RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 SMIM2Q9BVW6 85 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 NAT8Q9UHE5 227 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 NAT8BQ9UHF3 227 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 PKIGQ9Y2B9 76 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 A0A087WZ39 114 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 IGHV3OR16-9A0A0B4J2B5 98 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 IFITM10A6NMD0 228 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 S100PP25815 95 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 AKR1D1P51857 326 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 C2orf82Q6UX34 121 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 LINC00518Q8N0U6 118 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 C6orf48Q9UBA6 75 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
GABPB1-211ENST00000561010 TRBV24-1A0A075B6N3 115 aa4.37□□□□□ -1.71
GABPB1-211ENST00000561010 C5orf52A6NGY3 159 aa4.37□□□□□ -1.71
GABPB1-211ENST00000561010 PPP1R2P9O14990 202 aa4.37□□□□□ -1.71
GABPB1-211ENST00000561010 IGLV7-43P04211 117 aa4.37□□□□□ -1.71
GABPB1-211ENST00000561010 OR10D4PQ8NGN7 298 aa4.37□□□□□ -1.71
GABPB1-211ENST00000561010 C20orf78Q9BR46 151 aa4.37□□□□□ -1.71
GABPB1-211ENST00000561010 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 LOC389332A0A1B0GUA5 103 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 A0A1B0GXF2 115 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 GAGE10A6NGK3 116 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 NDUFA1O15239 70 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 PPP1R17O96001 155 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 SNRPEP62304 92 aaKnown RBP4.36□□□□□ -1.71
GABPB1-211ENST00000561010 HBBP68871 147 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 S100A12P80511 92 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 SMAGPQ0VAQ4 97 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 KIAA0087Q14695 138 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 YPEL4Q96NS1 127 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 SPANXA1Q9NS26 97 aa4.36□□□□□ -1.71
GABPB1-211ENST00000561010 MRPL35Q9NZE8 188 aaKnown RBP4.36□□□□□ -1.71
GABPB1-211ENST00000561010 IGLV4-3A0A075B6K6 122 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 H0Y9J4 135 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 M0QXV9 152 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 KRTAP1-4P0C5Y4 121 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 SMIM6P0DI80 62 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 RPL32P62910 135 aaKnown RBP4.35□□□□□ -1.71
GABPB1-211ENST00000561010 MRPS36P82909 103 aaKnown RBP4.35□□□□□ -1.71
GABPB1-211ENST00000561010 C9orf129Q5T035 196 aaKnown RBP4.35□□□□□ -1.71
GABPB1-211ENST00000561010 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 LINC00469Q8N7U9 141 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 PRELID3AQ96N28 172 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 IMMP2LQ96T52 175 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 C12orf57Q99622 126 aa4.35□□□□□ -1.71
GABPB1-211ENST00000561010 TGIF2-C20orf24A0A0A6YYL0 155 aa4.34□□□□□ -1.71
GABPB1-211ENST00000561010 S100A2P29034 98 aa4.34□□□□□ -1.71
GABPB1-211ENST00000561010 FABP9Q0Z7S8 132 aa4.34□□□□□ -1.71
GABPB1-211ENST00000561010 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.71
GABPB1-211ENST00000561010 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
GABPB1-211ENST00000561010 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 A0A1B0GW15 77 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 IFI27P40305 119 aaPredicted RBP4.33□□□□□ -1.72
GABPB1-211ENST00000561010 NDUFA6P56556 154 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 UBE2BP63146 152 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 TMEM136Q6ZRR5 245 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 ORMDL3Q8N138 153 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 TMEM141Q96I45 108 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 TOMM7Q9P0U1 55 aa4.33□□□□□ -1.72
GABPB1-211ENST00000561010 TRGC2P03986 189 aa4.32□□□□□ -1.72
GABPB1-211ENST00000561010 UBE2D1P51668 147 aa4.32□□□□□ -1.72
GABPB1-211ENST00000561010 COX19Q49B96 90 aa4.32□□□□□ -1.72
GABPB1-211ENST00000561010 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
GABPB1-211ENST00000561010 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
GABPB1-211ENST00000561010 NDUFC2-KCTD14E9PQ53 114 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 F8WDY8 70 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BKO60814 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 PPBPP02775 128 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BJP06899 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BOP23527 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BBP33778 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BDP58876 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BCP62807 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 PRR4Q16378 134 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST2H2BEQ16778 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-211ENST00000561010 C2orf66Q6UXQ4 117 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 TEX43Q6ZNM6 134 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BHQ93079 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BNQ99877 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 HIST1H2BMQ99879 126 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 PYGO1Q9Y3Y4 419 aa4.31□□□□□ -1.72
GABPB1-211ENST00000561010 TRBV30A0A0K0K1B3 111 aa4.3□□□□□ -1.72
GABPB1-211ENST00000561010 PCP4L1A6NKN8 68 aa4.3□□□□□ -1.72
GABPB1-211ENST00000561010 TSPAN13O95857 204 aa4.3□□□□□ -1.72
GABPB1-211ENST00000561010 Q8N8P6 123 aa4.3□□□□□ -1.72
GABPB1-211ENST00000561010 PACRGQ96M98 296 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-211ENST00000561010 MAP1LC3AQ9H492 121 aa4.3□□□□□ -1.72
GABPB1-211ENST00000561010 CYSLTR1Q9Y271 337 aa4.3□□□□□ -1.72
GABPB1-211ENST00000561010 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
GABPB1-211ENST00000561010 PRSS2P07478 247 aa4.29□□□□□ -1.72
GABPB1-211ENST00000561010 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
GABPB1-211ENST00000561010 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
GABPB1-211ENST00000561010 ATP5L2Q7Z4Y8 100 aa4.29□□□□□ -1.72
GABPB1-211ENST00000561010 AMELXQ99217 191 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms