RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 Q6ZRU5 148 aa9.55□□□□□ -0.88
SNRPA1-207ENST00000559309 COX7B2Q8TF08 81 aa9.55□□□□□ -0.88
SNRPA1-207ENST00000559309 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNRPA1-207ENST00000559309 AKR1D1P51857 326 aa9.54□□□□□ -0.88
SNRPA1-207ENST00000559309 SYCNQ0VAF6 134 aa9.54□□□□□ -0.88
SNRPA1-207ENST00000559309 C10orf25Q5T742 122 aa9.54□□□□□ -0.88
SNRPA1-207ENST00000559309 IGLV5-52A0A0A0MRZ9 124 aa9.53□□□□□ -0.88
SNRPA1-207ENST00000559309 C20orf202A1L168 122 aa9.53□□□□□ -0.88
SNRPA1-207ENST00000559309 CXCL5P42830 114 aa9.53□□□□□ -0.88
SNRPA1-207ENST00000559309 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
SNRPA1-207ENST00000559309 ZNF625Q96I27 306 aaPredicted RBP9.53□□□□□ -0.88
SNRPA1-207ENST00000559309 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 TRBV30A0A0K0K1B3 111 aa9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 E9PLD3 99 aa9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
SNRPA1-207ENST00000559309 NDUFA1O15239 70 aa9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 LEPROTO15243 131 aa9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 JOSD1Q15040 202 aaPredicted RBP9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 Q6ZSA8 131 aa9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 HSPG2P98160 4391 aa9.51□□□□□ -0.89
SNRPA1-207ENST00000559309 GCSHP23434 173 aa9.5□□□□□ -0.89
SNRPA1-207ENST00000559309 KRTAP10-1P60331 282 aa9.5□□□□□ -0.89
SNRPA1-207ENST00000559309 CIRBPQ14011 172 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-207ENST00000559309 STPG4Q8N801 248 aa9.5□□□□□ -0.89
SNRPA1-207ENST00000559309 TOMM7Q9P0U1 55 aa9.5□□□□□ -0.89
SNRPA1-207ENST00000559309 PRSS2P07478 247 aa9.49□□□□□ -0.89
SNRPA1-207ENST00000559309 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
SNRPA1-207ENST00000559309 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
SNRPA1-207ENST00000559309 HERVK_113P61574 105 aa9.48□□□□□ -0.89
SNRPA1-207ENST00000559309 LINC01620Q4KN68 170 aa9.48□□□□□ -0.89
SNRPA1-207ENST00000559309 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
SNRPA1-207ENST00000559309 J3QQQ9 107 aa9.47□□□□□ -0.89
SNRPA1-207ENST00000559309 CKS1BP61024 79 aa9.47□□□□□ -0.89
SNRPA1-207ENST00000559309 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
SNRPA1-207ENST00000559309 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
SNRPA1-207ENST00000559309 C16orf90A8MZG2 172 aa9.46□□□□□ -0.9
SNRPA1-207ENST00000559309 NMUP48645 174 aa9.46□□□□□ -0.9
SNRPA1-207ENST00000559309 PYY3Q5JQD4 70 aa9.46□□□□□ -0.9
SNRPA1-207ENST00000559309 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
SNRPA1-207ENST00000559309 PANO1I0J062 215 aa9.45□□□□□ -0.9
SNRPA1-207ENST00000559309 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
SNRPA1-207ENST00000559309 C9orf116Q5BN46 136 aaPredicted RBP9.45□□□□□ -0.9
SNRPA1-207ENST00000559309 FAM30AQ9NZY2 134 aa9.45□□□□□ -0.9
SNRPA1-207ENST00000559309 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
SNRPA1-207ENST00000559309 SCGB1D1O95968 90 aa9.44□□□□□ -0.9
SNRPA1-207ENST00000559309 Q6ZRP5 223 aa9.44□□□□□ -0.9
SNRPA1-207ENST00000559309 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
SNRPA1-207ENST00000559309 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
SNRPA1-207ENST00000559309 A0A096LNI7 61 aa9.43□□□□□ -0.9
SNRPA1-207ENST00000559309 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
SNRPA1-207ENST00000559309 HERV-K104P63124 156 aa9.43□□□□□ -0.9
SNRPA1-207ENST00000559309 COX17Q14061 63 aa9.43□□□□□ -0.9
SNRPA1-207ENST00000559309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
SNRPA1-207ENST00000559309 PTTG1IPP53801 180 aa9.42□□□□□ -0.9
SNRPA1-207ENST00000559309 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
SNRPA1-207ENST00000559309 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
SNRPA1-207ENST00000559309 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
SNRPA1-207ENST00000559309 LOC105371267A0A1B0GV96 52 aa9.41□□□□□ -0.9
SNRPA1-207ENST00000559309 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
SNRPA1-207ENST00000559309 XGP55808 180 aa9.4□□□□□ -0.9
SNRPA1-207ENST00000559309 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
SNRPA1-207ENST00000559309 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
SNRPA1-207ENST00000559309 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
SNRPA1-207ENST00000559309 LITAFQ99732 161 aa9.39□□□□□ -0.91
SNRPA1-207ENST00000559309 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
SNRPA1-207ENST00000559309 FAT1Q14517 4588 aa9.38□□□□□ -0.91
SNRPA1-207ENST00000559309 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
SNRPA1-207ENST00000559309 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
SNRPA1-207ENST00000559309 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
SNRPA1-207ENST00000559309 PCP2Q8IVA1 136 aa9.38□□□□□ -0.91
SNRPA1-207ENST00000559309 LINC00474Q9P2X8 69 aa9.38□□□□□ -0.91
SNRPA1-207ENST00000559309 LOC107984156A0A0G2JMH3 177 aa9.37□□□□□ -0.91
SNRPA1-207ENST00000559309 ARL17AQ8IVW1 177 aa9.37□□□□□ -0.91
SNRPA1-207ENST00000559309 PLAC8Q9NZF1 115 aa9.37□□□□□ -0.91
SNRPA1-207ENST00000559309 LINC00587B1AMM8 73 aa9.36□□□□□ -0.91
SNRPA1-207ENST00000559309 HSBP1L1C9JCN9 74 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 DLEU1O43261 78 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 TIMM17BO60830 172 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 SMIM13P0DJ93 91 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 SCXQ7RTU7 201 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 BOD1L2Q8IYS8 172 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 PLA2G2DQ9UNK4 145 aa9.35□□□□□ -0.91
SNRPA1-207ENST00000559309 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
SNRPA1-207ENST00000559309 PFN2P35080 140 aa9.34□□□□□ -0.91
SNRPA1-207ENST00000559309 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
SNRPA1-207ENST00000559309 A0A087WYN8 130 aa9.33□□□□□ -0.92
SNRPA1-207ENST00000559309 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
SNRPA1-207ENST00000559309 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
SNRPA1-207ENST00000559309 COX8AP10176 69 aa9.33□□□□□ -0.92
SNRPA1-207ENST00000559309 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
SNRPA1-207ENST00000559309 VAMP8Q9BV40 100 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms