RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 GYPAP02724 150 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 ACYP2P14621 99 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 UBE2D3P61077 147 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 UBE2D2P62837 147 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 C6orf52Q5T4I8 152 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 Q5VV11 94 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 DEFB107AQ8IZN7 70 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 TRGV9Q99603 122 aa1.42□□□□□ -2.18
TDP1-217ENST00000557782 A0A096LNT2 108 aa1.41□□□□□ -2.18
TDP1-217ENST00000557782 F2Z2F3 143 aa1.41□□□□□ -2.18
TDP1-217ENST00000557782 FAUP35544 74 aaKnown RBP1.41□□□□□ -2.18
TDP1-217ENST00000557782 FXYD6P3P58550 94 aa1.41□□□□□ -2.18
TDP1-217ENST00000557782 SERP2Q8N6R1 65 aa1.41□□□□□ -2.18
TDP1-217ENST00000557782 AMELXQ99217 191 aa1.41□□□□□ -2.18
TDP1-217ENST00000557782 CDC42SE2Q9NRR3 84 aa1.41□□□□□ -2.18
TDP1-217ENST00000557782 ZNF462Q96JM2 2506 aa1.4□□□□□ -2.18
TDP1-217ENST00000557782 CTXND1A0A1B0GTU2 59 aa1.4□□□□□ -2.19
TDP1-217ENST00000557782 F8VRH5 84 aa1.4□□□□□ -2.19
TDP1-217ENST00000557782 M0R135 149 aa1.4□□□□□ -2.19
TDP1-217ENST00000557782 APOC3P02656 99 aa1.4□□□□□ -2.19
TDP1-217ENST00000557782 NCBP2-AS2Q69YL0 99 aa1.4□□□□□ -2.19
TDP1-217ENST00000557782 VMO1Q7Z5L0 202 aa1.4□□□□□ -2.19
TDP1-217ENST00000557782 PIEZO1Q92508 2521 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 TRAV1-2A0A0B4J238 106 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 TRBV7-7A0A0K0K1E9 115 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 IGLC7A0M8Q6 106 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 TMEM14DPA8MWL7 114 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 BAGE2Q86Y30 109 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 NPVFQ9HCQ7 196 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 FBN1P35555 2871 aaKnown RBP1.39□□□□□ -2.19
TDP1-217ENST00000557782 CNTRLQ7Z7A1 2325 aa1.39□□□□□ -2.19
TDP1-217ENST00000557782 A0A087WXM4 84 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 UQCR11O14957 56 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 LY6G6CO95867 125 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 ARL14EPLP0DKL9 152 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 RPL37P61927 97 aaKnown RBP1.38□□□□□ -2.19
TDP1-217ENST00000557782 SFTA2Q6UW10 78 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 RPS27LQ71UM5 84 aaKnown RBP1.38□□□□□ -2.19
TDP1-217ENST00000557782 SMIM11BQ8TCY0 68 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 SMIM4Q8WVI0 70 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 BPESC1Q9GZL8 116 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 CACFD1Q9UGQ2 172 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 LINC01558Q9Y6Z2 57 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 COL4A6Q14031 1691 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 TRANK1O15050 2925 aa1.38□□□□□ -2.19
TDP1-217ENST00000557782 SPINT3P49223 89 aa1.37□□□□□ -2.19
TDP1-217ENST00000557782 PYY3Q5JQD4 70 aa1.37□□□□□ -2.19
TDP1-217ENST00000557782 DEFB106AQ8N104 65 aa1.37□□□□□ -2.19
TDP1-217ENST00000557782 PRO1933Q9H354 126 aa1.37□□□□□ -2.19
TDP1-217ENST00000557782 NXT2Q9NPJ8 142 aaKnown RBP1.37□□□□□ -2.19
TDP1-217ENST00000557782 ARL2-SNX15V9GYD0 113 aa1.37□□□□□ -2.19
TDP1-217ENST00000557782 F5P12259 2224 aa1.37□□□□□ -2.19
TDP1-217ENST00000557782 ZDBF2Q9HCK1 2354 aa1.37□□□□□ -2.19
TDP1-217ENST00000557782 A0A0C4DFX4 3053 aa1.36□□□□□ -2.19
TDP1-217ENST00000557782 SYS1-DBNDD2H3BUS1 97 aa1.36□□□□□ -2.19
TDP1-217ENST00000557782 K7EIL1 84 aa1.36□□□□□ -2.19
TDP1-217ENST00000557782 CCL22O00626 93 aa1.36□□□□□ -2.19
TDP1-217ENST00000557782 MAST4O15021 2626 aa1.36□□□□□ -2.19
TDP1-217ENST00000557782 S100ZQ8WXG8 99 aa1.36□□□□□ -2.19
TDP1-217ENST00000557782 KNTC1P50748 2209 aa1.36□□□□□ -2.19
TDP1-217ENST00000557782 TNRC18O15417 2968 aaPredicted RBP1.35□□□□□ -2.19
TDP1-217ENST00000557782 GOLGB1Q14789 3259 aaKnown RBP1.35□□□□□ -2.19
TDP1-217ENST00000557782 GVQW2A0A096LPI5 108 aaPredicted RBP1.35□□□□□ -2.19
TDP1-217ENST00000557782 SAA2P0DJI9 122 aaPredicted RBP1.35□□□□□ -2.19
TDP1-217ENST00000557782 COX17Q14061 63 aa1.35□□□□□ -2.19
TDP1-217ENST00000557782 PMCHL1Q16048 86 aa1.35□□□□□ -2.19
TDP1-217ENST00000557782 Q5BKY6 102 aa1.35□□□□□ -2.19
TDP1-217ENST00000557782 CFAP126Q5VTH2 177 aa1.35□□□□□ -2.19
TDP1-217ENST00000557782 DNAH12Q6ZR08 3092 aa1.35□□□□□ -2.19
TDP1-217ENST00000557782 USP9XQ93008 2570 aaPredicted RBP1.35□□□□□ -2.19
TDP1-217ENST00000557782 NAV2Q8IVL1 2488 aa1.34□□□□□ -2.19
TDP1-217ENST00000557782 MYO7BQ6PIF6 2116 aa1.34□□□□□ -2.19
TDP1-217ENST00000557782 TRBV25-1A0A075B6N4 114 aa1.34□□□□□ -2.19
TDP1-217ENST00000557782 H7BZZ5 65 aa1.34□□□□□ -2.19
TDP1-217ENST00000557782 ZNF137PP52743 207 aa1.34□□□□□ -2.19
TDP1-217ENST00000557782 RPL38P63173 70 aaKnown RBP1.34□□□□□ -2.19
TDP1-217ENST00000557782 Q6ZRX8 168 aa1.34□□□□□ -2.19
TDP1-217ENST00000557782 LCN9Q8WX39 176 aa1.34□□□□□ -2.19
TDP1-217ENST00000557782 COL6A6A6NMZ7 2263 aa1.34□□□□□ -2.2
TDP1-217ENST00000557782 MYO7AQ13402 2215 aa1.34□□□□□ -2.2
TDP1-217ENST00000557782 PCNTO95613 3336 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 ROS1P08922 2347 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 BDP1A6H8Y1 2624 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 K7EP34 96 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 MGPP08493 103 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 GCHFRP30047 84 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
TDP1-217ENST00000557782 FAM223AQ8IWN6 122 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 C20orf78Q9BR46 151 aa1.33□□□□□ -2.2
TDP1-217ENST00000557782 SETXQ7Z333 2677 aaKnown RBP1.33□□□□□ -2.2
TDP1-217ENST00000557782 FASNP49327 2511 aaKnown RBP1.32□□□□□ -2.2
TDP1-217ENST00000557782 UTRNP46939 3433 aa1.32□□□□□ -2.2
TDP1-217ENST00000557782 A0A1B0GWA3 101 aa1.32□□□□□ -2.2
TDP1-217ENST00000557782 CYB5AP00167 134 aa1.32□□□□□ -2.2
TDP1-217ENST00000557782 S100A3P33764 101 aa1.32□□□□□ -2.2
TDP1-217ENST00000557782 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
TDP1-217ENST00000557782 PRR15LQ9BU68 103 aa1.32□□□□□ -2.2
TDP1-217ENST00000557782 ANKRD11Q6UB99 2663 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms