RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 MPDZO75970 2070 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 CPSF1Q10570 1443 aaKnown RBP1.76□□□□□ -2.13
LRRC28-212ENST00000558911 MYH8P13535 1937 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 TRBV6-8A0A0A6YYG3 113 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 RBAKDNA6NC62 111 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 F8W1H4 67 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 IGKCP01834 107 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 MT-ATP8P03928 68 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 SLC25A6P12236 298 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 SNCAP37840 140 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 UBE2G1P62253 170 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 Q1T7F1 81 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 RPL7L1Q6DKI1 246 aaKnown RBP1.76□□□□□ -2.13
LRRC28-212ENST00000558911 SLC48A1Q6P1K1 146 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 KRTAP26-1Q6PEX3 210 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 UNQ5815/PRO19632Q6UWF5 114 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 ZNF431Q8TF32 576 aaPredicted RBP1.76□□□□□ -2.13
LRRC28-212ENST00000558911 TMEM141Q96I45 108 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 VAMP8Q9BV40 100 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 SCP2D1Q9UJQ7 156 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 AP4S1Q9Y587 144 aa1.76□□□□□ -2.13
LRRC28-212ENST00000558911 DAPK1P53355 1430 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 TRAV2A0A0B4J234 112 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 H3BRN7 92 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 ASIPP42127 132 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 IQCJQ1A5X6 159 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 C5orf38Q86SI9 138 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 SBSPONQ8IVN8 264 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 LINC00052Q96N35 136 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 DPY30Q9C005 99 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 PRO1933Q9H354 126 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 TMEM106BQ9NUM4 274 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 PTPRDP23468 1912 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 WNK2Q9Y3S1 2297 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 FREM3P0C091 2139 aa1.75□□□□□ -2.13
LRRC28-212ENST00000558911 DNAH10Q8IVF4 4471 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 IGKV1D-17A0A075B6S4 117 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 TMEM30CPA0ZSE6 113 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 ATP5EP56381 51 aaPredicted RBP1.74□□□□□ -2.13
LRRC28-212ENST00000558911 CNBPP62633 177 aaKnown RBP1.74□□□□□ -2.13
LRRC28-212ENST00000558911 SPTSSBQ8NFR3 76 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 OR10AG1Q8NH19 301 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 PPDPFLQ8WWR9 84 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 LIMD2Q9BT23 127 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 DPH3P1Q9H4G8 78 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 ORMDL1Q9P0S3 153 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 LINC00312Q9Y6C7 94 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 PARP14Q460N5 1801 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 TNRC6AQ8NDV7 1962 aaKnown RBP1.74□□□□□ -2.13
LRRC28-212ENST00000558911 TCHHQ07283 1943 aa1.74□□□□□ -2.13
LRRC28-212ENST00000558911 NINQ8N4C6 2090 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 STARD9Q9P2P6 4700 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 PKHD1L1Q86WI1 4243 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 TRGV4A0A0C4DH28 118 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 UBE2L5PA0A1B0GUS4 154 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 H3BRM9 83 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 COX7CP15954 63 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 CBLN1P23435 193 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 UBE2L3P68036 154 aaKnown RBP1.73□□□□□ -2.13
LRRC28-212ENST00000558911 RHOHQ15669 191 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 CSAG1Q6PB30 78 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 PATE1Q8WXA2 126 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 MED12LQ86YW9 2145 aa1.73□□□□□ -2.13
LRRC28-212ENST00000558911 ASCC3Q8N3C0 2202 aaKnown RBP1.72□□□□□ -2.13
LRRC28-212ENST00000558911 PIGBOS1A0A0B4J2F0 54 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 A6NIN4 97 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 CCL16O15467 120 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 SSSCA1O60232 199 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 LINC00032P0C843 101 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 RNASE2P10153 161 aaKnown RBP1.72□□□□□ -2.13
LRRC28-212ENST00000558911 DCDP81605 110 aaKnown RBP1.72□□□□□ -2.13
LRRC28-212ENST00000558911 SPRNQ5BIV9 151 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 C9orf116Q5BN46 136 aaPredicted RBP1.72□□□□□ -2.13
LRRC28-212ENST00000558911 FAM74A1Q5RGS3 127 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 C10orf55Q5SWW7 151 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 LYPD5Q6UWN5 251 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 LINC00304Q8N9R0 145 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 C10orf82Q8WW14 230 aa1.72□□□□□ -2.13
LRRC28-212ENST00000558911 TANC1Q9C0D5 1861 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 TRBV10-3A0A0K0K1G6 114 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 CXorf51AA0A1B0GTR3 108 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 GNGT2O14610 69 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 IGHV3-33P01772 117 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 IGLC1P0CG04 106 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 PYY3Q5JQD4 70 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 COMMD6Q7Z4G1 85 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 TXNDC17Q9BRA2 123 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 TTTY12Q9BZ98 90 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 GCC2Q8IWJ2 1684 aa1.71□□□□□ -2.14
LRRC28-212ENST00000558911 DOCK2Q92608 1830 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 TRBV6-4A0A1B0GX49 114 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 PPYP01298 95 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 RNASE3P12724 160 aaKnown RBP1.7□□□□□ -2.14
LRRC28-212ENST00000558911 CR1P17927 2039 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 IFI27L1Q96BM0 104 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 ODF3Q96PU9 254 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 PMCHL2Q9BQD1 86 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms