RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 FAM19A5Q7Z5A7 132 aaPredicted RBP4.52□□□□□ -1.69
SPG11-213ENST00000558988 ORMDL3Q8N138 153 aa4.52□□□□□ -1.69
SPG11-213ENST00000558988 LINC01600Q96MT4 127 aa4.52□□□□□ -1.69
SPG11-213ENST00000558988 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
SPG11-213ENST00000558988 TRBV24-1A0A075B6N3 115 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 A0A1B0GXF2 115 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 FAM168BA1KXE4 195 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 NDUFA1O15239 70 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 IFI27P40305 119 aaPredicted RBP4.51□□□□□ -1.69
SPG11-213ENST00000558988 ZC2HC1BQ5TFG8 222 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 TMEM136Q6ZRR5 245 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 OR10D4PQ8NGN7 298 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
SPG11-213ENST00000558988 A0A087WZ39 114 aa4.5□□□□□ -1.69
SPG11-213ENST00000558988 PPBPP02775 128 aa4.5□□□□□ -1.69
SPG11-213ENST00000558988 RPL32P62910 135 aaKnown RBP4.5□□□□□ -1.69
SPG11-213ENST00000558988 C2orf82Q6UX34 121 aa4.5□□□□□ -1.69
SPG11-213ENST00000558988 FAM104AQ969W3 186 aa4.5□□□□□ -1.69
SPG11-213ENST00000558988 MAP1LC3AQ9H492 121 aa4.5□□□□□ -1.69
SPG11-213ENST00000558988 PAM16Q9Y3D7 125 aa4.5□□□□□ -1.69
SPG11-213ENST00000558988 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 IGHV3OR16-9A0A0B4J2B5 98 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 F8WDY8 70 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 UBE2BP63146 152 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
SPG11-213ENST00000558988 TEX43Q6ZNM6 134 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 IMMP2LQ96T52 175 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 C2orf88Q9BSF0 95 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 SMDT1Q9H4I9 107 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 MRPL35Q9NZE8 188 aaKnown RBP4.49□□□□□ -1.69
SPG11-213ENST00000558988 TOMM7Q9P0U1 55 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 C6orf48Q9UBA6 75 aa4.49□□□□□ -1.69
SPG11-213ENST00000558988 MT-ND4LP03901 98 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 RAB14P61106 215 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 SRSF9Q13242 221 aaKnown RBP eCLIP4.48□□□□□ -1.69
SPG11-213ENST00000558988 LINC00242Q5T6M2 205 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 Q6ZN92 141 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 ATP5L2Q7Z4Y8 100 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 URB1-AS1Q96HZ7 61 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 PACRGQ96M98 296 aaPredicted RBP4.48□□□□□ -1.69
SPG11-213ENST00000558988 CYSLTR1Q9Y271 337 aa4.48□□□□□ -1.69
SPG11-213ENST00000558988 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
SPG11-213ENST00000558988 M0QXV9 152 aa4.47□□□□□ -1.69
SPG11-213ENST00000558988 ATP6V1G1O75348 118 aa4.47□□□□□ -1.69
SPG11-213ENST00000558988 PRSS2P07478 247 aa4.47□□□□□ -1.69
SPG11-213ENST00000558988 KRTAP11-1Q8IUC1 163 aa4.47□□□□□ -1.69
SPG11-213ENST00000558988 LINC00469Q8N7U9 141 aa4.47□□□□□ -1.69
SPG11-213ENST00000558988 IGLV7-43P04211 117 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 UBE2D1P51668 147 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 KRTAP10-8P60410 259 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 CKS1BP61024 79 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 Q8N8P6 123 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 PRR26Q8N8Z3 221 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 VCX2Q9H322 139 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.7
SPG11-213ENST00000558988 PNRC1Q12796 327 aaPredicted RBP4.45□□□□□ -1.7
SPG11-213ENST00000558988 KIAA0087Q14695 138 aa4.45□□□□□ -1.7
SPG11-213ENST00000558988 ORMDL2Q53FV1 153 aa4.45□□□□□ -1.7
SPG11-213ENST00000558988 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
SPG11-213ENST00000558988 GEMIN7Q9H840 131 aaKnown RBP4.45□□□□□ -1.7
SPG11-213ENST00000558988 XAGE1AQ9HD64 81 aa4.45□□□□□ -1.7
SPG11-213ENST00000558988 LAMTOR2Q9Y2Q5 125 aa4.45□□□□□ -1.7
SPG11-213ENST00000558988 PYGO1Q9Y3Y4 419 aa4.45□□□□□ -1.7
SPG11-213ENST00000558988 TRBV30A0A0K0K1B3 111 aa4.44□□□□□ -1.7
SPG11-213ENST00000558988 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
SPG11-213ENST00000558988 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
SPG11-213ENST00000558988 C6orf226Q5I0X4 101 aa4.44□□□□□ -1.7
SPG11-213ENST00000558988 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
SPG11-213ENST00000558988 LINC00173Q6ZV60 143 aa4.44□□□□□ -1.7
SPG11-213ENST00000558988 ALKBH7Q9BT30 221 aaPredicted RBP4.44□□□□□ -1.7
SPG11-213ENST00000558988 H0Y9J4 135 aa4.43□□□□□ -1.7
SPG11-213ENST00000558988 TLX1NBP0CAT3 122 aa4.43□□□□□ -1.7
SPG11-213ENST00000558988 KRTAP7-1Q8IUC3 87 aa4.43□□□□□ -1.7
SPG11-213ENST00000558988 NXT2Q9NPJ8 142 aaKnown RBP4.43□□□□□ -1.7
SPG11-213ENST00000558988 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
SPG11-213ENST00000558988 IGIPA6NJ69 53 aa4.42□□□□□ -1.7
SPG11-213ENST00000558988 PAPPA-AS1Q5QFB9 102 aa4.42□□□□□ -1.7
SPG11-213ENST00000558988 Q75L30 129 aa4.42□□□□□ -1.7
SPG11-213ENST00000558988 SCGB3A1Q96QR1 104 aa4.42□□□□□ -1.7
SPG11-213ENST00000558988 AMELXQ99217 191 aa4.42□□□□□ -1.7
SPG11-213ENST00000558988 ADCYAP1P18509 176 aa4.41□□□□□ -1.7
SPG11-213ENST00000558988 HERVK_113P63121 156 aa4.41□□□□□ -1.7
SPG11-213ENST00000558988 SEC11AP67812 179 aa4.41□□□□□ -1.7
SPG11-213ENST00000558988 Q8IZM0 81 aa4.41□□□□□ -1.7
SPG11-213ENST00000558988 F8VRH5 84 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 SPINK8P0C7L1 97 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 S100PP25815 95 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 NDUFA6P56556 154 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 RAB5BP61020 215 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 TOMM6Q96B49 74 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
SPG11-213ENST00000558988 A0A0U1RRA0 63 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 RPL37AP8A6NKH3 93 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms