RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 MXRA5Q9NR99 2828 aa13.15□□□□□ -0.3
BBS4-204ENST00000562084 IGKV3D-7A0A0C4DH55 119 aa13.14□□□□□ -0.31
BBS4-204ENST00000562084 USP17L23D6RBM5 183 aa13.14□□□□□ -0.31
BBS4-204ENST00000562084 LECT2O14960 151 aa13.14□□□□□ -0.31
BBS4-204ENST00000562084 TEP1Q99973 2627 aaKnown RBP13.14□□□□□ -0.31
BBS4-204ENST00000562084 JMJD7-PLA2G4BH0Y9G9 81 aa13.14□□□□□ -0.31
BBS4-204ENST00000562084 CCKP06307 115 aa13.14□□□□□ -0.31
BBS4-204ENST00000562084 STHQ8IWL8 128 aa13.14□□□□□ -0.31
BBS4-204ENST00000562084 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
BBS4-204ENST00000562084 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
BBS4-204ENST00000562084 NSD1Q96L73 2696 aaPredicted RBP13.13□□□□□ -0.31
BBS4-204ENST00000562084 TRBV6-4A0A1B0GX49 114 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 DEFB136Q30KP8 78 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 LINC01561Q8N1V8 128 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 DPH3Q96FX2 82 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 MTORP42345 2549 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 A0A087WZ39 114 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 C9orf129Q5T035 196 aaKnown RBP13.12□□□□□ -0.31
BBS4-204ENST00000562084 Q6ZTI0 123 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
BBS4-204ENST00000562084 NDUFC2-KCTD14E9PQ53 114 aa13.11□□□□□ -0.31
BBS4-204ENST00000562084 SORL1Q92673 2214 aa13.11□□□□□ -0.31
BBS4-204ENST00000562084 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
BBS4-204ENST00000562084 FSHBP01225 129 aa13.1□□□□□ -0.31
BBS4-204ENST00000562084 NCR3O14931 201 aa13.09□□□□□ -0.31
BBS4-204ENST00000562084 PAX4O43316 350 aa13.09□□□□□ -0.31
BBS4-204ENST00000562084 ODF3L2Q3SX64 289 aa13.09□□□□□ -0.31
BBS4-204ENST00000562084 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
BBS4-204ENST00000562084 TRBV10-3A0A0K0K1G6 114 aa13.08□□□□□ -0.32
BBS4-204ENST00000562084 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
BBS4-204ENST00000562084 C11orf44Q8N8P7 122 aa13.08□□□□□ -0.32
BBS4-204ENST00000562084 FN1P02751 2386 aaKnown RBP13.08□□□□□ -0.32
BBS4-204ENST00000562084 A0A1W2PRX2 142 aa13.08□□□□□ -0.32
BBS4-204ENST00000562084 WIPF1O43516 503 aa13.07□□□□□ -0.32
BBS4-204ENST00000562084 NDUFC2O95298 119 aa13.07□□□□□ -0.32
BBS4-204ENST00000562084 C16orf74Q96GX8 76 aa13.06□□□□□ -0.32
BBS4-204ENST00000562084 TMEM256-PLSCR3K7ERE1 68 aa13.06□□□□□ -0.32
BBS4-204ENST00000562084 CMC4P56277 68 aaPredicted RBP13.06□□□□□ -0.32
BBS4-204ENST00000562084 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
BBS4-204ENST00000562084 TMEM86BQ8N661 226 aa13.06□□□□□ -0.32
BBS4-204ENST00000562084 NIPBLQ6KC79 2804 aaeCLIP13.05□□□□□ -0.32
BBS4-204ENST00000562084 A0A087WVE0 104 aa13.05□□□□□ -0.32
BBS4-204ENST00000562084 SS18Q15532 418 aa13.05□□□□□ -0.32
BBS4-204ENST00000562084 CYSTM1Q9H1C7 97 aa13.05□□□□□ -0.32
BBS4-204ENST00000562084 ZFHX3Q15911 3703 aa13.05□□□□□ -0.32
BBS4-204ENST00000562084 BCE1O60756 84 aa13.04□□□□□ -0.32
BBS4-204ENST00000562084 TRBV6-8A0A0A6YYG3 113 aa13.04□□□□□ -0.32
BBS4-204ENST00000562084 PFN2P35080 140 aa13.03□□□□□ -0.32
BBS4-204ENST00000562084 NOP10Q9NPE3 64 aaKnown RBP13.03□□□□□ -0.32
BBS4-204ENST00000562084 TRGV2A0A075B6R0 118 aa13.01□□□□□ -0.33
BBS4-204ENST00000562084 Q8N814 137 aa13.01□□□□□ -0.33
BBS4-204ENST00000562084 IGLV4-60A0A075B6I1 120 aa13□□□□□ -0.33
BBS4-204ENST00000562084 SLPIP03973 132 aa13□□□□□ -0.33
BBS4-204ENST00000562084 C6orf226Q5I0X4 101 aa13□□□□□ -0.33
BBS4-204ENST00000562084 Q8IZM0 81 aa13□□□□□ -0.33
BBS4-204ENST00000562084 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
BBS4-204ENST00000562084 KIR2DL5BQ8NHK3 375 aa12.99□□□□□ -0.33
BBS4-204ENST00000562084 TRGV4A0A0C4DH28 118 aa12.99□□□□□ -0.33
BBS4-204ENST00000562084 GHRHP01286 108 aa12.99□□□□□ -0.33
BBS4-204ENST00000562084 UBL5Q9BZL1 73 aa12.99□□□□□ -0.33
BBS4-204ENST00000562084 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
BBS4-204ENST00000562084 IGKV3OR2-268A0A0C4DH90 116 aa12.97□□□□□ -0.33
BBS4-204ENST00000562084 PLAC8L1A1L4L8 177 aa12.97□□□□□ -0.33
BBS4-204ENST00000562084 CUBNO60494 3623 aa12.97□□□□□ -0.33
BBS4-204ENST00000562084 LOC100131303A0A0U1RQF7 123 aa12.96□□□□□ -0.33
BBS4-204ENST00000562084 COX17Q14061 63 aa12.96□□□□□ -0.33
BBS4-204ENST00000562084 SETD2Q9BYW2 2564 aaPredicted RBP12.96□□□□□ -0.34
BBS4-204ENST00000562084 DSCR8Q96T75 97 aa12.95□□□□□ -0.34
BBS4-204ENST00000562084 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
BBS4-204ENST00000562084 FHL2Q14192 279 aa12.93□□□□□ -0.34
BBS4-204ENST00000562084 NF1P21359 2839 aa12.93□□□□□ -0.34
BBS4-204ENST00000562084 A0A1B0GUV1 79 aa12.92□□□□□ -0.34
BBS4-204ENST00000562084 H3BQ85 93 aa12.92□□□□□ -0.34
BBS4-204ENST00000562084 OXTP01178 125 aa12.91□□□□□ -0.34
BBS4-204ENST00000562084 JMJD1CQ15652 2540 aa12.91□□□□□ -0.34
BBS4-204ENST00000562084 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
BBS4-204ENST00000562084 HILS1P60008 231 aa12.91□□□□□ -0.34
BBS4-204ENST00000562084 ENHOQ6UWT2 76 aa12.91□□□□□ -0.34
BBS4-204ENST00000562084 ESM1Q9NQ30 184 aa12.91□□□□□ -0.34
BBS4-204ENST00000562084 TRAV23DV6A0A075B6W5 121 aa12.9□□□□□ -0.34
BBS4-204ENST00000562084 LOC110117498A0A087WWA1 95 aa12.9□□□□□ -0.34
BBS4-204ENST00000562084 TRAV7A0A075B6U4 112 aa12.89□□□□□ -0.35
BBS4-204ENST00000562084 DNAJC9-AS1A6NH13 148 aa12.89□□□□□ -0.35
BBS4-204ENST00000562084 Q5XG85 94 aa12.89□□□□□ -0.35
BBS4-204ENST00000562084 MUC7Q8TAX7 377 aa12.89□□□□□ -0.35
BBS4-204ENST00000562084 FAM19A1Q7Z5A9 133 aa12.88□□□□□ -0.35
BBS4-204ENST00000562084 FAM236DA0A1B0GTK5 79 aa12.87□□□□□ -0.35
BBS4-204ENST00000562084 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
BBS4-204ENST00000562084 FAM236CP0DP71 79 aa12.87□□□□□ -0.35
BBS4-204ENST00000562084 PDE6GP18545 87 aa12.87□□□□□ -0.35
BBS4-204ENST00000562084 XCL1P47992 114 aa12.87□□□□□ -0.35
BBS4-204ENST00000562084 IGHV4-28A0A0C4DH34 117 aa12.86□□□□□ -0.35
BBS4-204ENST00000562084 CCL24O00175 119 aa12.86□□□□□ -0.35
BBS4-204ENST00000562084 RBM3P98179 157 aaKnown RBP12.86□□□□□ -0.35
BBS4-204ENST00000562084 Q6ZQT0 140 aa12.86□□□□□ -0.35
BBS4-204ENST00000562084 CSNK1G2-AS1Q8NCQ2 148 aa12.86□□□□□ -0.35
BBS4-204ENST00000562084 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
BBS4-204ENST00000562084 LINC00575Q6W349 94 aa12.85□□□□□ -0.35
BBS4-204ENST00000562084 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
BBS4-204ENST00000562084 SERP1Q9Y6X1 66 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms