RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 C16orf90A8MZG2 172 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 LECT2O14960 151 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 CRPP02741 224 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 LINC01545Q5VT33 79 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 C5orf38Q86SI9 138 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 CDKN2A-AS1Q9UH64 79 aa4.71□□□□□ -1.66
TRAF3-206ENST00000558880 USP17L23D6RBM5 183 aa4.7□□□□□ -1.66
TRAF3-206ENST00000558880 F8VRH5 84 aa4.7□□□□□ -1.66
TRAF3-206ENST00000558880 PRSS1P07477 247 aa4.7□□□□□ -1.66
TRAF3-206ENST00000558880 SMAGPQ0VAQ4 97 aa4.7□□□□□ -1.66
TRAF3-206ENST00000558880 SS18Q15532 418 aa4.7□□□□□ -1.66
TRAF3-206ENST00000558880 Q6ZN92 141 aa4.7□□□□□ -1.66
TRAF3-206ENST00000558880 HSPB8Q9UJY1 196 aa4.7□□□□□ -1.66
TRAF3-206ENST00000558880 CHTOPQ9Y3Y2 248 aaKnown RBP4.7□□□□□ -1.66
TRAF3-206ENST00000558880 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
TRAF3-206ENST00000558880 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 SMIM1B2RUZ4 78 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 CDK2AP2O75956 126 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 PAPPA-AS1Q5QFB9 102 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 LINC01561Q8N1V8 128 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 Q8N814 137 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 LINC00526Q96FQ7 95 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 CHAC1Q9BUX1 264 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 TM2D2Q9BX73 214 aa4.69□□□□□ -1.66
TRAF3-206ENST00000558880 DMBT1Q9UGM3 2413 aaPredicted RBP4.68□□□□□ -1.66
TRAF3-206ENST00000558880 IGHV3-64A0A075B6Q5 118 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 TMEM223A0PJW6 202 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 COX7A2LO14548 114 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 S100A6P06703 90 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 HERVK_113P63121 156 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 PET117Q6UWS5 81 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 RMI2Q96E14 147 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 C2orf88Q9BSF0 95 aa4.68□□□□□ -1.66
TRAF3-206ENST00000558880 H0Y8G0 127 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 SPINK8P0C7L1 97 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 INAFM2P0DMQ5 153 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 TSPEAR-AS2P59090 65 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 KRTDAPP60985 99 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 HIGD2BQ4VC39 106 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 C10orf25Q5T742 122 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 OR10D4PQ8NGN7 298 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 MAP1LC3CQ9BXW4 147 aa4.67□□□□□ -1.66
TRAF3-206ENST00000558880 IGHV1-58A0A0C4DH39 117 aa4.66□□□□□ -1.66
TRAF3-206ENST00000558880 MAJINQ3KP22 176 aa4.66□□□□□ -1.66
TRAF3-206ENST00000558880 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
TRAF3-206ENST00000558880 IGKV2D-26A0A0A0MRZ7 120 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 LOC105371267A0A1B0GV96 52 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 EPM2AB3EWF7 344 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 PSCAO43653 123 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 DPM2O94777 84 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 IGKCP01834 107 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 CNBPP62633 177 aaKnown RBP4.65□□□□□ -1.67
TRAF3-206ENST00000558880 SEC11AP67812 179 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 LINC01620Q4KN68 170 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 PYY3Q5JQD4 70 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 C2orf82Q6UX34 121 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 Q6ZRU5 148 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 STPG4Q8N801 248 aa4.65□□□□□ -1.67
TRAF3-206ENST00000558880 GEMIN7Q9H840 131 aaKnown RBP4.65□□□□□ -1.67
TRAF3-206ENST00000558880 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.64□□□□□ -1.67
TRAF3-206ENST00000558880 PANO1I0J062 215 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 S100A2P29034 98 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 KRTAP10-1P60331 282 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 SPAG11BQ08648 103 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 JOSD1Q15040 202 aaPredicted RBP4.64□□□□□ -1.67
TRAF3-206ENST00000558880 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 ATOH7Q8N100 152 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 ORAOV1Q8WV07 137 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 ZNF625Q96I27 306 aaPredicted RBP4.64□□□□□ -1.67
TRAF3-206ENST00000558880 C2orf48Q96LS8 159 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 C6orf48Q9UBA6 75 aa4.64□□□□□ -1.67
TRAF3-206ENST00000558880 hDV102S1A0JD36 115 aa4.63□□□□□ -1.67
TRAF3-206ENST00000558880 PLNP26678 52 aa4.63□□□□□ -1.67
TRAF3-206ENST00000558880 SDIM1Q6ZPB5 146 aa4.63□□□□□ -1.67
TRAF3-206ENST00000558880 Q8IZM0 81 aa4.63□□□□□ -1.67
TRAF3-206ENST00000558880 C9orf163Q8N9P6 203 aa4.63□□□□□ -1.67
TRAF3-206ENST00000558880 TTTY13Q9BZ97 58 aa4.63□□□□□ -1.67
TRAF3-206ENST00000558880 E9PLD3 99 aa4.62□□□□□ -1.67
TRAF3-206ENST00000558880 C9orf116Q5BN46 136 aaPredicted RBP4.62□□□□□ -1.67
TRAF3-206ENST00000558880 CFAP161Q6P656 301 aa4.62□□□□□ -1.67
TRAF3-206ENST00000558880 KRTAP7-1Q8IUC3 87 aa4.62□□□□□ -1.67
TRAF3-206ENST00000558880 COX7B2Q8TF08 81 aa4.62□□□□□ -1.67
TRAF3-206ENST00000558880 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
TRAF3-206ENST00000558880 LEPROTO15243 131 aa4.61□□□□□ -1.67
TRAF3-206ENST00000558880 APOMO95445 188 aa4.61□□□□□ -1.67
TRAF3-206ENST00000558880 Q6ZSA8 131 aa4.61□□□□□ -1.67
TRAF3-206ENST00000558880 TP73-AS1Q9UF72 201 aa4.61□□□□□ -1.67
TRAF3-206ENST00000558880 IGLV5-52A0A0A0MRZ9 124 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 H3BRM9 83 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 SYCNQ0VAF6 134 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 CIRBPQ14011 172 aaKnown RBP4.6□□□□□ -1.67
TRAF3-206ENST00000558880 C14orf177Q52M58 125 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 Q6ZRP5 223 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 PCP2Q8IVA1 136 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 LITAFQ99732 161 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 TOMM7Q9P0U1 55 aa4.6□□□□□ -1.67
TRAF3-206ENST00000558880 F8WDY8 70 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 J3QQQ9 107 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms