RNA–Protein interactions for RNA: ENST00000563673.5

FANCA-213, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-213ENST00000563673 SMIM6P0DI80 62 aa9.48□□□□□ -0.89
FANCA-213ENST00000563673 STPG4Q8N801 248 aa9.48□□□□□ -0.89
FANCA-213ENST00000563673 SEC11AP67812 179 aa9.47□□□□□ -0.89
FANCA-213ENST00000563673 LINC01561Q8N1V8 128 aa9.47□□□□□ -0.89
FANCA-213ENST00000563673 NDUFA1O15239 70 aa9.46□□□□□ -0.89
FANCA-213ENST00000563673 PTTG1IPP53801 180 aa9.46□□□□□ -0.89
FANCA-213ENST00000563673 GAGE2BQ13066 116 aa9.46□□□□□ -0.89
FANCA-213ENST00000563673 RNF151Q2KHN1 245 aa9.46□□□□□ -0.89
FANCA-213ENST00000563673 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.89
FANCA-213ENST00000563673 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.45□□□□□ -0.9
FANCA-213ENST00000563673 HERVK_113P63121 156 aa9.45□□□□□ -0.9
FANCA-213ENST00000563673 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
FANCA-213ENST00000563673 LINC00518Q8N0U6 118 aa9.45□□□□□ -0.9
FANCA-213ENST00000563673 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
FANCA-213ENST00000563673 A0A0J9YXV3 536 aa9.45□□□□□ -0.9
FANCA-213ENST00000563673 C10orf25Q5T742 122 aa9.45□□□□□ -0.9
FANCA-213ENST00000563673 GEMIN7Q9H840 131 aaKnown RBP9.45□□□□□ -0.9
FANCA-213ENST00000563673 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
FANCA-213ENST00000563673 PYY3Q5JQD4 70 aa9.44□□□□□ -0.9
FANCA-213ENST00000563673 UNQ6190/PRO20217Q6UXQ8 127 aa9.44□□□□□ -0.9
FANCA-213ENST00000563673 C7orf33Q8WU49 177 aa9.43□□□□□ -0.9
FANCA-213ENST00000563673 CDKN2A-AS1Q9UH64 79 aa9.43□□□□□ -0.9
FANCA-213ENST00000563673 A0A096LNJ9 63 aa9.42□□□□□ -0.9
FANCA-213ENST00000563673 PMCHL1Q16048 86 aa9.42□□□□□ -0.9
FANCA-213ENST00000563673 C12orf57Q99622 126 aa9.42□□□□□ -0.9
FANCA-213ENST00000563673 CST9LQ9H4G1 147 aa9.42□□□□□ -0.9
FANCA-213ENST00000563673 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
FANCA-213ENST00000563673 JOSD1Q15040 202 aaPredicted RBP9.42□□□□□ -0.9
FANCA-213ENST00000563673 PMVKQ15126 192 aa9.42□□□□□ -0.9
FANCA-213ENST00000563673 TINCRA0A1B0GVN0 87 aa9.41□□□□□ -0.9
FANCA-213ENST00000563673 HBDP02042 147 aa9.41□□□□□ -0.9
FANCA-213ENST00000563673 PRSS2P07478 247 aa9.41□□□□□ -0.9
FANCA-213ENST00000563673 C2orf82Q6UX34 121 aa9.41□□□□□ -0.9
FANCA-213ENST00000563673 LINC00469Q8N7U9 141 aa9.41□□□□□ -0.9
FANCA-213ENST00000563673 TOMM7Q9P0U1 55 aa9.41□□□□□ -0.9
FANCA-213ENST00000563673 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
FANCA-213ENST00000563673 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
FANCA-213ENST00000563673 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
FANCA-213ENST00000563673 Q8IZM0 81 aa9.39□□□□□ -0.91
FANCA-213ENST00000563673 IGLV5-45A0A087WSX0 123 aa9.39□□□□□ -0.91
FANCA-213ENST00000563673 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
FANCA-213ENST00000563673 LEPROTL1O95214 131 aa9.39□□□□□ -0.91
FANCA-213ENST00000563673 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
FANCA-213ENST00000563673 CKS1BP61024 79 aa9.39□□□□□ -0.91
FANCA-213ENST00000563673 Q6ZRP5 223 aa9.39□□□□□ -0.91
FANCA-213ENST00000563673 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
FANCA-213ENST00000563673 C3orf79P0CE67 100 aa9.38□□□□□ -0.91
FANCA-213ENST00000563673 KRTDAPP60985 99 aa9.37□□□□□ -0.91
FANCA-213ENST00000563673 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
FANCA-213ENST00000563673 HSPB8Q9UJY1 196 aa9.37□□□□□ -0.91
FANCA-213ENST00000563673 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
FANCA-213ENST00000563673 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
FANCA-213ENST00000563673 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
FANCA-213ENST00000563673 KRTAP29-1A8MX34 341 aaPredicted RBP9.36□□□□□ -0.91
FANCA-213ENST00000563673 ATP5LO75964 103 aa9.36□□□□□ -0.91
FANCA-213ENST00000563673 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
FANCA-213ENST00000563673 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
FANCA-213ENST00000563673 J3QL48 77 aa9.35□□□□□ -0.91
FANCA-213ENST00000563673 LRP1Q07954 4544 aaKnown RBP9.34□□□□□ -0.91
FANCA-213ENST00000563673 HERC1Q15751 4861 aa9.34□□□□□ -0.91
FANCA-213ENST00000563673 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
FANCA-213ENST00000563673 CXCL5P42830 114 aa9.34□□□□□ -0.91
FANCA-213ENST00000563673 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
FANCA-213ENST00000563673 F8VRH5 84 aa9.33□□□□□ -0.92
FANCA-213ENST00000563673 H3BRM9 83 aa9.33□□□□□ -0.92
FANCA-213ENST00000563673 SYS1-DBNDD2H3BUS1 97 aa9.33□□□□□ -0.92
FANCA-213ENST00000563673 SPINK8P0C7L1 97 aa9.33□□□□□ -0.92
FANCA-213ENST00000563673 COX7B2Q8TF08 81 aa9.33□□□□□ -0.92
FANCA-213ENST00000563673 PKHD1L1Q86WI1 4243 aa9.33□□□□□ -0.92
FANCA-213ENST00000563673 MAP1LC3CQ9BXW4 147 aa9.32□□□□□ -0.92
FANCA-213ENST00000563673 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
FANCA-213ENST00000563673 OXTP01178 125 aa9.31□□□□□ -0.92
FANCA-213ENST00000563673 PET117Q6UWS5 81 aa9.31□□□□□ -0.92
FANCA-213ENST00000563673 PHF5AQ7RTV0 110 aaKnown RBP9.31□□□□□ -0.92
FANCA-213ENST00000563673 FAT3Q8TDW7 4589 aa9.3□□□□□ -0.92
FANCA-213ENST00000563673 ZNF22P17026 224 aaPredicted RBP9.3□□□□□ -0.92
FANCA-213ENST00000563673 IFI27L1Q96BM0 104 aa9.3□□□□□ -0.92
FANCA-213ENST00000563673 S100A12P80511 92 aa9.29□□□□□ -0.92
FANCA-213ENST00000563673 C9orf129Q5T035 196 aaKnown RBP9.29□□□□□ -0.92
FANCA-213ENST00000563673 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
FANCA-213ENST00000563673 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
FANCA-213ENST00000563673 C20orf202A1L168 122 aa9.28□□□□□ -0.92
FANCA-213ENST00000563673 C11orf86A6NJI1 115 aa9.28□□□□□ -0.92
FANCA-213ENST00000563673 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
FANCA-213ENST00000563673 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
FANCA-213ENST00000563673 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
FANCA-213ENST00000563673 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
FANCA-213ENST00000563673 TRAV12-1A0A0B4J245 112 aa9.26□□□□□ -0.93
FANCA-213ENST00000563673 XAGE1AQ9HD64 81 aa9.26□□□□□ -0.93
FANCA-213ENST00000563673 PSORS1C2Q9UIG4 136 aa9.26□□□□□ -0.93
FANCA-213ENST00000563673 H0Y8G0 127 aa9.26□□□□□ -0.93
FANCA-213ENST00000563673 M0QXV9 152 aa9.26□□□□□ -0.93
FANCA-213ENST00000563673 SPINK6Q6UWN8 80 aa9.24□□□□□ -0.93
FANCA-213ENST00000563673 VAMP8Q9BV40 100 aa9.24□□□□□ -0.93
FANCA-213ENST00000563673 C1orf137Q5JT78 98 aa9.23□□□□□ -0.93
FANCA-213ENST00000563673 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
FANCA-213ENST00000563673 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.935e-8■■■■□ 26
FANCA-213ENST00000563673 ODF1Q14990 250 aa9.23□□□□□ -0.93
FANCA-213ENST00000563673 SERTAD4-AS1Q5TG53 156 aa9.23□□□□□ -0.93
FANCA-213ENST00000563673 KRTAP11-1Q8IUC1 163 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms