RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.77
HDGFL3-203ENST00000563404 COA6Q5JTJ3 125 aaKnown RBP10.21□□□□□ -0.77
HDGFL3-203ENST00000563404 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
HDGFL3-203ENST00000563404 ERASQ7Z444 233 aa10.21□□□□□ -0.77
HDGFL3-203ENST00000563404 TIMM17AQ99595 171 aa10.21□□□□□ -0.77
HDGFL3-203ENST00000563404 FAM168BA1KXE4 195 aa10.2□□□□□ -0.78
HDGFL3-203ENST00000563404 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
HDGFL3-203ENST00000563404 PRR26Q8N8Z3 221 aa10.2□□□□□ -0.78
HDGFL3-203ENST00000563404 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
HDGFL3-203ENST00000563404 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
HDGFL3-203ENST00000563404 HBDP02042 147 aa10.19□□□□□ -0.78
HDGFL3-203ENST00000563404 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
HDGFL3-203ENST00000563404 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-203ENST00000563404 IGHV3OR16-9A0A0B4J2B5 98 aa10.18□□□□□ -0.78
HDGFL3-203ENST00000563404 HSBP1O75506 76 aa10.18□□□□□ -0.78
HDGFL3-203ENST00000563404 SERF1AO75920 110 aa10.18□□□□□ -0.78
HDGFL3-203ENST00000563404 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
HDGFL3-203ENST00000563404 A0A096LNJ9 63 aa10.17□□□□□ -0.78
HDGFL3-203ENST00000563404 PDZD11Q5EBL8 140 aa10.17□□□□□ -0.78
HDGFL3-203ENST00000563404 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
HDGFL3-203ENST00000563404 SCGB3A1Q96QR1 104 aa10.17□□□□□ -0.78
HDGFL3-203ENST00000563404 MUC2Q02817 5179 aa10.16□□□□□ -0.78
HDGFL3-203ENST00000563404 IGLV4-3A0A075B6K6 122 aa10.16□□□□□ -0.78
HDGFL3-203ENST00000563404 ATP5LO75964 103 aa10.16□□□□□ -0.78
HDGFL3-203ENST00000563404 LINC00310P59036 64 aa10.16□□□□□ -0.78
HDGFL3-203ENST00000563404 UNQ6190/PRO20217Q6UXQ8 127 aa10.16□□□□□ -0.78
HDGFL3-203ENST00000563404 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
HDGFL3-203ENST00000563404 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
HDGFL3-203ENST00000563404 Q6ZN92 141 aa10.15□□□□□ -0.78
HDGFL3-203ENST00000563404 DIRC1Q969H9 104 aa10.15□□□□□ -0.78
HDGFL3-203ENST00000563404 AMELXQ99217 191 aa10.15□□□□□ -0.78
HDGFL3-203ENST00000563404 VCX2Q9H322 139 aa10.15□□□□□ -0.78
HDGFL3-203ENST00000563404 A0A087WZ39 114 aa10.14□□□□□ -0.79
HDGFL3-203ENST00000563404 F8WDY8 70 aa10.14□□□□□ -0.79
HDGFL3-203ENST00000563404 H0Y9J4 135 aa10.14□□□□□ -0.79
HDGFL3-203ENST00000563404 NDUFA1O15239 70 aa10.14□□□□□ -0.79
HDGFL3-203ENST00000563404 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
HDGFL3-203ENST00000563404 PACRGQ96M98 296 aaPredicted RBP10.14□□□□□ -0.79
HDGFL3-203ENST00000563404 NUPR1O60356 82 aa10.13□□□□□ -0.79
HDGFL3-203ENST00000563404 KRTAP1-4P0C5Y4 121 aa10.13□□□□□ -0.79
HDGFL3-203ENST00000563404 TEX43Q6ZNM6 134 aa10.13□□□□□ -0.79
HDGFL3-203ENST00000563404 IFITM10A6NMD0 228 aa10.12□□□□□ -0.79
HDGFL3-203ENST00000563404 KIAA0087Q14695 138 aa10.12□□□□□ -0.79
HDGFL3-203ENST00000563404 GAGE2EQ4V326 116 aa10.12□□□□□ -0.79
HDGFL3-203ENST00000563404 C2orf88Q9BSF0 95 aa10.12□□□□□ -0.79
HDGFL3-203ENST00000563404 GAGE2DQ9UEU5 116 aa10.12□□□□□ -0.79
HDGFL3-203ENST00000563404 NDUFA6P56556 154 aa10.11□□□□□ -0.79
HDGFL3-203ENST00000563404 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
HDGFL3-203ENST00000563404 FAM19A3Q7Z5A8 133 aa10.11□□□□□ -0.79
HDGFL3-203ENST00000563404 FAM19A2Q8N3H0 131 aa10.11□□□□□ -0.79
HDGFL3-203ENST00000563404 LEPROTL1O95214 131 aa10.1□□□□□ -0.79
HDGFL3-203ENST00000563404 SEC11AP67812 179 aa10.1□□□□□ -0.79
HDGFL3-203ENST00000563404 PMVKQ15126 192 aa10.1□□□□□ -0.79
HDGFL3-203ENST00000563404 HSPB8Q9UJY1 196 aa10.1□□□□□ -0.79
HDGFL3-203ENST00000563404 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
HDGFL3-203ENST00000563404 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
HDGFL3-203ENST00000563404 CST9LQ9H4G1 147 aa10.09□□□□□ -0.79
HDGFL3-203ENST00000563404 UBE2D1P51668 147 aa10.08□□□□□ -0.8
HDGFL3-203ENST00000563404 LINC00242Q5T6M2 205 aa10.08□□□□□ -0.8
HDGFL3-203ENST00000563404 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
HDGFL3-203ENST00000563404 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
HDGFL3-203ENST00000563404 M0QXV9 152 aa10.07□□□□□ -0.8
HDGFL3-203ENST00000563404 S100A6P06703 90 aa10.07□□□□□ -0.8
HDGFL3-203ENST00000563404 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
HDGFL3-203ENST00000563404 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
HDGFL3-203ENST00000563404 UBE2BP63146 152 aa10.05□□□□□ -0.8
HDGFL3-203ENST00000563404 LINC01561Q8N1V8 128 aa10.05□□□□□ -0.8
HDGFL3-203ENST00000563404 TRBV30A0A0K0K1B3 111 aa10.04□□□□□ -0.8
HDGFL3-203ENST00000563404 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
HDGFL3-203ENST00000563404 HERVK_113P63121 156 aa10.04□□□□□ -0.8
HDGFL3-203ENST00000563404 NDUFC2-KCTD14E9PQ53 114 aa10.03□□□□□ -0.8
HDGFL3-203ENST00000563404 FABP4P15090 132 aa10.03□□□□□ -0.8
HDGFL3-203ENST00000563404 ZC2HC1BQ5TFG8 222 aa10.03□□□□□ -0.8
HDGFL3-203ENST00000563404 MAP1LC3CQ9BXW4 147 aa10.03□□□□□ -0.8
HDGFL3-203ENST00000563404 C5orf52A6NGY3 159 aa10.02□□□□□ -0.81
HDGFL3-203ENST00000563404 HIST3H2BBQ8N257 126 aa10.02□□□□□ -0.81
HDGFL3-203ENST00000563404 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
HDGFL3-203ENST00000563404 IGLC3P0DOY3 106 aa10.01□□□□□ -0.81
HDGFL3-203ENST00000563404 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-203ENST00000563404 PRR4Q16378 134 aa10□□□□□ -0.81
HDGFL3-203ENST00000563404 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
HDGFL3-203ENST00000563404 F8VRH5 84 aa9.99□□□□□ -0.81
HDGFL3-203ENST00000563404 S100A2P29034 98 aa9.99□□□□□ -0.81
HDGFL3-203ENST00000563404 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
HDGFL3-203ENST00000563404 PET117Q6UWS5 81 aa9.99□□□□□ -0.81
HDGFL3-203ENST00000563404 SYS1-DBNDD2H3BUS1 97 aa9.98□□□□□ -0.81
HDGFL3-203ENST00000563404 ZNF861PO60384 105 aa9.98□□□□□ -0.81
HDGFL3-203ENST00000563404 RPL13AP40429 203 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-203ENST00000563404 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
HDGFL3-203ENST00000563404 HIST1H2BLQ99880 126 aa9.98□□□□□ -0.81
HDGFL3-203ENST00000563404 AKR1D1P51857 326 aa9.97□□□□□ -0.81
HDGFL3-203ENST00000563404 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
HDGFL3-203ENST00000563404 C22orf24Q9Y442 160 aa9.97□□□□□ -0.81
HDGFL3-203ENST00000563404 H3BRM9 83 aa9.96□□□□□ -0.82
HDGFL3-203ENST00000563404 C3orf79P0CE67 100 aa9.95□□□□□ -0.82
HDGFL3-203ENST00000563404 PLNP26678 52 aa9.95□□□□□ -0.82
HDGFL3-203ENST00000563404 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
HDGFL3-203ENST00000563404 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
HDGFL3-203ENST00000563404 LINC01545Q5VT33 79 aa9.94□□□□□ -0.82
HDGFL3-203ENST00000563404 C11orf86A6NJI1 115 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms