RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TOMM7Q9P0U1 55 aa7.6□□□□□ -1.19
USP8-212ENST00000560730 LINC00474Q9P2X8 69 aa7.6□□□□□ -1.19
USP8-212ENST00000560730 PKIGQ9Y2B9 76 aa7.6□□□□□ -1.19
USP8-212ENST00000560730 IGLV5-45A0A087WSX0 123 aa7.59□□□□□ -1.19
USP8-212ENST00000560730 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
USP8-212ENST00000560730 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
USP8-212ENST00000560730 NDUFA6P56556 154 aa7.59□□□□□ -1.19
USP8-212ENST00000560730 SMIM1B2RUZ4 78 aa7.58□□□□□ -1.2
USP8-212ENST00000560730 HNRNPA3P51991 378 aaKnown RBP7.58□□□□□ -1.2
USP8-212ENST00000560730 C9orf116Q5BN46 136 aaPredicted RBP7.58□□□□□ -1.2
USP8-212ENST00000560730 Q6ZRP5 223 aa7.58□□□□□ -1.2
USP8-212ENST00000560730 CHCHD1Q96BP2 118 aaKnown RBP7.58□□□□□ -1.2
USP8-212ENST00000560730 PRSS2P07478 247 aa7.57□□□□□ -1.2
USP8-212ENST00000560730 C6orf226Q5I0X4 101 aa7.57□□□□□ -1.2
USP8-212ENST00000560730 Q8IZM0 81 aa7.57□□□□□ -1.2
USP8-212ENST00000560730 PACRGQ96M98 296 aaPredicted RBP7.57□□□□□ -1.2
USP8-212ENST00000560730 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 ATP5LO75964 103 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 SPINK8P0C7L1 97 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 TLX1NBP0CAT3 122 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 IGLC3P0DOY3 106 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 LINC00310P59036 64 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 FAM19A2Q8N3H0 131 aa7.56□□□□□ -1.2
USP8-212ENST00000560730 CKS1BP61024 79 aa7.55□□□□□ -1.2
USP8-212ENST00000560730 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
USP8-212ENST00000560730 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
USP8-212ENST00000560730 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
USP8-212ENST00000560730 NUPR1O60356 82 aa7.54□□□□□ -1.2
USP8-212ENST00000560730 SERF1AO75920 110 aa7.54□□□□□ -1.2
USP8-212ENST00000560730 ZNF22P17026 224 aaPredicted RBP7.54□□□□□ -1.2
USP8-212ENST00000560730 COX7B2Q8TF08 81 aa7.54□□□□□ -1.2
USP8-212ENST00000560730 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
USP8-212ENST00000560730 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
USP8-212ENST00000560730 HSBP1O75506 76 aa7.53□□□□□ -1.2
USP8-212ENST00000560730 IFI27L1Q96BM0 104 aa7.53□□□□□ -1.2
USP8-212ENST00000560730 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
USP8-212ENST00000560730 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.2
USP8-212ENST00000560730 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.2
USP8-212ENST00000560730 F8VRH5 84 aa7.52□□□□□ -1.21
USP8-212ENST00000560730 H3BRM9 83 aa7.52□□□□□ -1.21
USP8-212ENST00000560730 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
USP8-212ENST00000560730 PHF5AQ7RTV0 110 aaKnown RBP7.52□□□□□ -1.21
USP8-212ENST00000560730 IGLV5-39A0A0G2JS06 123 aa7.51□□□□□ -1.21
USP8-212ENST00000560730 PRR3P79522 188 aaKnown RBP7.51□□□□□ -1.21
USP8-212ENST00000560730 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
USP8-212ENST00000560730 MYCBP2O75592 4640 aa7.5□□□□□ -1.21
USP8-212ENST00000560730 TRAV12-1A0A0B4J245 112 aa7.5□□□□□ -1.21
USP8-212ENST00000560730 CXCL5P42830 114 aa7.5□□□□□ -1.21
USP8-212ENST00000560730 TMEM170BQ5T4T1 132 aa7.5□□□□□ -1.21
USP8-212ENST00000560730 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
USP8-212ENST00000560730 KRTAP11-1Q8IUC1 163 aa7.49□□□□□ -1.21
USP8-212ENST00000560730 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
USP8-212ENST00000560730 KRTAP29-1A8MX34 341 aaPredicted RBP7.48□□□□□ -1.21
USP8-212ENST00000560730 XAGE1AQ9HD64 81 aa7.48□□□□□ -1.21
USP8-212ENST00000560730 H0Y8G0 127 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 LEPROTL1O95214 131 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 FABP4P15090 132 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
USP8-212ENST00000560730 ODF1Q14990 250 aa7.46□□□□□ -1.21
USP8-212ENST00000560730 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.21
USP8-212ENST00000560730 PSORS1C2Q9UIG4 136 aa7.46□□□□□ -1.21
USP8-212ENST00000560730 TMEM223A0PJW6 202 aa7.45□□□□□ -1.22
USP8-212ENST00000560730 M0QXV9 152 aa7.45□□□□□ -1.22
USP8-212ENST00000560730 OXTP01178 125 aa7.44□□□□□ -1.22
USP8-212ENST00000560730 ZNF625Q96I27 306 aaPredicted RBP7.44□□□□□ -1.22
USP8-212ENST00000560730 PFN2P35080 140 aa7.44□□□□□ -1.22
USP8-212ENST00000560730 SRSF9Q13242 221 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP8-212ENST00000560730 HSPB8Q9UJY1 196 aa7.44□□□□□ -1.22
USP8-212ENST00000560730 PMCHL2Q9BQD1 86 aa7.43□□□□□ -1.22
USP8-212ENST00000560730 C22orf24Q9Y442 160 aa7.43□□□□□ -1.22
USP8-212ENST00000560730 LRP1Q07954 4544 aaKnown RBP7.42□□□□□ -1.22
USP8-212ENST00000560730 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
USP8-212ENST00000560730 C1orf137Q5JT78 98 aa7.42□□□□□ -1.22
USP8-212ENST00000560730 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
USP8-212ENST00000560730 UBE2BP63146 152 aa7.4□□□□□ -1.22
USP8-212ENST00000560730 SPINK6Q6UWN8 80 aa7.4□□□□□ -1.22
USP8-212ENST00000560730 ATP6V1G1O75348 118 aa7.39□□□□□ -1.23
USP8-212ENST00000560730 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
USP8-212ENST00000560730 SND1-IT1Q9HBX3 110 aa7.39□□□□□ -1.23
USP8-212ENST00000560730 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
USP8-212ENST00000560730 DPM2O94777 84 aa7.38□□□□□ -1.23
USP8-212ENST00000560730 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
USP8-212ENST00000560730 S100A1P23297 94 aa7.38□□□□□ -1.23
USP8-212ENST00000560730 PLNP26678 52 aa7.38□□□□□ -1.23
USP8-212ENST00000560730 TSPEAR-AS2P59090 65 aa7.38□□□□□ -1.23
USP8-212ENST00000560730 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
USP8-212ENST00000560730 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
USP8-212ENST00000560730 A0A0U1RRA0 63 aa7.37□□□□□ -1.23
USP8-212ENST00000560730 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms