RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 C1orf43Q9BWL3 253 aa3.61□□□□□ -1.83
ZEB1-220ENST00000560909 TM2D2Q9BX73 214 aa3.61□□□□□ -1.83
ZEB1-220ENST00000560909 CHTOPQ9Y3Y2 248 aaKnown RBP3.61□□□□□ -1.83
ZEB1-220ENST00000560909 DNAH5Q8TE73 4624 aa3.61□□□□□ -1.83
ZEB1-220ENST00000560909 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
ZEB1-220ENST00000560909 PKD1P98161 4303 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 LOC105371267A0A1B0GV96 52 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 RTL8CO15255 209 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 DPM2O94777 84 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 KRTDAPP60985 99 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 KIAA0087Q14695 138 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 C1orf134Q5TEV5 83 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 CLPSL2Q6UWE3 100 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 CDKN2A-AS1Q9UH64 79 aa3.6□□□□□ -1.83
ZEB1-220ENST00000560909 DNAH8Q96JB1 4490 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 IGLV10-54A0A075B6I4 117 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 IGHV3-64A0A075B6Q5 118 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 IGKV2D-24A0A075B6R9 120 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 GVQW2A0A096LPI5 108 aaPredicted RBP3.59□□□□□ -1.83
ZEB1-220ENST00000560909 TMEM223A0PJW6 202 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 SMIM1B2RUZ4 78 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 F8WDY8 70 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 M0R2N4 97 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 COX7A2LO14548 114 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 IGKCP01834 107 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 XCL1P47992 114 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 PTTG1IPP53801 180 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 PYY3Q5JQD4 70 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 CHAC1Q9BUX1 264 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 GEMIN7Q9H840 131 aaKnown RBP3.59□□□□□ -1.83
ZEB1-220ENST00000560909 Q9HAA7 133 aa3.59□□□□□ -1.83
ZEB1-220ENST00000560909 LRP1BQ9NZR2 4599 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 IGHV1-58A0A0C4DH39 117 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 C20orf202A1L168 122 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 H3BRM9 83 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 WFDC2Q14508 124 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 CFAP161Q6P656 301 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 C5orf38Q86SI9 138 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 LINC00469Q8N7U9 141 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 PMCHL2Q9BQD1 86 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 PKHD1P08F94 4074 aa3.58□□□□□ -1.84
ZEB1-220ENST00000560909 A0A087WTM6 91 aa3.57□□□□□ -1.84
ZEB1-220ENST00000560909 USP17L23D6RBM5 183 aa3.57□□□□□ -1.84
ZEB1-220ENST00000560909 E9PLD3 99 aa3.57□□□□□ -1.84
ZEB1-220ENST00000560909 LINC00336Q6ZUF6 198 aa3.57□□□□□ -1.84
ZEB1-220ENST00000560909 Q8IZM0 81 aa3.57□□□□□ -1.84
ZEB1-220ENST00000560909 C2orf48Q96LS8 159 aa3.57□□□□□ -1.84
ZEB1-220ENST00000560909 H0Y8G0 127 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 LEPROTO15243 131 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 APOMO95445 188 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 SCGB1D1O95968 90 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 CNBPP62633 177 aaKnown RBP3.56□□□□□ -1.84
ZEB1-220ENST00000560909 C14orf177Q52M58 125 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 TMEM170BQ5T4T1 132 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 STPG4Q8N801 248 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 PLEKHB2Q96CS7 222 aa3.56□□□□□ -1.84
ZEB1-220ENST00000560909 ZNF625Q96I27 306 aaPredicted RBP3.56□□□□□ -1.84
ZEB1-220ENST00000560909 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 A0A1B0GVY2 172 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 SPINK8P0C7L1 97 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 SMIM6P0DI80 62 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 MALP21145 153 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 CXCL5P42830 114 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 SFTA2Q6UW10 78 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 Q8N814 137 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 COX7B2Q8TF08 81 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 ORAOV1Q8WV07 137 aa3.55□□□□□ -1.84
ZEB1-220ENST00000560909 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 hDV102S1A0JD36 115 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 J3QQQ9 107 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 NDUFA1O15239 70 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 DLEU1O43261 78 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 PSCAO43653 123 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 NMUP48645 174 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 HERVK_113P61574 105 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 SPAG11BQ08648 103 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 MAJINQ3KP22 176 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 FAM30AQ9NZY2 134 aa3.54□□□□□ -1.84
ZEB1-220ENST00000560909 TRBV30A0A0K0K1B3 111 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 TLX1NBP0CAT3 122 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 HERV-K104P63124 156 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 SYCNQ0VAF6 134 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 HIGD2BQ4VC39 106 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 C6orf226Q5I0X4 101 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 C10orf25Q5T742 122 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 UNQ6190/PRO20217Q6UXQ8 127 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 C9orf163Q8N9P6 203 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 NDUFA12Q9UI09 145 aa3.53□□□□□ -1.84
ZEB1-220ENST00000560909 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.85
ZEB1-220ENST00000560909 MYMXA0A1B0GTQ4 84 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 HSBP1L1C9JCN9 74 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 LECT2O14960 151 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 TIMM17BO60830 172 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 PRSS2P07478 247 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 COX8AP10176 69 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 COX17Q14061 63 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms