RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 KIR2DL4Q99706 377 aa3.75□□□□□ -1.81
USP3-215ENST00000559771 KLK12Q9UKR0 248 aa3.75□□□□□ -1.81
USP3-215ENST00000559771 KIF25-AS1Q9Y6Z4 181 aa3.75□□□□□ -1.81
USP3-215ENST00000559771 TRBV27A0A0K0K1C4 114 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 F8VRH5 84 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 H0Y8G0 127 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 OXTP01178 125 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 POLR2KP53803 58 aaKnown RBP3.74□□□□□ -1.81
USP3-215ENST00000559771 UBE2V1Q13404 147 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 ENHOQ6UWT2 76 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 C2orf91Q6ZV80 131 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 CYSLTR1Q9Y271 337 aa3.74□□□□□ -1.81
USP3-215ENST00000559771 IGKV2D-24A0A075B6R9 120 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 H3BRM9 83 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 PANO1I0J062 215 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 MT1HL1P0DM35 61 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 UBE2D3P61077 147 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 UBE2D2P62837 147 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 SERTAD4-AS1Q5TG53 156 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 KRTAP26-1Q6PEX3 210 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 NEXN-AS1Q8NBZ9 246 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 UBE2WQ96B02 151 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 TIMM17AQ99595 171 aa3.73□□□□□ -1.81
USP3-215ENST00000559771 TRAV26-2A0A0B4J265 109 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 TRBV10-1A0A0K0K1A3 114 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 RHODO00212 210 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 GAS8-AS1O95177 125 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 MGPP08493 103 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 NMUP48645 174 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 ZC2HC1BQ5TFG8 222 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 FAM74A4Q5TZK3 123 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 C2orf66Q6UXQ4 117 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 NTM-AS1Q6ZSK4 140 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 GTF2H5Q6ZYL4 71 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 CHCHD7Q9BUK0 85 aa3.72□□□□□ -1.81
USP3-215ENST00000559771 MRPL35Q9NZE8 188 aaKnown RBP3.72□□□□□ -1.81
USP3-215ENST00000559771 CHTOPQ9Y3Y2 248 aaKnown RBP3.72□□□□□ -1.81
USP3-215ENST00000559771 TNXBP22105 4242 aa3.71□□□□□ -1.81
USP3-215ENST00000559771 TRBV7-3A0A075B6L6 115 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 TRBV6-8A0A0A6YYG3 113 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 SDHAF1A6NFY7 115 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 IGIPA6NJ69 53 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 USP17L23D6RBM5 183 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 E9PLD3 99 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 F5H697 171 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 I3L3M4 83 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 M0QY20 66 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 HERVK_113P61574 105 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 PMVKQ15126 192 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 VAMP3Q15836 100 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 SUMO4Q6EEV6 95 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 RMI2Q96E14 147 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
USP3-215ENST00000559771 TRBV25-1A0A075B6N4 114 aa3.7□□□□□ -1.82
USP3-215ENST00000559771 SMIM13P0DJ93 91 aa3.7□□□□□ -1.82
USP3-215ENST00000559771 RPL37AP61513 92 aaKnown RBP3.7□□□□□ -1.82
USP3-215ENST00000559771 SDIM1Q6ZPB5 146 aa3.7□□□□□ -1.82
USP3-215ENST00000559771 PCP2Q8IVA1 136 aa3.7□□□□□ -1.82
USP3-215ENST00000559771 C9orf163Q8N9P6 203 aa3.7□□□□□ -1.82
USP3-215ENST00000559771 OR5A1Q8NGJ0 315 aa3.7□□□□□ -1.82
USP3-215ENST00000559771 RPL39LQ96EH5 51 aaKnown RBP3.7□□□□□ -1.82
USP3-215ENST00000559771 PRR34Q9NV39 138 aa3.7□□□□□ -1.82
USP3-215ENST00000559771 MYMXA0A1B0GTQ4 84 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 C11orf86A6NJI1 115 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 CCL25O15444 150 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 RBX1P62877 108 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 RPL36AP83881 106 aaKnown RBP3.69□□□□□ -1.82
USP3-215ENST00000559771 SMAGPQ0VAQ4 97 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
USP3-215ENST00000559771 ZNF56Q15929 161 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 CEND1Q8N111 149 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 RPL36ALQ969Q0 106 aaKnown RBP3.69□□□□□ -1.82
USP3-215ENST00000559771 CST9LQ9H4G1 147 aa3.69□□□□□ -1.82
USP3-215ENST00000559771 LRP2P98164 4655 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 IGKV2D-26A0A0A0MRZ7 120 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 GAGE10A6NGK3 116 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 TMEM262E9PQX1 116 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 ANGP03950 147 aaKnown RBP3.68□□□□□ -1.82
USP3-215ENST00000559771 FABP2P12104 132 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 MIAQ16674 131 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 C14orf177Q52M58 125 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 DGAT2L7PQ6IED9 249 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 CLPSL2Q6UWE3 100 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 LINC00269Q8N2A0 174 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 C20orf203Q8NBC4 194 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 SPANXA1Q9NS26 97 aa3.68□□□□□ -1.82
USP3-215ENST00000559771 K7EP34 96 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 TSHBP01222 138 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 CNBPP62633 177 aaKnown RBP3.67□□□□□ -1.82
USP3-215ENST00000559771 GAGE6Q13070 117 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 AMMECR1LQ6DCA0 310 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 CHCHD5Q9BSY4 110 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 TIMM21Q9BVV7 248 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 VCX2Q9H322 139 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 SPANXB1Q9NS25 103 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms