RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LECT2O14960 151 aa9.99□□□□□ -0.81
GTF3C1-203ENST00000562609 HTN1P15515 57 aa9.99□□□□□ -0.81
GTF3C1-203ENST00000562609 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
GTF3C1-203ENST00000562609 SMIM11BQ8TCY0 68 aa9.99□□□□□ -0.81
GTF3C1-203ENST00000562609 PF4P02776 101 aa9.99□□□□□ -0.81
GTF3C1-203ENST00000562609 SLPIP03973 132 aa9.99□□□□□ -0.81
GTF3C1-203ENST00000562609 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
GTF3C1-203ENST00000562609 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
GTF3C1-203ENST00000562609 LINC00242Q5T6M2 205 aa9.98□□□□□ -0.81
GTF3C1-203ENST00000562609 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-203ENST00000562609 A0A1W2PRX2 142 aa9.98□□□□□ -0.81
GTF3C1-203ENST00000562609 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 TMEM89A2RUT3 159 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 SNRPD3P62318 126 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 ANK3Q12955 4377 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 HIVEP2P31629 2446 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 K7EQG2 157 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 SEC61GP60059 68 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 Q6ZSN1 163 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 J3QKU1 62 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 CCKP06307 115 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
GTF3C1-203ENST00000562609 SMIM26A0A096LP01 95 aa9.96□□□□□ -0.81
GTF3C1-203ENST00000562609 A0A0U1RQV1 116 aa9.96□□□□□ -0.81
GTF3C1-203ENST00000562609 DNAJC9-AS1A6NH13 148 aa9.96□□□□□ -0.81
GTF3C1-203ENST00000562609 PRM2P04554 102 aa9.96□□□□□ -0.81
GTF3C1-203ENST00000562609 S100A7L2Q5SY68 101 aa9.96□□□□□ -0.82
GTF3C1-203ENST00000562609 LYPD5Q6UWN5 251 aa9.96□□□□□ -0.82
GTF3C1-203ENST00000562609 FN1P02751 2386 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-203ENST00000562609 H0YGX0 51 aa9.95□□□□□ -0.82
GTF3C1-203ENST00000562609 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
GTF3C1-203ENST00000562609 BRK1Q8WUW1 75 aa9.95□□□□□ -0.82
GTF3C1-203ENST00000562609 OTOGQ6ZRI0 2925 aa9.94□□□□□ -0.82
GTF3C1-203ENST00000562609 RPL36AP83881 106 aaKnown RBP9.94□□□□□ -0.82
GTF3C1-203ENST00000562609 ATP5EP2Q5VTU8 51 aa9.94□□□□□ -0.82
GTF3C1-203ENST00000562609 RPL36ALQ969Q0 106 aaKnown RBP9.94□□□□□ -0.82
GTF3C1-203ENST00000562609 V9GYY9 64 aa9.94□□□□□ -0.82
GTF3C1-203ENST00000562609 SMR3AQ99954 134 aa9.94□□□□□ -0.82
GTF3C1-203ENST00000562609 DEFB131AP59861 70 aa9.93□□□□□ -0.82
GTF3C1-203ENST00000562609 SS18Q15532 418 aa9.93□□□□□ -0.82
GTF3C1-203ENST00000562609 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
GTF3C1-203ENST00000562609 SNURFQ9Y675 71 aa9.92□□□□□ -0.82
GTF3C1-203ENST00000562609 C1orf195Q5TG92 126 aa9.92□□□□□ -0.82
GTF3C1-203ENST00000562609 KRTAP1-1Q07627 177 aa9.92□□□□□ -0.82
GTF3C1-203ENST00000562609 ORMDL1Q9P0S3 153 aa9.92□□□□□ -0.82
GTF3C1-203ENST00000562609 TRAV7A0A075B6U4 112 aa9.9□□□□□ -0.82
GTF3C1-203ENST00000562609 RMI2Q96E14 147 aa9.9□□□□□ -0.82
GTF3C1-203ENST00000562609 F8WEM9 126 aa9.89□□□□□ -0.83
GTF3C1-203ENST00000562609 C4orf3Q8WVX3 66 aa9.89□□□□□ -0.83
GTF3C1-203ENST00000562609 C2CD3Q4AC94 2353 aa9.89□□□□□ -0.83
GTF3C1-203ENST00000562609 RBM3P98179 157 aaKnown RBP9.89□□□□□ -0.83
GTF3C1-203ENST00000562609 KLKP1Q107X0 134 aa9.89□□□□□ -0.83
GTF3C1-203ENST00000562609 DYNLRB2Q8TF09 96 aa9.88□□□□□ -0.83
GTF3C1-203ENST00000562609 UBL5Q9BZL1 73 aa9.88□□□□□ -0.83
GTF3C1-203ENST00000562609 TRBV7-6A0A0J9YX20 115 aa9.88□□□□□ -0.83
GTF3C1-203ENST00000562609 C11orf72Q8NBR9 251 aa9.88□□□□□ -0.83
GTF3C1-203ENST00000562609 TRBV10-3A0A0K0K1G6 114 aa9.87□□□□□ -0.83
GTF3C1-203ENST00000562609 LINC00158P58513 81 aa9.87□□□□□ -0.83
GTF3C1-203ENST00000562609 VWFP04275 2813 aa9.87□□□□□ -0.83
GTF3C1-203ENST00000562609 CCL18P55774 89 aa9.86□□□□□ -0.83
GTF3C1-203ENST00000562609 JMJD7-PLA2G4BH0Y9G9 81 aa9.85□□□□□ -0.83
GTF3C1-203ENST00000562609 TOMM7Q9P0U1 55 aa9.85□□□□□ -0.83
GTF3C1-203ENST00000562609 DEFB114Q30KQ6 69 aa9.85□□□□□ -0.83
GTF3C1-203ENST00000562609 LINC01006Q8NI28 216 aa9.85□□□□□ -0.83
GTF3C1-203ENST00000562609 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
GTF3C1-203ENST00000562609 MAP6D1Q9H9H5 199 aa9.84□□□□□ -0.83
GTF3C1-203ENST00000562609 TRAV10A0A0B4J240 114 aa9.84□□□□□ -0.83
GTF3C1-203ENST00000562609 PAX4O43316 350 aa9.84□□□□□ -0.83
GTF3C1-203ENST00000562609 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
GTF3C1-203ENST00000562609 Q6ZTI0 123 aa9.84□□□□□ -0.83
GTF3C1-203ENST00000562609 CCL24O00175 119 aa9.83□□□□□ -0.84
GTF3C1-203ENST00000562609 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
GTF3C1-203ENST00000562609 RNASE1P07998 156 aaKnown RBP9.82□□□□□ -0.84
GTF3C1-203ENST00000562609 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
GTF3C1-203ENST00000562609 FLNBO75369 2602 aaKnown RBP9.82□□□□□ -0.84
GTF3C1-203ENST00000562609 BCE1O60756 84 aa9.82□□□□□ -0.84
GTF3C1-203ENST00000562609 NSD1Q96L73 2696 aaPredicted RBP9.82□□□□□ -0.84
GTF3C1-203ENST00000562609 NBEAL2Q6ZNJ1 2754 aa9.81□□□□□ -0.84
GTF3C1-203ENST00000562609 HIVEP1P15822 2718 aa9.81□□□□□ -0.84
GTF3C1-203ENST00000562609 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
GTF3C1-203ENST00000562609 MPLKIPQ8TAP9 179 aa9.8□□□□□ -0.84
GTF3C1-203ENST00000562609 ODF3L2Q3SX64 289 aa9.8□□□□□ -0.84
GTF3C1-203ENST00000562609 CDC42SE2Q9NRR3 84 aa9.8□□□□□ -0.84
GTF3C1-203ENST00000562609 ATRQ13535 2644 aa9.79□□□□□ -0.84
GTF3C1-203ENST00000562609 TMEM256-PLSCR3K7ERE1 68 aa9.79□□□□□ -0.84
GTF3C1-203ENST00000562609 HAMPP81172 84 aa9.79□□□□□ -0.84
GTF3C1-203ENST00000562609 WFDC10AQ9H1F0 79 aa9.79□□□□□ -0.84
GTF3C1-203ENST00000562609 LINC01547P58512 204 aaPredicted RBP9.77□□□□□ -0.85
GTF3C1-203ENST00000562609 Q8N814 137 aa9.77□□□□□ -0.85
GTF3C1-203ENST00000562609 LINC00167Q96N53 147 aa9.77□□□□□ -0.85
GTF3C1-203ENST00000562609 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.85
GTF3C1-203ENST00000562609 FAM229BQ4G0N7 80 aa9.77□□□□□ -0.85
GTF3C1-203ENST00000562609 NTM-AS1Q6ZSK4 140 aa9.77□□□□□ -0.85
GTF3C1-203ENST00000562609 IGKV3OR2-268A0A0C4DH90 116 aa9.76□□□□□ -0.85
GTF3C1-203ENST00000562609 NDUFC1O43677 76 aa9.76□□□□□ -0.85
GTF3C1-203ENST00000562609 TM2D3Q9BRN9 247 aa9.75□□□□□ -0.85
GTF3C1-203ENST00000562609 STHQ8IWL8 128 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms