RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 Q6ZRP5 223 aa7.17□□□□□ -1.26
LINC00648-204ENST00000557749 PACRGQ96M98 296 aaPredicted RBP7.17□□□□□ -1.26
LINC00648-204ENST00000557749 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
LINC00648-204ENST00000557749 HERC1Q15751 4861 aa7.16□□□□□ -1.26
LINC00648-204ENST00000557749 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.16□□□□□ -1.26
LINC00648-204ENST00000557749 PRSS2P07478 247 aa7.16□□□□□ -1.26
LINC00648-204ENST00000557749 TLX1NBP0CAT3 122 aa7.16□□□□□ -1.26
LINC00648-204ENST00000557749 IFITM2Q01629 132 aa7.16□□□□□ -1.26
LINC00648-204ENST00000557749 FAM104AQ969W3 186 aa7.16□□□□□ -1.26
LINC00648-204ENST00000557749 AMELXQ99217 191 aa7.16□□□□□ -1.26
LINC00648-204ENST00000557749 IGIPA6NJ69 53 aa7.15□□□□□ -1.26
LINC00648-204ENST00000557749 ERASQ7Z444 233 aa7.15□□□□□ -1.26
LINC00648-204ENST00000557749 FAM19A3Q7Z5A8 133 aa7.15□□□□□ -1.26
LINC00648-204ENST00000557749 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
LINC00648-204ENST00000557749 GEMIN7Q9H840 131 aaKnown RBP7.15□□□□□ -1.26
LINC00648-204ENST00000557749 SMCO4Q9NRQ5 59 aa7.15□□□□□ -1.26
LINC00648-204ENST00000557749 CARHSP1Q9Y2V2 147 aaKnown RBP7.15□□□□□ -1.26
LINC00648-204ENST00000557749 CKS1BP61024 79 aa7.14□□□□□ -1.27
LINC00648-204ENST00000557749 C10orf91Q5T1B1 145 aa7.14□□□□□ -1.27
LINC00648-204ENST00000557749 REG3GQ6UW15 175 aa7.14□□□□□ -1.27
LINC00648-204ENST00000557749 SPINK6Q6UWN8 80 aa7.14□□□□□ -1.27
LINC00648-204ENST00000557749 CXCL5P42830 114 aa7.13□□□□□ -1.27
LINC00648-204ENST00000557749 C9orf116Q5BN46 136 aaPredicted RBP7.13□□□□□ -1.27
LINC00648-204ENST00000557749 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
LINC00648-204ENST00000557749 Q8IZM0 81 aa7.13□□□□□ -1.27
LINC00648-204ENST00000557749 SCGB3A1Q96QR1 104 aa7.13□□□□□ -1.27
LINC00648-204ENST00000557749 RPS10P5Q9NQ39 176 aa7.13□□□□□ -1.27
LINC00648-204ENST00000557749 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
LINC00648-204ENST00000557749 NDUFC2-KCTD14E9PQ53 114 aa7.12□□□□□ -1.27
LINC00648-204ENST00000557749 HNRNPA3P51991 378 aaKnown RBP7.12□□□□□ -1.27
LINC00648-204ENST00000557749 C6orf226Q5I0X4 101 aa7.12□□□□□ -1.27
LINC00648-204ENST00000557749 SVBPQ8N300 66 aa7.12□□□□□ -1.27
LINC00648-204ENST00000557749 SNAPINO95295 136 aa7.11□□□□□ -1.27
LINC00648-204ENST00000557749 FABP9Q0Z7S8 132 aa7.11□□□□□ -1.27
LINC00648-204ENST00000557749 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
LINC00648-204ENST00000557749 LINC00173Q6ZV60 143 aa7.11□□□□□ -1.27
LINC00648-204ENST00000557749 ALKBH7Q9BT30 221 aaPredicted RBP7.11□□□□□ -1.27
LINC00648-204ENST00000557749 C6orf48Q9UBA6 75 aa7.11□□□□□ -1.27
LINC00648-204ENST00000557749 PKHD1L1Q86WI1 4243 aa7.1□□□□□ -1.27
LINC00648-204ENST00000557749 RAB5BP61020 215 aa7.1□□□□□ -1.27
LINC00648-204ENST00000557749 KIAA0087Q14695 138 aa7.1□□□□□ -1.27
LINC00648-204ENST00000557749 UNQ6190/PRO20217Q6UXQ8 127 aa7.1□□□□□ -1.27
LINC00648-204ENST00000557749 A0A0J9YXV3 536 aa7.09□□□□□ -1.27
LINC00648-204ENST00000557749 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
LINC00648-204ENST00000557749 H3BRM9 83 aa7.09□□□□□ -1.27
LINC00648-204ENST00000557749 LINC00469Q8N7U9 141 aa7.09□□□□□ -1.27
LINC00648-204ENST00000557749 TOMM7Q9P0U1 55 aa7.09□□□□□ -1.27
LINC00648-204ENST00000557749 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
LINC00648-204ENST00000557749 F8VRH5 84 aa7.08□□□□□ -1.28
LINC00648-204ENST00000557749 PMVKQ15126 192 aa7.08□□□□□ -1.28
LINC00648-204ENST00000557749 GAGE2EQ4V326 116 aa7.08□□□□□ -1.28
LINC00648-204ENST00000557749 PDZD11Q5EBL8 140 aa7.08□□□□□ -1.28
LINC00648-204ENST00000557749 GAGE2DQ9UEU5 116 aa7.08□□□□□ -1.28
LINC00648-204ENST00000557749 TRAPPC1Q9Y5R8 145 aa7.08□□□□□ -1.28
LINC00648-204ENST00000557749 APOC3P02656 99 aa7.07□□□□□ -1.28
LINC00648-204ENST00000557749 C10orf25Q5T742 122 aa7.07□□□□□ -1.28
LINC00648-204ENST00000557749 LINC01600Q96MT4 127 aa7.07□□□□□ -1.28
LINC00648-204ENST00000557749 CDKN2A-AS1Q9UH64 79 aa7.07□□□□□ -1.28
LINC00648-204ENST00000557749 FAT3Q8TDW7 4589 aa7.06□□□□□ -1.28
LINC00648-204ENST00000557749 IGLV5-45A0A087WSX0 123 aa7.06□□□□□ -1.28
LINC00648-204ENST00000557749 C2orf82Q6UX34 121 aa7.06□□□□□ -1.28
LINC00648-204ENST00000557749 CST9LQ9H4G1 147 aa7.06□□□□□ -1.28
LINC00648-204ENST00000557749 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
LINC00648-204ENST00000557749 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
LINC00648-204ENST00000557749 M0QXV9 152 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 TRIAP1O43715 76 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 ATP5LO75964 103 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 LINC00614P0C842 121 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 UBE2BP63146 152 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 SRSF9Q13242 221 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC00648-204ENST00000557749 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
LINC00648-204ENST00000557749 C1orf137Q5JT78 98 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 ZC2HC1BQ5TFG8 222 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 SFTA2Q6UW10 78 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 FAM19A5Q7Z5A7 132 aaPredicted RBP7.05□□□□□ -1.28
LINC00648-204ENST00000557749 DIRC1Q969H9 104 aa7.05□□□□□ -1.28
LINC00648-204ENST00000557749 HBDP02042 147 aa7.04□□□□□ -1.28
LINC00648-204ENST00000557749 PHF5AQ7RTV0 110 aaKnown RBP7.04□□□□□ -1.28
LINC00648-204ENST00000557749 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
LINC00648-204ENST00000557749 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
LINC00648-204ENST00000557749 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
LINC00648-204ENST00000557749 IGLV7-43P04211 117 aa7.02□□□□□ -1.29
LINC00648-204ENST00000557749 C18orf32Q8TCD1 76 aa7.02□□□□□ -1.29
LINC00648-204ENST00000557749 TP73-AS1Q9UF72 201 aa7.02□□□□□ -1.29
LINC00648-204ENST00000557749 FAM168BA1KXE4 195 aa7.01□□□□□ -1.29
LINC00648-204ENST00000557749 NUPR1O60356 82 aa7.01□□□□□ -1.29
LINC00648-204ENST00000557749 IGLC3P0DOY3 106 aa7.01□□□□□ -1.29
LINC00648-204ENST00000557749 NDUFA6P56556 154 aa7.01□□□□□ -1.29
LINC00648-204ENST00000557749 CHCHD1Q96BP2 118 aaKnown RBP7.01□□□□□ -1.29
LINC00648-204ENST00000557749 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
LINC00648-204ENST00000557749 H0Y9J4 135 aa6.98□□□□□ -1.29
LINC00648-204ENST00000557749 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
LINC00648-204ENST00000557749 COX17Q14061 63 aa6.98□□□□□ -1.29
LINC00648-204ENST00000557749 IGLV5-39A0A0G2JS06 123 aa6.97□□□□□ -1.29
LINC00648-204ENST00000557749 MRPL55Q7Z7F7 128 aaKnown RBP6.97□□□□□ -1.29
LINC00648-204ENST00000557749 XAGE1AQ9HD64 81 aa6.97□□□□□ -1.29
LINC00648-204ENST00000557749 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
LINC00648-204ENST00000557749 IGLV1-50A0A075B6I6 118 aa6.96□□□□□ -1.3
LINC00648-204ENST00000557749 A0A096LNJ9 63 aa6.96□□□□□ -1.3
LINC00648-204ENST00000557749 RPL13AP40429 203 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms