C1-204ENST00000564664 TOMM7Q9P0U1 55 aa7.37□□□□□ -1.23
GTF3C1-204ENST00000564664 F8VRH5 84 aa7.36□□□□□ -1.23
GTF3C1-204ENST00000564664 LCE2BO14633 110 aa7.36□□□□□ -1.23
GTF3C1-204ENST00000564664 NUPR1O60356 82 aa7.36□□□□□ -1.23
GTF3C1-204ENST00000564664 RPL13AP40429 203 aaKnown RBP7.36□□□□□ -1.23
GTF3C1-204ENST00000564664 ZC2HC1BQ5TFG8 222 aa7.36□□□□□ -1.23
GTF3C1-204ENST00000564664 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
GTF3C1-204ENST00000564664 CDKN2A-AS1Q9UH64 79 aa7.36□□□□□ -1.23
GTF3C1-204ENST00000564664 CTAG1AP78358 180 aa7.35□□□□□ -1.23
GTF3C1-204ENST00000564664 SCGB3A1Q96QR1 104 aa7.35□□□□□ -1.23
GTF3C1-204ENST00000564664 MRPL18Q9H0U6 180 aaKnown RBP7.35□□□□□ -1.23
GTF3C1-204ENST00000564664 TP73-AS1Q9UF72 201 aa7.35□□□□□ -1.23
GTF3C1-204ENST00000564664 C22orf24Q9Y442 160 aa7.35□□□□□ -1.23
GTF3C1-204ENST00000564664 LINC01546A6NGU7 62 aa7.34□□□□□ -1.23
GTF3C1-204ENST00000564664 ZNF861PO60384 105 aa7.34□□□□□ -1.23
GTF3C1-204ENST00000564664 FABP4P15090 132 aa7.34□□□□□ -1.23
GTF3C1-204ENST00000564664 PDZD11Q5EBL8 140 aa7.34□□□□□ -1.23
GTF3C1-204ENST00000564664 TINCRA0A1B0GVN0 87 aa7.33□□□□□ -1.24
GTF3C1-204ENST00000564664 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
GTF3C1-204ENST00000564664 KIAA1644Q3SXP7 199 aa7.33□□□□□ -1.24
GTF3C1-204ENST00000564664 IGLV5-45A0A087WSX0 123 aa7.32□□□□□ -1.24
GTF3C1-204ENST00000564664 LINC00469Q8N7U9 141 aa7.32□□□□□ -1.24
GTF3C1-204ENST00000564664 MRPL55Q7Z7F7 128 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-204ENST00000564664 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
GTF3C1-204ENST00000564664 XAGE1AQ9HD64 81 aa7.31□□□□□ -1.24
GTF3C1-204ENST00000564664 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
GTF3C1-204ENST00000564664 PMVKQ15126 192 aa7.3□□□□□ -1.24
GTF3C1-204ENST00000564664 COX7B2Q8TF08 81 aa7.3□□□□□ -1.24
GTF3C1-204ENST00000564664 PCP4L1A6NKN8 68 aa7.29□□□□□ -1.24
GTF3C1-204ENST00000564664 TSTD3H0UI37 97 aa7.29□□□□□ -1.24
GTF3C1-204ENST00000564664 RPL28P46779 137 aaKnown RBP7.29□□□□□ -1.24
GTF3C1-204ENST00000564664 H3BRM9 83 aa7.28□□□□□ -1.24
GTF3C1-204ENST00000564664 BCE1O60756 84 aa7.28□□□□□ -1.24
GTF3C1-204ENST00000564664 LINC00310P59036 64 aa7.28□□□□□ -1.24
GTF3C1-204ENST00000564664 FA2HQ7L5A8 372 aa7.28□□□□□ -1.24
GTF3C1-204ENST00000564664 BAGE3Q86Y29 109 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms