RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 RASL11AQ6T310 242 aa2.97□□□□□ -1.93
UBR1-203ENST00000562173 AKR1C3P42330 323 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 UBE2BP63146 152 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 SPAG11BQ08648 103 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 ASB16-AS1Q495Z4 193 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 AMMECR1LQ6DCA0 310 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 Q6ZUT4 128 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 LINC00173Q6ZV60 143 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 MRPL55Q7Z7F7 128 aaKnown RBP2.96□□□□□ -1.94
UBR1-203ENST00000562173 KCNIP2Q9NS61 270 aa2.96□□□□□ -1.94
UBR1-203ENST00000562173 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
UBR1-203ENST00000562173 TRAV13-1A0A0B4J241 112 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 A0A1W2PRE2 83 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 UPK1BO75841 260 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 CXorf1O96002 111 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 UBE2G1P62253 170 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 LYZL1Q6UWQ5 148 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 FAM19A1Q7Z5A9 133 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 SLC7A5P1Q8MH63 180 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 AP1S3Q96PC3 154 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 NIT2Q9NQR4 276 aa2.95□□□□□ -1.94
UBR1-203ENST00000562173 SMIM17P0DL12 118 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 PKIAP61925 76 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 TMEM97Q5BJF2 176 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 TEX43Q6ZNM6 134 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 DAND5Q8N907 189 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 LINC00304Q8N9R0 145 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 XAGE1AQ9HD64 81 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 CDC42SE2Q9NRR3 84 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 TMEM167BQ9NRX6 74 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 LINC00474Q9P2X8 69 aa2.94□□□□□ -1.94
UBR1-203ENST00000562173 IGHV3OR16-9A0A0B4J2B5 98 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 MAP1LC3B2A6NCE7 125 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 SDHAF1A6NFY7 115 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 NCR2O95944 276 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 APCSP02743 223 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 ESDP10768 282 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 CEBPGP53567 150 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 CCL20P78556 96 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 CD164Q04900 197 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 KIAA0087Q14695 138 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 COA6Q5JTJ3 125 aaKnown RBP2.93□□□□□ -1.94
UBR1-203ENST00000562173 BAGE2Q86Y30 109 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 OR2D3Q8NGH3 330 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 ORAOV1Q8WV07 137 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 DEDD2Q8WXF8 326 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 FMC1Q96HJ9 113 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 MAP1LC3BQ9GZQ8 125 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 SPANXB1Q9NS25 103 aaPredicted RBP2.93□□□□□ -1.94
UBR1-203ENST00000562173 ZFP30Q9Y2G7 519 aa2.93□□□□□ -1.94
UBR1-203ENST00000562173 TRBV20OR9-2A0A075B6H5 130 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 CTXND1A0A1B0GTU2 59 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 COX7A2LO14548 114 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 HERVK_113P61574 105 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 PRLHP81277 87 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 EIF5AL1Q6IS14 154 aaKnown RBP2.92□□□□□ -1.94
UBR1-203ENST00000562173 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 SMDT1Q9H4I9 107 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 BATF3Q9NR55 127 aa2.92□□□□□ -1.94
UBR1-203ENST00000562173 CARHSP1Q9Y2V2 147 aaKnown RBP2.92□□□□□ -1.94
UBR1-203ENST00000562173 FAM240AA0A1B0GVK7 77 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 C19orf71A6NCJ1 209 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 G3V3Q6 166 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 GIPP09681 153 aaPredicted RBP2.91□□□□□ -1.94
UBR1-203ENST00000562173 RPL39P62891 51 aaKnown RBP2.91□□□□□ -1.94
UBR1-203ENST00000562173 COX19Q49B96 90 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 CENPWQ5EE01 88 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.91□□□□□ -1.94
UBR1-203ENST00000562173 HIST1H2BAQ96A08 127 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 PSMG3Q9BT73 122 aaPredicted RBP2.91□□□□□ -1.94
UBR1-203ENST00000562173 CYTL1Q9NRR1 136 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 C22orf24Q9Y442 160 aa2.91□□□□□ -1.94
UBR1-203ENST00000562173 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
UBR1-203ENST00000562173 SSNA1O43805 119 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 CXCL1P09341 107 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 RPL35P42766 123 aaKnown RBP2.9□□□□□ -1.95
UBR1-203ENST00000562173 PCOTHQ58A44 107 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
UBR1-203ENST00000562173 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 STOML3Q8TAV4 291 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 TSKUQ8WUA8 353 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 MARVELD1Q9BSK0 173 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 TNFSF18Q9UNG2 199 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 UBE2D4Q9Y2X8 147 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 ALG5Q9Y673 324 aa2.9□□□□□ -1.95
UBR1-203ENST00000562173 TCAPO15273 167 aa2.89□□□□□ -1.95
UBR1-203ENST00000562173 PDZD11Q5EBL8 140 aa2.89□□□□□ -1.95
UBR1-203ENST00000562173 LINC01551Q86U37 167 aa2.89□□□□□ -1.95
UBR1-203ENST00000562173 Q8NDZ9 215 aa2.89□□□□□ -1.95
UBR1-203ENST00000562173 MRPL35Q9NZE8 188 aaKnown RBP2.89□□□□□ -1.95
UBR1-203ENST00000562173 TMEM238C9JI98 176 aa2.88□□□□□ -1.95
UBR1-203ENST00000562173 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
UBR1-203ENST00000562173 I3L3M4 83 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 M0R2T5 61 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 NDUFA1O15239 70 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 BCE1O60756 84 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 POLR2KP53803 58 aaKnown RBP2.87□□□□□ -1.95
UBR1-203ENST00000562173 AMN1Q8IY45 258 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms