RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 AMMECR1LQ6DCA0 310 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 LYPD5Q6UWN5 251 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 SH2D6Q7Z4S9 175 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 C10orf126Q8N4M7 172 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 TMEM101Q96IK0 257 aa4.46□□□□□ -1.7
CAPN3-210ENST00000561817 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 IGHV3OR16-9A0A0B4J2B5 98 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 A0A1B0GV90 55 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 K7EP13 123 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 SPINK8P0C7L1 97 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 FXYD2P54710 66 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 SEC11AP67812 179 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 BATFQ16520 125 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 Q8N1X5 172 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 C11orf45Q8TAV5 145 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 ORAOV1Q8WV07 137 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 LITAFQ99732 161 aa4.45□□□□□ -1.7
CAPN3-210ENST00000561817 PLECQ15149 4684 aaKnown RBP4.44□□□□□ -1.7
CAPN3-210ENST00000561817 IGHV3-64A0A075B6Q5 118 aa4.44□□□□□ -1.7
CAPN3-210ENST00000561817 TAX1BP3O14907 124 aa4.44□□□□□ -1.7
CAPN3-210ENST00000561817 NHLRC4P0CG21 123 aaPredicted RBP4.44□□□□□ -1.7
CAPN3-210ENST00000561817 CD164Q04900 197 aa4.44□□□□□ -1.7
CAPN3-210ENST00000561817 ZFAND6Q6FIF0 208 aa4.44□□□□□ -1.7
CAPN3-210ENST00000561817 CEND1Q8N111 149 aa4.44□□□□□ -1.7
CAPN3-210ENST00000561817 STAB2Q8WWQ8 2551 aa4.44□□□□□ -1.7
CAPN3-210ENST00000561817 A0A087WZ39 114 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 DEFB131BA0A096LNP1 70 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 A0A1B0GWB2 263 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 H3BRM9 83 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 SLPIP03973 132 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 LGALS3P17931 250 aaKnown RBP4.43□□□□□ -1.7
CAPN3-210ENST00000561817 ESRGQ1W209 222 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 Q6ZVH6 145 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-210ENST00000561817 ZNF625Q96I27 306 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-210ENST00000561817 PRR34Q9NV39 138 aa4.43□□□□□ -1.7
CAPN3-210ENST00000561817 TGP01266 2768 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 TRAV10A0A0B4J240 114 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 GAGE12HA6NDE8 117 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 TMEM262E9PQX1 116 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 NDUFA1O15239 70 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 CCL25O15444 150 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 IGHV3-30P01768 117 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 IGHV3-30-5P0DP03 117 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 LINC00269Q8N2A0 174 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 NDUFA12Q9UI09 145 aa4.42□□□□□ -1.7
CAPN3-210ENST00000561817 VPS13DQ5THJ4 4388 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 TIMM17BO60830 172 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 ADAMTSL4-AS1Q5T5F5 129 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 KRTAP26-1Q6PEX3 210 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 ENHOQ6UWT2 76 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 WFDC10BQ8IUB3 73 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 HIST1H4GQ99525 98 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
CAPN3-210ENST00000561817 IGKV3OR2-268A0A0C4DH90 116 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 REG3AQ06141 175 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 FOXI1Q12951 378 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 KIAA0087Q14695 138 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 SCGB1D4Q6XE38 83 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 C5orf38Q86SI9 138 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 WWC2-AS2Q96NR7 200 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 SPANXDQ9BXN6 97 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 SPANXCQ9NY87 97 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.71
CAPN3-210ENST00000561817 CSMD3Q7Z407 3707 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 A6NDN8 102 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 K7ERJ3 54 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 ANGP03950 147 aaKnown RBP4.39□□□□□ -1.71
CAPN3-210ENST00000561817 XCL1P47992 114 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
CAPN3-210ENST00000561817 SS18Q15532 418 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 Q6ZVQ6 151 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 C15orf53Q8NAA6 179 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 CHCHD10Q8WYQ3 142 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-210ENST00000561817 Q9HAA7 133 aa4.39□□□□□ -1.71
CAPN3-210ENST00000561817 DNAH10OSP0CZ25 163 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 SMIM13P0DJ93 91 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 MIAQ16674 131 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 LINC01556Q5JQF7 62 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 MUSTN1Q8IVN3 82 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 NHP2Q9NX24 153 aaKnown RBP4.38□□□□□ -1.71
CAPN3-210ENST00000561817 KLK12Q9UKR0 248 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 LINC00588Q9Y4M8 146 aa4.38□□□□□ -1.71
CAPN3-210ENST00000561817 COX7A2LO14548 114 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 IGHV3-33P01772 117 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 CFC1P0CG37 223 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 Q8IZM0 81 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 MUC7Q8TAX7 377 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 SIGMAR1Q99720 223 aa4.37□□□□□ -1.71
CAPN3-210ENST00000561817 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms