RNA–Protein interactions for RNA: ENST00000559560.1

PBX1-216, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-216ENST00000559560 CKS1BP61024 79 aa14.11□□□□□ -0.15
PBX1-216ENST00000559560 C6orf226Q5I0X4 101 aa14.11□□□□□ -0.15
PBX1-216ENST00000559560 C2orf82Q6UX34 121 aa14.11□□□□□ -0.15
PBX1-216ENST00000559560 Q6ZRP5 223 aa14.09□□□□□ -0.15
PBX1-216ENST00000559560 J3QL48 77 aa14.08□□□□□ -0.16
PBX1-216ENST00000559560 ATP5LO75964 103 aa14.08□□□□□ -0.16
PBX1-216ENST00000559560 CXCL5P42830 114 aa14.08□□□□□ -0.16
PBX1-216ENST00000559560 C9orf116Q5BN46 136 aaPredicted RBP14.08□□□□□ -0.16
PBX1-216ENST00000559560 PDZD11Q5EBL8 140 aa14.08□□□□□ -0.16
PBX1-216ENST00000559560 CHCHD1Q96BP2 118 aaKnown RBP14.08□□□□□ -0.16
PBX1-216ENST00000559560 A0A1W2PNN7 141 aa14.07□□□□□ -0.16
PBX1-216ENST00000559560 SMIM1B2RUZ4 78 aa14.07□□□□□ -0.16
PBX1-216ENST00000559560 HNRNPA3P51991 378 aaKnown RBP14.07□□□□□ -0.16
PBX1-216ENST00000559560 PRR3P79522 188 aaKnown RBP14.07□□□□□ -0.16
PBX1-216ENST00000559560 PMCHL1Q16048 86 aa14.07□□□□□ -0.16
PBX1-216ENST00000559560 NDUFC2-KCTD14E9PQ53 114 aa14.06□□□□□ -0.16
PBX1-216ENST00000559560 OXTP01178 125 aa14.06□□□□□ -0.16
PBX1-216ENST00000559560 H3BRM9 83 aa14.05□□□□□ -0.16
PBX1-216ENST00000559560 NDUFA6P56556 154 aa14.05□□□□□ -0.16
PBX1-216ENST00000559560 F8VRH5 84 aa14.04□□□□□ -0.16
PBX1-216ENST00000559560 IGLC3P0DOY3 106 aa14.04□□□□□ -0.16
PBX1-216ENST00000559560 GAGE2EQ4V326 116 aa14.04□□□□□ -0.16
PBX1-216ENST00000559560 GAGE2DQ9UEU5 116 aa14.04□□□□□ -0.16
PBX1-216ENST00000559560 COX7B2Q8TF08 81 aa14.03□□□□□ -0.16
PBX1-216ENST00000559560 FAT3Q8TDW7 4589 aa14.01□□□□□ -0.17
PBX1-216ENST00000559560 TRGC2P03986 189 aa14□□□□□ -0.17
PBX1-216ENST00000559560 SPINK8P0C7L1 97 aa14□□□□□ -0.17
PBX1-216ENST00000559560 BAGE3Q86Y29 109 aa13.99□□□□□ -0.17
PBX1-216ENST00000559560 HERC1Q15751 4861 aa13.99□□□□□ -0.17
PBX1-216ENST00000559560 LRP1Q07954 4544 aaKnown RBP13.99□□□□□ -0.17
PBX1-216ENST00000559560 FAM168BA1KXE4 195 aa13.97□□□□□ -0.17
PBX1-216ENST00000559560 HSBP1O75506 76 aa13.97□□□□□ -0.17
PBX1-216ENST00000559560 PHF5AQ7RTV0 110 aaKnown RBP13.97□□□□□ -0.17
PBX1-216ENST00000559560 FAM19A5Q7Z5A7 132 aaPredicted RBP13.97□□□□□ -0.17
PBX1-216ENST00000559560 ZNF22P17026 224 aaPredicted RBP13.96□□□□□ -0.17
PBX1-216ENST00000559560 COLCA2A8K830 154 aa13.95□□□□□ -0.18
PBX1-216ENST00000559560 C9orf129Q5T035 196 aaKnown RBP13.95□□□□□ -0.18
PBX1-216ENST00000559560 IFI27L1Q96BM0 104 aa13.95□□□□□ -0.18
PBX1-216ENST00000559560 TRAV12-1A0A0B4J245 112 aa13.94□□□□□ -0.18
PBX1-216ENST00000559560 IGLV5-39A0A0G2JS06 123 aa13.94□□□□□ -0.18
PBX1-216ENST00000559560 CHTOPQ9Y3Y2 248 aaKnown RBP13.94□□□□□ -0.18
PBX1-216ENST00000559560 C11orf86A6NJI1 115 aa13.93□□□□□ -0.18
PBX1-216ENST00000559560 M0QXV9 152 aa13.92□□□□□ -0.18
PBX1-216ENST00000559560 SPINK6Q6UWN8 80 aa13.92□□□□□ -0.18
PBX1-216ENST00000559560 PSORS1C2Q9UIG4 136 aa13.92□□□□□ -0.18
PBX1-216ENST00000559560 TMEM170BQ5T4T1 132 aa13.91□□□□□ -0.18
PBX1-216ENST00000559560 FAM19A2Q8N3H0 131 aa13.9□□□□□ -0.18
PBX1-216ENST00000559560 ODF1Q14990 250 aa13.89□□□□□ -0.19
PBX1-216ENST00000559560 KRTAP7-1Q8IUC3 87 aa13.89□□□□□ -0.19
PBX1-216ENST00000559560 SERF1AO75920 110 aa13.88□□□□□ -0.19
PBX1-216ENST00000559560 SFTA2Q6UW10 78 aa13.88□□□□□ -0.19
PBX1-216ENST00000559560 XAGE1AQ9HD64 81 aa13.88□□□□□ -0.19
PBX1-216ENST00000559560 UBE2BP63146 152 aa13.87□□□□□ -0.19
PBX1-216ENST00000559560 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.19
PBX1-216ENST00000559560 C1orf137Q5JT78 98 aa13.87□□□□□ -0.19
PBX1-216ENST00000559560 LEPROTL1O95214 131 aa13.86□□□□□ -0.19
PBX1-216ENST00000559560 LINC00310P59036 64 aa13.85□□□□□ -0.19
PBX1-216ENST00000559560 REG3GQ6UW15 175 aa13.85□□□□□ -0.19
PBX1-216ENST00000559560 LBHQ53QV2 105 aaPredicted RBP13.84□□□□□ -0.19
PBX1-216ENST00000559560 SERTAD4-AS1Q5TG53 156 aa13.84□□□□□ -0.19
PBX1-216ENST00000559560 TP73-AS1Q9UF72 201 aa13.83□□□□□ -0.2
PBX1-216ENST00000559560 HSPB8Q9UJY1 196 aa13.83□□□□□ -0.2
PBX1-216ENST00000559560 C22orf24Q9Y442 160 aa13.83□□□□□ -0.2
PBX1-216ENST00000559560 TMEM223A0PJW6 202 aa13.82□□□□□ -0.2
PBX1-216ENST00000559560 PLA2G2DQ9UNK4 145 aa13.82□□□□□ -0.2
PBX1-216ENST00000559560 SCO1O75880 301 aa13.81□□□□□ -0.2
PBX1-216ENST00000559560 COX17Q14061 63 aa13.81□□□□□ -0.2
PBX1-216ENST00000559560 KRTAP11-1Q8IUC1 163 aa13.81□□□□□ -0.2
PBX1-216ENST00000559560 IGLV7-43P04211 117 aa13.8□□□□□ -0.2
PBX1-216ENST00000559560 ERG28Q9UKR5 140 aa13.8□□□□□ -0.2
PBX1-216ENST00000559560 MT1HL1P0DM35 61 aa13.79□□□□□ -0.2
PBX1-216ENST00000559560 PFN2P35080 140 aa13.79□□□□□ -0.2
PBX1-216ENST00000559560 LINC01600Q96MT4 127 aa13.79□□□□□ -0.2
PBX1-216ENST00000559560 H0Y8G0 127 aa13.78□□□□□ -0.2
PBX1-216ENST00000559560 NUPR1O60356 82 aa13.78□□□□□ -0.2
PBX1-216ENST00000559560 MRPL55Q7Z7F7 128 aaKnown RBP13.78□□□□□ -0.2
PBX1-216ENST00000559560 ZNF625Q96I27 306 aaPredicted RBP13.78□□□□□ -0.2
PBX1-216ENST00000559560 DIRC1Q969H9 104 aa13.76□□□□□ -0.21
PBX1-216ENST00000559560 IGLV5-37A0A075B6J1 123 aa13.75□□□□□ -0.21
PBX1-216ENST00000559560 FABP4P15090 132 aa13.75□□□□□ -0.21
PBX1-216ENST00000559560 PLNP26678 52 aa13.75□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BKO60814 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BJP06899 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BOP23527 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BBP33778 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BDP58876 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BCP62807 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST2H2BEQ16778 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BHQ93079 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BNQ99877 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 HIST1H2BMQ99879 126 aa13.74□□□□□ -0.21
PBX1-216ENST00000559560 NKAPP1Q8N9T2 125 aa13.73□□□□□ -0.21
PBX1-216ENST00000559560 SND1-IT1Q9HBX3 110 aa13.72□□□□□ -0.21
PBX1-216ENST00000559560 TNXBP22105 4242 aa13.71□□□□□ -0.21
PBX1-216ENST00000559560 MAP1LC3CQ9BXW4 147 aa13.71□□□□□ -0.21
PBX1-216ENST00000559560 H0Y9J4 135 aa13.7□□□□□ -0.22
PBX1-216ENST00000559560 DPM2O94777 84 aa13.7□□□□□ -0.22
PBX1-216ENST00000559560 LINC00167Q96N53 147 aa13.7□□□□□ -0.22
PBX1-216ENST00000559560 HERV-K104P63124 156 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms