RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
CHRNA3-206ENST00000559658 DAND5Q8N907 189 aa11.42□□□□□ -0.58
CHRNA3-206ENST00000559658 APOMO95445 188 aa11.42□□□□□ -0.58
CHRNA3-206ENST00000559658 Q6ZR54 194 aa11.42□□□□□ -0.58
CHRNA3-206ENST00000559658 HIGD1BQ9P298 99 aa11.42□□□□□ -0.58
CHRNA3-206ENST00000559658 USP17L23D6RBM5 183 aa11.41□□□□□ -0.58
CHRNA3-206ENST00000559658 Q6ZRN7 208 aaPredicted RBP11.41□□□□□ -0.58
CHRNA3-206ENST00000559658 RMI2Q96E14 147 aa11.41□□□□□ -0.58
CHRNA3-206ENST00000559658 DNAH6Q9C0G6 4158 aa11.41□□□□□ -0.58
CHRNA3-206ENST00000559658 EREGO14944 169 aa11.4□□□□□ -0.58
CHRNA3-206ENST00000559658 HINT1P49773 126 aaPredicted RBP11.4□□□□□ -0.58
CHRNA3-206ENST00000559658 C9orf116Q5BN46 136 aaPredicted RBP11.4□□□□□ -0.58
CHRNA3-206ENST00000559658 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
CHRNA3-206ENST00000559658 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
CHRNA3-206ENST00000559658 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
CHRNA3-206ENST00000559658 NTN5Q8WTR8 489 aaPredicted RBP11.39□□□□□ -0.59
CHRNA3-206ENST00000559658 SACSQ9NZJ4 4579 aa11.39□□□□□ -0.59
CHRNA3-206ENST00000559658 GVQW2A0A096LPI5 108 aaPredicted RBP11.38□□□□□ -0.59
CHRNA3-206ENST00000559658 SMIM13P0DJ93 91 aa11.38□□□□□ -0.59
CHRNA3-206ENST00000559658 CKS1BP61024 79 aa11.38□□□□□ -0.59
CHRNA3-206ENST00000559658 NPC2P61916 151 aa11.38□□□□□ -0.59
CHRNA3-206ENST00000559658 SNHG12Q9BXW3 62 aa11.38□□□□□ -0.59
CHRNA3-206ENST00000559658 SLPIP03973 132 aa11.37□□□□□ -0.59
CHRNA3-206ENST00000559658 BATFQ16520 125 aa11.37□□□□□ -0.59
CHRNA3-206ENST00000559658 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
CHRNA3-206ENST00000559658 ZNF561-AS1K7EIQ3 104 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 PSCAO43653 123 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 PFN2P35080 140 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 HIST1H4GQ99525 98 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 HERV-K104P63124 156 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 HSD52Q0P140 79 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 BVES-AS1Q5T3Y7 98 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 Q6ZRU5 148 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 C6orf48Q9UBA6 75 aa11.36□□□□□ -0.59
CHRNA3-206ENST00000559658 GCSHP23434 173 aa11.35□□□□□ -0.59
CHRNA3-206ENST00000559658 FXYD2P54710 66 aa11.35□□□□□ -0.59
CHRNA3-206ENST00000559658 TM2D2Q9BX73 214 aa11.35□□□□□ -0.59
CHRNA3-206ENST00000559658 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
CHRNA3-206ENST00000559658 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
CHRNA3-206ENST00000559658 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
CHRNA3-206ENST00000559658 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
CHRNA3-206ENST00000559658 TMEM238C9JI98 176 aa11.34□□□□□ -0.59
CHRNA3-206ENST00000559658 CXCL5P42830 114 aa11.34□□□□□ -0.59
CHRNA3-206ENST00000559658 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHRNA3-206ENST00000559658 SOSTDC1Q6X4U4 206 aa11.33□□□□□ -0.6
CHRNA3-206ENST00000559658 LRCOL1A6NCL2 159 aa11.32□□□□□ -0.6
CHRNA3-206ENST00000559658 CEND1Q8N111 149 aa11.32□□□□□ -0.6
CHRNA3-206ENST00000559658 TIMM17BO60830 172 aa11.32□□□□□ -0.6
CHRNA3-206ENST00000559658 MIR7-3HGQ8N6C7 128 aa11.32□□□□□ -0.6
CHRNA3-206ENST00000559658 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
CHRNA3-206ENST00000559658 LINC00158P58513 81 aa11.31□□□□□ -0.6
CHRNA3-206ENST00000559658 MUSTN1Q8IVN3 82 aa11.31□□□□□ -0.6
CHRNA3-206ENST00000559658 SPANXDQ9BXN6 97 aa11.31□□□□□ -0.6
CHRNA3-206ENST00000559658 SPANXCQ9NY87 97 aa11.31□□□□□ -0.6
CHRNA3-206ENST00000559658 FRAS1Q86XX4 4008 aa11.3□□□□□ -0.6
CHRNA3-206ENST00000559658 C2orf48Q96LS8 159 aa11.29□□□□□ -0.6
CHRNA3-206ENST00000559658 KMT2CQ8NEZ4 4911 aaKnown RBP11.29□□□□□ -0.6
CHRNA3-206ENST00000559658 M0R143 59 aa11.29□□□□□ -0.6
CHRNA3-206ENST00000559658 TAL2Q16559 108 aa11.29□□□□□ -0.6
CHRNA3-206ENST00000559658 SFTA2Q6UW10 78 aa11.29□□□□□ -0.6
CHRNA3-206ENST00000559658 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.28□□□□□ -0.6
CHRNA3-206ENST00000559658 K7ERJ3 54 aa11.28□□□□□ -0.6
CHRNA3-206ENST00000559658 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
CHRNA3-206ENST00000559658 CIRBPQ14011 172 aaKnown RBP11.27□□□□□ -0.6
CHRNA3-206ENST00000559658 LINC00308Q8TCZ7 52 aa11.27□□□□□ -0.6
CHRNA3-206ENST00000559658 FUSP35637 526 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHRNA3-206ENST00000559658 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.61
CHRNA3-206ENST00000559658 CARD19Q96LW7 228 aa11.26□□□□□ -0.61
CHRNA3-206ENST00000559658 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
CHRNA3-206ENST00000559658 A4D1N5 150 aa11.25□□□□□ -0.61
CHRNA3-206ENST00000559658 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
CHRNA3-206ENST00000559658 Q8NDZ9 215 aa11.25□□□□□ -0.61
CHRNA3-206ENST00000559658 NHP2Q9NX24 153 aaKnown RBP11.25□□□□□ -0.61
CHRNA3-206ENST00000559658 FAT2Q9NYQ8 4349 aa11.24□□□□□ -0.61
CHRNA3-206ENST00000559658 A0A087WTM6 91 aa11.23□□□□□ -0.61
CHRNA3-206ENST00000559658 Q6ZVH6 145 aa11.23□□□□□ -0.61
CHRNA3-206ENST00000559658 SND1-IT1Q9HBX3 110 aa11.23□□□□□ -0.61
CHRNA3-206ENST00000559658 RYR2Q92736 4967 aa11.23□□□□□ -0.61
CHRNA3-206ENST00000559658 LCE6AA0A183 80 aa11.23□□□□□ -0.61
CHRNA3-206ENST00000559658 RTL8CO15255 209 aa11.23□□□□□ -0.61
CHRNA3-206ENST00000559658 COX17Q14061 63 aa11.22□□□□□ -0.61
CHRNA3-206ENST00000559658 LINC01620Q4KN68 170 aa11.22□□□□□ -0.61
CHRNA3-206ENST00000559658 Q6ZRP5 223 aa11.22□□□□□ -0.61
CHRNA3-206ENST00000559658 XAGE1AQ9HD64 81 aa11.22□□□□□ -0.61
CHRNA3-206ENST00000559658 TNP2Q05952 138 aa11.21□□□□□ -0.61
CHRNA3-206ENST00000559658 Q8N814 137 aa11.21□□□□□ -0.61
CHRNA3-206ENST00000559658 CFC1BP0CG36 223 aa11.2□□□□□ -0.62
CHRNA3-206ENST00000559658 CFC1P0CG37 223 aa11.2□□□□□ -0.62
CHRNA3-206ENST00000559658 GAGE2EQ4V326 116 aa11.2□□□□□ -0.62
CHRNA3-206ENST00000559658 GAGE2DQ9UEU5 116 aa11.2□□□□□ -0.62
CHRNA3-206ENST00000559658 IFITM1P13164 125 aa11.19□□□□□ -0.62
CHRNA3-206ENST00000559658 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
CHRNA3-206ENST00000559658 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
CHRNA3-206ENST00000559658 DNAH11Q96DT5 4516 aa11.19□□□□□ -0.62
CHRNA3-206ENST00000559658 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
CHRNA3-206ENST00000559658 F8WDY8 70 aa11.19□□□□□ -0.62
CHRNA3-206ENST00000559658 HECTD4Q9Y4D8 3996 aa11.18□□□□□ -0.62
CHRNA3-206ENST00000559658 PRR3P79522 188 aaKnown RBP11.18□□□□□ -0.62
CHRNA3-206ENST00000559658 RPL18AQ02543 176 aaKnown RBP11.18□□□□□ -0.62
CHRNA3-206ENST00000559658 RAB37Q96AX2 223 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms