RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LINC00518Q8N0U6 118 aa6.84□□□□□ -1.31
TPM1-221ENST00000559831 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
TPM1-221ENST00000559831 C14orf144Q96I85 54 aa6.84□□□□□ -1.31
TPM1-221ENST00000559831 DNAH10Q8IVF4 4471 aa6.84□□□□□ -1.31
TPM1-221ENST00000559831 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
TPM1-221ENST00000559831 NDUFA1O15239 70 aa6.83□□□□□ -1.32
TPM1-221ENST00000559831 CXCL5P42830 114 aa6.83□□□□□ -1.32
TPM1-221ENST00000559831 UNQ6190/PRO20217Q6UXQ8 127 aa6.83□□□□□ -1.32
TPM1-221ENST00000559831 Q8N814 137 aa6.83□□□□□ -1.32
TPM1-221ENST00000559831 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
TPM1-221ENST00000559831 C2orf48Q96LS8 159 aa6.83□□□□□ -1.32
TPM1-221ENST00000559831 HYDINQ4G0P3 5121 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 COX8AP10176 69 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 SYCNQ0VAF6 134 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 C10orf25Q5T742 122 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 Q6ZRU5 148 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 PRO1933Q9H354 126 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 TP73-AS1Q9UF72 201 aa6.82□□□□□ -1.32
TPM1-221ENST00000559831 SLPIP03973 132 aa6.81□□□□□ -1.32
TPM1-221ENST00000559831 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
TPM1-221ENST00000559831 SCGB1D4Q6XE38 83 aa6.81□□□□□ -1.32
TPM1-221ENST00000559831 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
TPM1-221ENST00000559831 F8WDY8 70 aa6.8□□□□□ -1.32
TPM1-221ENST00000559831 HERV-K104P63124 156 aa6.8□□□□□ -1.32
TPM1-221ENST00000559831 C9orf116Q5BN46 136 aaPredicted RBP6.8□□□□□ -1.32
TPM1-221ENST00000559831 SLC25A34Q6PIV7 304 aa6.8□□□□□ -1.32
TPM1-221ENST00000559831 SFTA2Q6UW10 78 aa6.8□□□□□ -1.32
TPM1-221ENST00000559831 BOD1L2Q8IYS8 172 aa6.8□□□□□ -1.32
TPM1-221ENST00000559831 C6orf48Q9UBA6 75 aa6.8□□□□□ -1.32
TPM1-221ENST00000559831 RYR3Q15413 4870 aa6.79□□□□□ -1.32
TPM1-221ENST00000559831 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.79□□□□□ -1.32
TPM1-221ENST00000559831 A0A0J9YXY3 114 aa6.79□□□□□ -1.32
TPM1-221ENST00000559831 TRBV30A0A0K0K1B3 111 aa6.79□□□□□ -1.32
TPM1-221ENST00000559831 A0A0U1RRA0 63 aa6.79□□□□□ -1.32
TPM1-221ENST00000559831 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
TPM1-221ENST00000559831 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
TPM1-221ENST00000559831 PFN2P35080 140 aa6.78□□□□□ -1.32
TPM1-221ENST00000559831 LINC00158P58513 81 aa6.78□□□□□ -1.32
TPM1-221ENST00000559831 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
TPM1-221ENST00000559831 LINC00336Q6ZUF6 198 aa6.78□□□□□ -1.32
TPM1-221ENST00000559831 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
TPM1-221ENST00000559831 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
TPM1-221ENST00000559831 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
TPM1-221ENST00000559831 DLEU1O43261 78 aa6.77□□□□□ -1.33
TPM1-221ENST00000559831 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
TPM1-221ENST00000559831 TSTD3H0UI37 97 aa6.76□□□□□ -1.33
TPM1-221ENST00000559831 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
TPM1-221ENST00000559831 CIRBPQ14011 172 aaKnown RBP6.76□□□□□ -1.33
TPM1-221ENST00000559831 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
TPM1-221ENST00000559831 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
TPM1-221ENST00000559831 LINC00587B1AMM8 73 aa6.75□□□□□ -1.33
TPM1-221ENST00000559831 KRTAP10-2P60368 255 aa6.75□□□□□ -1.33
TPM1-221ENST00000559831 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
TPM1-221ENST00000559831 DAND5Q8N907 189 aa6.75□□□□□ -1.33
TPM1-221ENST00000559831 MIEN1Q9BRT3 115 aa6.75□□□□□ -1.33
TPM1-221ENST00000559831 RYR2Q92736 4967 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 TIMM17BO60830 172 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
TPM1-221ENST00000559831 NPC2P61916 151 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 GAGE2BQ13066 116 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 COX17Q14061 63 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 GAGE2EQ4V326 116 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 C2orf91Q6ZV80 131 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 GAGE2DQ9UEU5 116 aa6.74□□□□□ -1.33
TPM1-221ENST00000559831 NDUFC2-KCTD14E9PQ53 114 aa6.73□□□□□ -1.33
TPM1-221ENST00000559831 SRSF9Q13242 221 aaKnown RBP eCLIP6.73□□□□□ -1.33
TPM1-221ENST00000559831 LITAFQ99732 161 aa6.73□□□□□ -1.33
TPM1-221ENST00000559831 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
TPM1-221ENST00000559831 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
TPM1-221ENST00000559831 Q6ZRP5 223 aa6.72□□□□□ -1.33
TPM1-221ENST00000559831 HIST1H4GQ99525 98 aa6.72□□□□□ -1.33
TPM1-221ENST00000559831 IGKV2-24A0A0C4DH68 120 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 GCSHP23434 173 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 SPANXDQ9BXN6 97 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 SND1-IT1Q9HBX3 110 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 XAGE1AQ9HD64 81 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 SPANXB1Q9NS25 103 aaPredicted RBP6.71□□□□□ -1.34
TPM1-221ENST00000559831 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 PKIGQ9Y2B9 76 aa6.71□□□□□ -1.34
TPM1-221ENST00000559831 A0A096LNI7 61 aa6.7□□□□□ -1.34
TPM1-221ENST00000559831 A0A1B0GVY2 172 aa6.7□□□□□ -1.34
TPM1-221ENST00000559831 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
TPM1-221ENST00000559831 PCP4L1A6NKN8 68 aa6.69□□□□□ -1.34
TPM1-221ENST00000559831 CHTF8P0CG12 524 aa6.69□□□□□ -1.34
TPM1-221ENST00000559831 PTTG1IPP53801 180 aa6.69□□□□□ -1.34
TPM1-221ENST00000559831 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
TPM1-221ENST00000559831 SDIM1Q6ZPB5 146 aa6.69□□□□□ -1.34
TPM1-221ENST00000559831 MUSTN1Q8IVN3 82 aa6.69□□□□□ -1.34
TPM1-221ENST00000559831 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
TPM1-221ENST00000559831 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
TPM1-221ENST00000559831 DDTP30046 118 aa6.68□□□□□ -1.34
TPM1-221ENST00000559831 CTAG1AP78358 180 aa6.68□□□□□ -1.34
TPM1-221ENST00000559831 HSD52Q0P140 79 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms