RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 C15orf56Q8N910 161 aa8.88□□□□□ -0.99
CHRNB4-204ENST00000559849 FAM104AQ969W3 186 aa8.88□□□□□ -0.99
CHRNB4-204ENST00000559849 CYSLTR1Q9Y271 337 aa8.88□□□□□ -0.99
CHRNB4-204ENST00000559849 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
CHRNB4-204ENST00000559849 OPRPNQ99935 248 aaPredicted RBP8.87□□□□□ -0.99
CHRNB4-204ENST00000559849 FAM30AQ9NZY2 134 aa8.87□□□□□ -0.99
CHRNB4-204ENST00000559849 TP73-AS1Q9UF72 201 aa8.87□□□□□ -0.99
CHRNB4-204ENST00000559849 H3BUT2 72 aa8.87□□□□□ -0.99
CHRNB4-204ENST00000559849 CNBPP62633 177 aaKnown RBP8.87□□□□□ -0.99
CHRNB4-204ENST00000559849 C2orf66Q6UXQ4 117 aa8.87□□□□□ -0.99
CHRNB4-204ENST00000559849 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.86□□□□□ -0.99
CHRNB4-204ENST00000559849 RPL24P83731 157 aaKnown RBP8.86□□□□□ -0.99
CHRNB4-204ENST00000559849 Q6ZSA8 131 aa8.86□□□□□ -0.99
CHRNB4-204ENST00000559849 SPCS1Q9Y6A9 102 aa8.86□□□□□ -0.99
CHRNB4-204ENST00000559849 A0A1W2PPM0 123 aa8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 Q8N1X5 172 aa8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 GEMIN7Q9H840 131 aaKnown RBP8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 IGHV1-58A0A0C4DH39 117 aa8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 TSPAN13O95857 204 aa8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
CHRNB4-204ENST00000559849 DNAH8Q96JB1 4490 aa8.84□□□□□ -0.99
CHRNB4-204ENST00000559849 IGLV4-3A0A075B6K6 122 aa8.84□□□□□ -0.99
CHRNB4-204ENST00000559849 SLPIP03973 132 aa8.84□□□□□ -0.99
CHRNB4-204ENST00000559849 FABP2P12104 132 aa8.84□□□□□ -0.99
CHRNB4-204ENST00000559849 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
CHRNB4-204ENST00000559849 COX7A2LO14548 114 aa8.84□□□□□ -0.99
CHRNB4-204ENST00000559849 MALP21145 153 aa8.84□□□□□ -0.99
CHRNB4-204ENST00000559849 H0Y8G0 127 aa8.83□□□□□ -1
CHRNB4-204ENST00000559849 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
CHRNB4-204ENST00000559849 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
CHRNB4-204ENST00000559849 IGIPA6NJ69 53 aa8.82□□□□□ -1
CHRNB4-204ENST00000559849 LINC01549A6NIU2 74 aa8.82□□□□□ -1
CHRNB4-204ENST00000559849 HAMPP81172 84 aa8.82□□□□□ -1
CHRNB4-204ENST00000559849 SDIM1Q6ZPB5 146 aa8.82□□□□□ -1
CHRNB4-204ENST00000559849 TOMM6Q96B49 74 aa8.82□□□□□ -1
CHRNB4-204ENST00000559849 VCX2Q9H322 139 aa8.82□□□□□ -1
CHRNB4-204ENST00000559849 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 PAPPA-AS1Q5QFB9 102 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 C5orf38Q86SI9 138 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 CHAC1Q9BUX1 264 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 IGHV3-64A0A075B6Q5 118 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 IGHV3OR16-9A0A0B4J2B5 98 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 APOMO95445 188 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 TIMM17AQ99595 171 aa8.81□□□□□ -1
CHRNB4-204ENST00000559849 F8W1H4 67 aa8.8□□□□□ -1
CHRNB4-204ENST00000559849 ATP5LO75964 103 aa8.8□□□□□ -1
CHRNB4-204ENST00000559849 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
CHRNB4-204ENST00000559849 AMELXQ99217 191 aa8.8□□□□□ -1
CHRNB4-204ENST00000559849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
CHRNB4-204ENST00000559849 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
CHRNB4-204ENST00000559849 LINC00242Q5T6M2 205 aa8.79□□□□□ -1
CHRNB4-204ENST00000559849 SCXQ7RTU7 201 aa8.79□□□□□ -1
CHRNB4-204ENST00000559849 LINC00526Q96FQ7 95 aa8.79□□□□□ -1
CHRNB4-204ENST00000559849 SCGB3A1Q96QR1 104 aa8.79□□□□□ -1
CHRNB4-204ENST00000559849 EPM2AB3EWF7 344 aa8.78□□□□□ -1
CHRNB4-204ENST00000559849 UBE2D1P51668 147 aa8.78□□□□□ -1
CHRNB4-204ENST00000559849 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
CHRNB4-204ENST00000559849 FAT1Q14517 4588 aa8.78□□□□□ -1
CHRNB4-204ENST00000559849 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
CHRNB4-204ENST00000559849 CIRBP-AS1Q8TBR5 109 aa8.77□□□□□ -1
CHRNB4-204ENST00000559849 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
CHRNB4-204ENST00000559849 ZC2HC1BQ5TFG8 222 aa8.77□□□□□ -1.01
CHRNB4-204ENST00000559849 IGLV4-69A0A075B6H9 119 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 SMIM13P0DJ93 91 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 COX6A2Q02221 97 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 SYCNQ0VAF6 134 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 HIGD1BQ9P298 99 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 ABCA13Q86UQ4 5058 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 A0A087WZ39 114 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 RAB37Q96AX2 223 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
CHRNB4-204ENST00000559849 Q5VSD8 79 aa8.75□□□□□ -1.01
CHRNB4-204ENST00000559849 C2orf48Q96LS8 159 aa8.75□□□□□ -1.01
CHRNB4-204ENST00000559849 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
CHRNB4-204ENST00000559849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.75□□□□□ -1.01
CHRNB4-204ENST00000559849 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
CHRNB4-204ENST00000559849 DPH3Q96FX2 82 aa8.74□□□□□ -1.01
CHRNB4-204ENST00000559849 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
CHRNB4-204ENST00000559849 PANO1I0J062 215 aa8.74□□□□□ -1.01
CHRNB4-204ENST00000559849 SPAG11BQ08648 103 aa8.74□□□□□ -1.01
CHRNB4-204ENST00000559849 ODF1Q14990 250 aa8.74□□□□□ -1.01
CHRNB4-204ENST00000559849 PKIGQ9Y2B9 76 aa8.74□□□□□ -1.01
CHRNB4-204ENST00000559849 HERVK_113P63121 156 aa8.73□□□□□ -1.01
CHRNB4-204ENST00000559849 LINC01561Q8N1V8 128 aa8.73□□□□□ -1.01
CHRNB4-204ENST00000559849 F8WDY8 70 aa8.73□□□□□ -1.01
CHRNB4-204ENST00000559849 Q6ZRU5 148 aa8.73□□□□□ -1.01
CHRNB4-204ENST00000559849 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
CHRNB4-204ENST00000559849 TRAV12-1A0A0B4J245 112 aa8.71□□□□□ -1.01
CHRNB4-204ENST00000559849 CHTF8P0CG12 524 aa8.71□□□□□ -1.01
CHRNB4-204ENST00000559849 PMVKQ15126 192 aa8.71□□□□□ -1.01
CHRNB4-204ENST00000559849 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.01
CHRNB4-204ENST00000559849 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.02
CHRNB4-204ENST00000559849 MRPL35Q9NZE8 188 aaKnown RBP8.71□□□□□ -1.02
CHRNB4-204ENST00000559849 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms