RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SEC11AP67812 179 aa5.81□□□□□ -1.48
HMG20A-209ENST00000559728 SPAG11BQ08648 103 aa5.81□□□□□ -1.48
HMG20A-209ENST00000559728 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
HMG20A-209ENST00000559728 C10orf25Q5T742 122 aa5.81□□□□□ -1.48
HMG20A-209ENST00000559728 Q6ZSA8 131 aa5.81□□□□□ -1.48
HMG20A-209ENST00000559728 OR10D4PQ8NGN7 298 aa5.81□□□□□ -1.48
HMG20A-209ENST00000559728 ORAOV1Q8WV07 137 aa5.81□□□□□ -1.48
HMG20A-209ENST00000559728 F8VRH5 84 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 PANO1I0J062 215 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 XGP55808 180 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 Q6ZRU5 148 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 LINC00469Q8N7U9 141 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 C2orf48Q96LS8 159 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 PACRGQ96M98 296 aaPredicted RBP5.8□□□□□ -1.48
HMG20A-209ENST00000559728 CHAC1Q9BUX1 264 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 GEMIN7Q9H840 131 aaKnown RBP5.8□□□□□ -1.48
HMG20A-209ENST00000559728 HSPB8Q9UJY1 196 aa5.8□□□□□ -1.48
HMG20A-209ENST00000559728 CHTOPQ9Y3Y2 248 aaKnown RBP5.8□□□□□ -1.48
HMG20A-209ENST00000559728 IGLV5-39A0A0G2JS06 123 aa5.79□□□□□ -1.48
HMG20A-209ENST00000559728 APOMO95445 188 aa5.79□□□□□ -1.48
HMG20A-209ENST00000559728 SPINK8P0C7L1 97 aa5.79□□□□□ -1.48
HMG20A-209ENST00000559728 HIST3H2BBQ8N257 126 aa5.79□□□□□ -1.48
HMG20A-209ENST00000559728 SYCNQ0VAF6 134 aa5.78□□□□□ -1.48
HMG20A-209ENST00000559728 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
HMG20A-209ENST00000559728 UNQ6190/PRO20217Q6UXQ8 127 aa5.78□□□□□ -1.48
HMG20A-209ENST00000559728 Q8IZM0 81 aa5.78□□□□□ -1.48
HMG20A-209ENST00000559728 PMCHL2Q9BQD1 86 aa5.78□□□□□ -1.48
HMG20A-209ENST00000559728 C6orf48Q9UBA6 75 aa5.78□□□□□ -1.48
HMG20A-209ENST00000559728 TMEM223A0PJW6 202 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 H0Y8G0 127 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 SYS1-DBNDD2H3BUS1 97 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 CDK2AP2O75956 126 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 C3orf79P0CE67 100 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 HAMPP81172 84 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 CIRBPQ14011 172 aaKnown RBP5.77□□□□□ -1.49
HMG20A-209ENST00000559728 CARD19Q96LW7 228 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 CAMK2N2Q96S95 79 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 HIST1H2BLQ99880 126 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 ABCA13Q86UQ4 5058 aa5.77□□□□□ -1.49
HMG20A-209ENST00000559728 F8WDY8 70 aa5.76□□□□□ -1.49
HMG20A-209ENST00000559728 CHTF8P0CG12 524 aa5.76□□□□□ -1.49
HMG20A-209ENST00000559728 SNRPEP62304 92 aaKnown RBP5.76□□□□□ -1.49
HMG20A-209ENST00000559728 RNF151Q2KHN1 245 aa5.76□□□□□ -1.49
HMG20A-209ENST00000559728 LINC01545Q5VT33 79 aa5.76□□□□□ -1.49
HMG20A-209ENST00000559728 MAP1LC3CQ9BXW4 147 aa5.76□□□□□ -1.49
HMG20A-209ENST00000559728 A0A096LNI7 61 aa5.75□□□□□ -1.49
HMG20A-209ENST00000559728 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-209ENST00000559728 TMEM170BQ5T4T1 132 aa5.75□□□□□ -1.49
HMG20A-209ENST00000559728 COX7B2Q8TF08 81 aa5.75□□□□□ -1.49
HMG20A-209ENST00000559728 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
HMG20A-209ENST00000559728 H3BRM9 83 aa5.74□□□□□ -1.49
HMG20A-209ENST00000559728 NDUFA1O15239 70 aa5.74□□□□□ -1.49
HMG20A-209ENST00000559728 DPM2O94777 84 aa5.74□□□□□ -1.49
HMG20A-209ENST00000559728 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
HMG20A-209ENST00000559728 C9orf116Q5BN46 136 aaPredicted RBP5.74□□□□□ -1.49
HMG20A-209ENST00000559728 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
HMG20A-209ENST00000559728 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
HMG20A-209ENST00000559728 EPM2AB3EWF7 344 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 IGKCP01834 107 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 PLNP26678 52 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 Q6ZRP5 223 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 SCXQ7RTU7 201 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
HMG20A-209ENST00000559728 ZNF625Q96I27 306 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-209ENST00000559728 TRBV30A0A0K0K1B3 111 aa5.72□□□□□ -1.49
HMG20A-209ENST00000559728 S100A6P06703 90 aa5.72□□□□□ -1.49
HMG20A-209ENST00000559728 PRSS2P07478 247 aa5.72□□□□□ -1.49
HMG20A-209ENST00000559728 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
HMG20A-209ENST00000559728 KRTDAPP60985 99 aa5.72□□□□□ -1.49
HMG20A-209ENST00000559728 KRTAP7-1Q8IUC3 87 aa5.72□□□□□ -1.49
HMG20A-209ENST00000559728 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.49
HMG20A-209ENST00000559728 LOC107984640A0A0U1RRK4 108 aa5.71□□□□□ -1.5
HMG20A-209ENST00000559728 CXCL5P42830 114 aa5.71□□□□□ -1.5
HMG20A-209ENST00000559728 CKS1BP61024 79 aa5.71□□□□□ -1.5
HMG20A-209ENST00000559728 A0A087WYN8 130 aa5.7□□□□□ -1.5
HMG20A-209ENST00000559728 IGKV2-24A0A0C4DH68 120 aa5.7□□□□□ -1.5
HMG20A-209ENST00000559728 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
HMG20A-209ENST00000559728 C9orf118A6NHY6 69 aa5.7□□□□□ -1.5
HMG20A-209ENST00000559728 C9orf129Q5T035 196 aaKnown RBP5.7□□□□□ -1.5
HMG20A-209ENST00000559728 STPG4Q8N801 248 aa5.7□□□□□ -1.5
HMG20A-209ENST00000559728 PLAC8Q9NZF1 115 aa5.7□□□□□ -1.5
HMG20A-209ENST00000559728 IGKV2D-26A0A0A0MRZ7 120 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 E9PLD3 99 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 NDUFC2-KCTD14E9PQ53 114 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 LEPROTO15243 131 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 S100A2P29034 98 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 MAJINQ3KP22 176 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 KRTAP4-5Q9BYR2 181 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 PCLOQ9Y6V0 5065 aa5.69□□□□□ -1.5
HMG20A-209ENST00000559728 FAM168BA1KXE4 195 aa5.68□□□□□ -1.5
HMG20A-209ENST00000559728 SMR3BP02814 79 aaPredicted RBP5.68□□□□□ -1.5
HMG20A-209ENST00000559728 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
HMG20A-209ENST00000559728 RPL18AQ02543 176 aaKnown RBP5.68□□□□□ -1.5
HMG20A-209ENST00000559728 ATOH7Q8N100 152 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms