RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	LOC389332	A0A1B0GUA5	103 aa		4.11	□□□□□ -1.75
IRF9-208	ENST00000560311	RAB5A	P20339	215 aa		4.11	□□□□□ -1.75
IRF9-208	ENST00000560311	SYCN	Q0VAF6	134 aa		4.11	□□□□□ -1.75
IRF9-208	ENST00000560311	C5orf38	Q86SI9	138 aa		4.11	□□□□□ -1.75
IRF9-208	ENST00000560311	IMMP2L	Q96T52	175 aa		4.11	□□□□□ -1.75
IRF9-208	ENST00000560311	OPRPN	Q99935	248 aa	Predicted RBP	4.11	□□□□□ -1.75
IRF9-208	ENST00000560311	TRAV9-1	A0A075B6T8	112 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	APOM	O95445	188 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	COX19	Q49B96	90 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311		Q6ZRU5	148 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	STPG4	Q8N801	248 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311		Q8N8P6	123 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	OR10D4P	Q8NGN7	298 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	C7orf33	Q8WU49	177 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	ORAOV1	Q8WV07	137 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	DPH3	Q96FX2	82 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	CAMK2N2	Q96S95	79 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	SEC11C	Q9BY50	192 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	CTDSP1	Q9GZU7	261 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	CYSLTR1	Q9Y271	337 aa		4.1	□□□□□ -1.75
IRF9-208	ENST00000560311	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	LOC107984640	A0A0U1RRK4	108 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	SMIM6	P0DI80	62 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	PRR3	P79522	188 aa	Known RBP	4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	RPL18A	Q02543	176 aa	Known RBP	4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	ORMDL2	Q53FV1	153 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	C2orf66	Q6UXQ4	117 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311		Q6ZN92	141 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	TEX43	Q6ZNM6	134 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	TMEM141	Q96I45	108 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	C2orf48	Q96LS8	159 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	LINC00474	Q9P2X8	69 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	PYGO1	Q9Y3Y4	419 aa		4.09	□□□□□ -1.75
IRF9-208	ENST00000560311	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.09	□□□□□ -1.76
IRF9-208	ENST00000560311	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.08	□□□□□ -1.76
IRF9-208	ENST00000560311		K7EMI3	77 aa		4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	UBE2D1	P51668	147 aa		4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	GAGE2B	Q13066	116 aa		4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	RHEB	Q15382	184 aa		4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	KIAA1644	Q3SXP7	199 aa		4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	LINC00173	Q6ZV60	143 aa		4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	NXT2	Q9NPJ8	142 aa	Known RBP	4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.08	□□□□□ -1.76
IRF9-208	ENST00000560311	UBR4	Q5T4S7	5183 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311		A0A087WZ39	114 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311		A0A0J9YXV3	536 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311		M0QXV9	152 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311	NDUFA1	O15239	70 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311	OXT	P01178	125 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311	NPS	P0C0P6	89 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311	C10orf91	Q5T1B1	145 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311	LINC00242	Q5T6M2	205 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311	ZC2HC1B	Q5TFG8	222 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311	AMELX	Q99217	191 aa		4.07	□□□□□ -1.76
IRF9-208	ENST00000560311		A0A1B0GV72	72 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	IGIP	A6NJ69	53 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	MT-ND6	P03923	174 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	C6orf226	Q5I0X4	101 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	C10orf25	Q5T742	122 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	TOMM6	Q96B49	74 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	TIMM17A	Q99595	171 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	MAP1LC3C	Q9BXW4	147 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	GNB1L	Q9BYB4	327 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	RPS10P5	Q9NQ39	176 aa		4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	MRPL35	Q9NZE8	188 aa	Known RBP	4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	FLG2	Q5D862	2391 aa	Predicted RBP	4.06	□□□□□ -1.76
IRF9-208	ENST00000560311	SCGB1A1	P11684	91 aa		4.05	□□□□□ -1.76
IRF9-208	ENST00000560311	PAPPA-AS1	Q5QFB9	102 aa		4.05	□□□□□ -1.76
IRF9-208	ENST00000560311	C6orf48	Q9UBA6	75 aa		4.05	□□□□□ -1.76
IRF9-208	ENST00000560311		A0A1W2PNN7	141 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	LINC01546	A6NGU7	62 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	DLEU1	O43261	78 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	HERVK_113	P63121	156 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	FABP9	Q0Z7S8	132 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	KIAA0087	Q14695	138 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	C9orf116	Q5BN46	136 aa	Predicted RBP	4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	C2orf82	Q6UX34	121 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311		Q6ZRP5	223 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	FA2H	Q7L5A8	372 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	FAM19A3	Q7Z5A8	133 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	LINC01561	Q8N1V8	128 aa		4.04	□□□□□ -1.76
IRF9-208	ENST00000560311	TRBV30	A0A0K0K1B3	111 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	FAM168B	A1KXE4	195 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	APOC3	P02656	99 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	PRSS2	P07478	247 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	TLX1NB	P0CAT3	122 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	SVBP	Q8N300	66 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	C14orf144	Q96I85	54 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	SCGB3A1	Q96QR1	104 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	KRTAP2-2	Q9BYT5	123 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	SMCO4	Q9NRQ5	59 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	TOMM7	Q9P0U1	55 aa		4.03	□□□□□ -1.76
IRF9-208	ENST00000560311	LINC01549	A6NIU2	74 aa		4.02	□□□□□ -1.77
IRF9-208	ENST00000560311	NDUFC2-KCTD14	E9PQ53	114 aa		4.02	□□□□□ -1.77
IRF9-208	ENST00000560311	MT1HL1	P0DM35	61 aa		4.02	□□□□□ -1.77
IRF9-208	ENST00000560311	SEC11A	P67812	179 aa		4.02	□□□□□ -1.77
IRF9-208	ENST00000560311	GAGE2E	Q4V326	116 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms