RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 A0A1B0GV90 55 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 SMIM9A6NGZ8 99 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 IGIPA6NJ69 53 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 KNCNA6PVL3 124 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 MT1HL1P0DM35 61 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 GATA1P15976 413 aaPredicted RBP2.16□□□□□ -2.06
SPG11-225ENST00000561391 HINT1P49773 126 aaPredicted RBP2.16□□□□□ -2.06
SPG11-225ENST00000561391 HSD52Q0P140 79 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 DAZ2Q13117 558 aaKnown RBP2.16□□□□□ -2.06
SPG11-225ENST00000561391 ZNF56Q15929 161 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 BATFQ16520 125 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 RRN3P1Q2M238 152 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 C12orf74Q32Q52 190 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 REG3GQ6UW15 175 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 LINC00173Q6ZV60 143 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 KIR2DL5BQ8NHK3 375 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 TIMM21Q9BVV7 248 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 VCX2Q9H322 139 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 CST9LQ9H4G1 147 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 SPANXA1Q9NS26 97 aa2.16□□□□□ -2.06
SPG11-225ENST00000561391 MRPL35Q9NZE8 188 aaKnown RBP2.16□□□□□ -2.06
SPG11-225ENST00000561391 E9PLD3 99 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 H3BRM9 83 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 RS1O15537 224 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 IGHV3-53P01767 116 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 SMIM13P0DJ93 91 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 HTN1P15515 57 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 ZNF25P17030 456 aaPredicted RBP2.15□□□□□ -2.07
SPG11-225ENST00000561391 NMUP48645 174 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 DSCR10P59022 87 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 DEFB1P60022 68 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 COTL1Q14019 142 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 MAJINQ3KP22 176 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 MPV17L2Q567V2 206 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 BVES-AS1Q5T3Y7 98 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 FAM74A4Q5TZK3 123 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 CFAP126Q5VTH2 177 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 Q6ZQT7 251 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 GTF2H5Q6ZYL4 71 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 DAZ4Q86SG3 579 aaKnown RBP2.15□□□□□ -2.07
SPG11-225ENST00000561391 LINC00469Q8N7U9 141 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 C20orf203Q8NBC4 194 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 OR4C5Q8NGB2 326 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 TMEM263Q8WUH6 116 aaKnown RBP2.15□□□□□ -2.07
SPG11-225ENST00000561391 BAALCQ8WXS3 180 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 RPL39LQ96EH5 51 aaKnown RBP2.15□□□□□ -2.07
SPG11-225ENST00000561391 C16orf74Q96GX8 76 aa2.15□□□□□ -2.07
SPG11-225ENST00000561391 DAZ3Q9NR90 486 aaKnown RBP2.15□□□□□ -2.07
SPG11-225ENST00000561391 LPAP08519 4548 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 TRBV7-3A0A075B6L6 115 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 TRAV4A0A0B4J268 109 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 MYMXA0A1B0GTQ4 84 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 TRBV6-4A0A1B0GX49 114 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 C11orf86A6NJI1 115 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 FGF6P10767 208 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 AZU1P20160 251 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 FXYD7P58549 80 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 MRPS36P82909 103 aaKnown RBP2.14□□□□□ -2.07
SPG11-225ENST00000561391 VAMP3Q15836 100 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 HIGD2BQ4VC39 106 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 UFSP1Q6NVU6 142 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 Q6ZVH6 145 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 C11orf72Q8NBR9 251 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 ZNRF2Q8NHG8 242 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 COPS9Q8WXC6 57 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 PLEKHB2Q96CS7 222 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 HIST1H4GQ99525 98 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 GTSF1LQ9H1H1 148 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 XCL2Q9UBD3 114 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 CELA1Q9UNI1 258 aa2.14□□□□□ -2.07
SPG11-225ENST00000561391 CSDC2Q9Y534 153 aaKnown RBP2.14□□□□□ -2.07
SPG11-225ENST00000561391 TRBV25-1A0A075B6N4 114 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 TRGV2A0A075B6R0 118 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 TRGV1A0A0A0MS02 117 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 TRAV8-6A0A0B4J262 113 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 TINCRA0A1B0GVN0 87 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 CCL25O15444 150 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 FABP2P12104 132 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 HTN3P15516 51 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 LGALS3P17931 250 aaKnown RBP2.13□□□□□ -2.07
SPG11-225ENST00000561391 HERVK_113P63121 156 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 CIRBPQ14011 172 aaKnown RBP2.13□□□□□ -2.07
SPG11-225ENST00000561391 TMEM170BQ5T4T1 132 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 LCE3CQ5T5A8 94 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 LYRM7Q5U5X0 104 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 SFTA2Q6UW10 78 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 SCGB1D4Q6XE38 83 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 C2orf91Q6ZV80 131 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 NEGR1Q7Z3B1 354 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 PCP2Q8IVA1 136 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 CEND1Q8N111 149 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 C1orf158Q8N1D5 194 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 Q8NAQ8 132 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 TMEM101Q96IK0 257 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 PRADC1Q9BSG0 188 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 CHAC1Q9BUX1 264 aa2.13□□□□□ -2.07
SPG11-225ENST00000561391 GEMIN7Q9H840 131 aaKnown RBP2.13□□□□□ -2.07
SPG11-225ENST00000561391 IGHV3OR16-12A0A075B7B8 117 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 TRGV4A0A0C4DH28 118 aa2.12□□□□□ -2.07
SPG11-225ENST00000561391 ZNF815PA8K554 130 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms