RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 Q6ZRP5 223 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 CBLN2Q8IUK8 224 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 Q8IZM0 81 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 SLC7A5P1Q8MH63 180 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 CST9LQ9H4G1 147 aa8.12□□□□□ -1.11
CTDSPL2-209ENST00000560620 OXTP01178 125 aa8.11□□□□□ -1.11
CTDSPL2-209ENST00000560620 HBDP02042 147 aa8.11□□□□□ -1.11
CTDSPL2-209ENST00000560620 PRR3P79522 188 aaKnown RBP8.11□□□□□ -1.11
CTDSPL2-209ENST00000560620 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
CTDSPL2-209ENST00000560620 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
CTDSPL2-209ENST00000560620 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
CTDSPL2-209ENST00000560620 URB1-AS1Q96HZ7 61 aa8.1□□□□□ -1.11
CTDSPL2-209ENST00000560620 HERC1Q15751 4861 aa8.1□□□□□ -1.11
CTDSPL2-209ENST00000560620 SPINK8P0C7L1 97 aa8.09□□□□□ -1.11
CTDSPL2-209ENST00000560620 PHF5AQ7RTV0 110 aaKnown RBP8.09□□□□□ -1.11
CTDSPL2-209ENST00000560620 A0A096LNJ9 63 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 FAM168BA1KXE4 195 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 SMIM1B2RUZ4 78 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 F8VRH5 84 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 H3BRM9 83 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 ATP5LO75964 103 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 PDZD11Q5EBL8 140 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 COX7B2Q8TF08 81 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 YPEL4Q96NS1 127 aa8.08□□□□□ -1.12
CTDSPL2-209ENST00000560620 CXCL5P42830 114 aa8.07□□□□□ -1.12
CTDSPL2-209ENST00000560620 IGLV5-45A0A087WSX0 123 aa8.06□□□□□ -1.12
CTDSPL2-209ENST00000560620 BAGE3Q86Y29 109 aa8.06□□□□□ -1.12
CTDSPL2-209ENST00000560620 UBE2BP63146 152 aa8.05□□□□□ -1.12
CTDSPL2-209ENST00000560620 CHCHD1Q96BP2 118 aaKnown RBP8.05□□□□□ -1.12
CTDSPL2-209ENST00000560620 M0QXV9 152 aa8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 HSBP1O75506 76 aa8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 TRGC2P03986 189 aa8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 C9orf129Q5T035 196 aaKnown RBP8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
CTDSPL2-209ENST00000560620 TMEM170BQ5T4T1 132 aa8.03□□□□□ -1.12
CTDSPL2-209ENST00000560620 SPINK6Q6UWN8 80 aa8.03□□□□□ -1.12
CTDSPL2-209ENST00000560620 ZNF22P17026 224 aaPredicted RBP8.02□□□□□ -1.13
CTDSPL2-209ENST00000560620 CHTOPQ9Y3Y2 248 aaKnown RBP8.02□□□□□ -1.13
CTDSPL2-209ENST00000560620 REG3GQ6UW15 175 aa8.01□□□□□ -1.13
CTDSPL2-209ENST00000560620 FAM19A2Q8N3H0 131 aa8.01□□□□□ -1.13
CTDSPL2-209ENST00000560620 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
CTDSPL2-209ENST00000560620 C11orf86A6NJI1 115 aa8□□□□□ -1.13
CTDSPL2-209ENST00000560620 H0Y8G0 127 aa8□□□□□ -1.13
CTDSPL2-209ENST00000560620 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
CTDSPL2-209ENST00000560620 PFN2P35080 140 aa7.99□□□□□ -1.13
CTDSPL2-209ENST00000560620 SERTAD4-AS1Q5TG53 156 aa7.99□□□□□ -1.13
CTDSPL2-209ENST00000560620 KRTAP7-1Q8IUC3 87 aa7.99□□□□□ -1.13
CTDSPL2-209ENST00000560620 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
CTDSPL2-209ENST00000560620 C22orf24Q9Y442 160 aa7.98□□□□□ -1.13
CTDSPL2-209ENST00000560620 IGLV5-39A0A0G2JS06 123 aa7.97□□□□□ -1.13
CTDSPL2-209ENST00000560620 SERF1AO75920 110 aa7.97□□□□□ -1.13
CTDSPL2-209ENST00000560620 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.13
CTDSPL2-209ENST00000560620 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-209ENST00000560620 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
CTDSPL2-209ENST00000560620 ZNF625Q96I27 306 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-209ENST00000560620 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
CTDSPL2-209ENST00000560620 COLCA2A8K830 154 aa7.96□□□□□ -1.14
CTDSPL2-209ENST00000560620 LEPROTL1O95214 131 aa7.96□□□□□ -1.14
CTDSPL2-209ENST00000560620 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
CTDSPL2-209ENST00000560620 FABP4P15090 132 aa7.95□□□□□ -1.14
CTDSPL2-209ENST00000560620 MRPL55Q7Z7F7 128 aaKnown RBP7.95□□□□□ -1.14
CTDSPL2-209ENST00000560620 LINC01600Q96MT4 127 aa7.95□□□□□ -1.14
CTDSPL2-209ENST00000560620 ERG28Q9UKR5 140 aa7.95□□□□□ -1.14
CTDSPL2-209ENST00000560620 SCO1O75880 301 aa7.94□□□□□ -1.14
CTDSPL2-209ENST00000560620 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
CTDSPL2-209ENST00000560620 SFTA2Q6UW10 78 aa7.94□□□□□ -1.14
CTDSPL2-209ENST00000560620 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
CTDSPL2-209ENST00000560620 DIRC1Q969H9 104 aa7.94□□□□□ -1.14
CTDSPL2-209ENST00000560620 GAGE10A6NGK3 116 aa7.93□□□□□ -1.14
CTDSPL2-209ENST00000560620 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
CTDSPL2-209ENST00000560620 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
CTDSPL2-209ENST00000560620 RPL37AP8A6NKH3 93 aa7.92□□□□□ -1.14
CTDSPL2-209ENST00000560620 LINC00158P58513 81 aa7.92□□□□□ -1.14
CTDSPL2-209ENST00000560620 COX17Q14061 63 aa7.92□□□□□ -1.14
CTDSPL2-209ENST00000560620 TP73-AS1Q9UF72 201 aa7.92□□□□□ -1.14
CTDSPL2-209ENST00000560620 NUPR1O60356 82 aa7.91□□□□□ -1.14
CTDSPL2-209ENST00000560620 ATP6V1G1O75348 118 aa7.91□□□□□ -1.14
CTDSPL2-209ENST00000560620 LINC00310P59036 64 aa7.91□□□□□ -1.14
CTDSPL2-209ENST00000560620 A0A0U1RRA0 63 aa7.9□□□□□ -1.14
CTDSPL2-209ENST00000560620 H0Y9J4 135 aa7.9□□□□□ -1.14
CTDSPL2-209ENST00000560620 ODF1Q14990 250 aa7.9□□□□□ -1.14
CTDSPL2-209ENST00000560620 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
CTDSPL2-209ENST00000560620 SND1-IT1Q9HBX3 110 aa7.9□□□□□ -1.14
CTDSPL2-209ENST00000560620 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
CTDSPL2-209ENST00000560620 PLNP26678 52 aa7.89□□□□□ -1.15
CTDSPL2-209ENST00000560620 MEIG1Q5JSS6 88 aa7.89□□□□□ -1.15
CTDSPL2-209ENST00000560620 RPL24P83731 157 aaKnown RBP7.88□□□□□ -1.15
CTDSPL2-209ENST00000560620 PMCHL2Q9BQD1 86 aa7.88□□□□□ -1.15
CTDSPL2-209ENST00000560620 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
CTDSPL2-209ENST00000560620 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
CTDSPL2-209ENST00000560620 DPM2O94777 84 aa7.87□□□□□ -1.15
CTDSPL2-209ENST00000560620 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
CTDSPL2-209ENST00000560620 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 MYMXA0A1B0GTQ4 84 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 ZNF861PO60384 105 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms