RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.87□□□□□ -0.83
NEDD1-213ENST00000557644 COX7B2Q8TF08 81 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
NEDD1-213ENST00000557644 NDUFA1O15239 70 aa9.85□□□□□ -0.83
NEDD1-213ENST00000557644 CKS1BP61024 79 aa9.84□□□□□ -0.83
NEDD1-213ENST00000557644 ATOH7Q8N100 152 aa9.83□□□□□ -0.84
NEDD1-213ENST00000557644 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
NEDD1-213ENST00000557644 SDIM1Q6ZPB5 146 aa9.83□□□□□ -0.84
NEDD1-213ENST00000557644 C20orf202A1L168 122 aa9.82□□□□□ -0.84
NEDD1-213ENST00000557644 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
NEDD1-213ENST00000557644 STPG4Q8N801 248 aa9.82□□□□□ -0.84
NEDD1-213ENST00000557644 FAM30AQ9NZY2 134 aa9.82□□□□□ -0.84
NEDD1-213ENST00000557644 F8WDY8 70 aa9.81□□□□□ -0.84
NEDD1-213ENST00000557644 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
NEDD1-213ENST00000557644 CXCL5P42830 114 aa9.8□□□□□ -0.84
NEDD1-213ENST00000557644 DNAH8Q96JB1 4490 aa9.8□□□□□ -0.84
NEDD1-213ENST00000557644 PANO1I0J062 215 aa9.79□□□□□ -0.84
NEDD1-213ENST00000557644 APOBP04114 4563 aaKnown RBP9.79□□□□□ -0.84
NEDD1-213ENST00000557644 CHTF8P0CG12 524 aa9.79□□□□□ -0.84
NEDD1-213ENST00000557644 HERVK_113P61574 105 aa9.79□□□□□ -0.84
NEDD1-213ENST00000557644 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
NEDD1-213ENST00000557644 HAMPP81172 84 aa9.78□□□□□ -0.84
NEDD1-213ENST00000557644 RNF151Q2KHN1 245 aa9.78□□□□□ -0.84
NEDD1-213ENST00000557644 ZNF625Q96I27 306 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-213ENST00000557644 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-213ENST00000557644 LEPROTO15243 131 aa9.78□□□□□ -0.84
NEDD1-213ENST00000557644 BIRC6Q9NR09 4857 aa9.77□□□□□ -0.85
NEDD1-213ENST00000557644 A0A096LNI7 61 aa9.77□□□□□ -0.85
NEDD1-213ENST00000557644 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
NEDD1-213ENST00000557644 SCGB1D1O95968 90 aa9.77□□□□□ -0.85
NEDD1-213ENST00000557644 MAJINQ3KP22 176 aa9.77□□□□□ -0.85
NEDD1-213ENST00000557644 E9PLD3 99 aa9.77□□□□□ -0.85
NEDD1-213ENST00000557644 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
NEDD1-213ENST00000557644 Q6ZSA8 131 aa9.77□□□□□ -0.85
NEDD1-213ENST00000557644 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
NEDD1-213ENST00000557644 J3QQQ9 107 aa9.76□□□□□ -0.85
NEDD1-213ENST00000557644 Q6ZRP5 223 aa9.76□□□□□ -0.85
NEDD1-213ENST00000557644 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
NEDD1-213ENST00000557644 GAGE2BQ13066 116 aa9.75□□□□□ -0.85
NEDD1-213ENST00000557644 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
NEDD1-213ENST00000557644 ANKRD39Q53RE8 183 aa9.75□□□□□ -0.85
NEDD1-213ENST00000557644 NDUFA12Q9UI09 145 aa9.75□□□□□ -0.85
NEDD1-213ENST00000557644 KIAA1109Q2LD37 5005 aa9.75□□□□□ -0.85
NEDD1-213ENST00000557644 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
NEDD1-213ENST00000557644 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
NEDD1-213ENST00000557644 NDUFC2-KCTD14E9PQ53 114 aa9.73□□□□□ -0.85
NEDD1-213ENST00000557644 TLX1NBP0CAT3 122 aa9.73□□□□□ -0.85
NEDD1-213ENST00000557644 LGALS3P17931 250 aaKnown RBP9.73□□□□□ -0.85
NEDD1-213ENST00000557644 PTTG1IPP53801 180 aa9.73□□□□□ -0.85
NEDD1-213ENST00000557644 TTTY13Q9BZ97 58 aa9.73□□□□□ -0.85
NEDD1-213ENST00000557644 PFN2P35080 140 aa9.73□□□□□ -0.85
NEDD1-213ENST00000557644 XGP55808 180 aa9.73□□□□□ -0.85
NEDD1-213ENST00000557644 AKR1D1P51857 326 aa9.72□□□□□ -0.85
NEDD1-213ENST00000557644 SPACA4Q8TDM5 124 aa9.72□□□□□ -0.85
NEDD1-213ENST00000557644 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
NEDD1-213ENST00000557644 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
NEDD1-213ENST00000557644 SFTA2Q6UW10 78 aa9.71□□□□□ -0.85
NEDD1-213ENST00000557644 DPH3Q96FX2 82 aa9.71□□□□□ -0.85
NEDD1-213ENST00000557644 HSPG2P98160 4391 aa9.71□□□□□ -0.86
NEDD1-213ENST00000557644 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.86
NEDD1-213ENST00000557644 NMUP48645 174 aa9.71□□□□□ -0.86
NEDD1-213ENST00000557644 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.86
NEDD1-213ENST00000557644 SCXQ7RTU7 201 aa9.71□□□□□ -0.86
NEDD1-213ENST00000557644 A0A0U1RRA0 63 aa9.7□□□□□ -0.86
NEDD1-213ENST00000557644 CIRBP-AS1Q8TBR5 109 aa9.7□□□□□ -0.86
NEDD1-213ENST00000557644 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
NEDD1-213ENST00000557644 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
NEDD1-213ENST00000557644 RYR1P21817 5038 aa9.69□□□□□ -0.86
NEDD1-213ENST00000557644 A0A087WYN8 130 aa9.69□□□□□ -0.86
NEDD1-213ENST00000557644 PYY3Q5JQD4 70 aa9.69□□□□□ -0.86
NEDD1-213ENST00000557644 HERV-K104P63124 156 aa9.68□□□□□ -0.86
NEDD1-213ENST00000557644 C9orf129Q5T035 196 aaKnown RBP9.68□□□□□ -0.86
NEDD1-213ENST00000557644 CDK2AP2O75956 126 aa9.68□□□□□ -0.86
NEDD1-213ENST00000557644 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
NEDD1-213ENST00000557644 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
NEDD1-213ENST00000557644 LINC00474Q9P2X8 69 aa9.68□□□□□ -0.86
NEDD1-213ENST00000557644 FAM168BA1KXE4 195 aa9.67□□□□□ -0.86
NEDD1-213ENST00000557644 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
NEDD1-213ENST00000557644 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
NEDD1-213ENST00000557644 ZNF815PA8K554 130 aa9.67□□□□□ -0.86
NEDD1-213ENST00000557644 LINC00158P58513 81 aa9.67□□□□□ -0.86
NEDD1-213ENST00000557644 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
NEDD1-213ENST00000557644 COX17Q14061 63 aa9.66□□□□□ -0.86
NEDD1-213ENST00000557644 A0A0J9YXY3 114 aa9.65□□□□□ -0.86
NEDD1-213ENST00000557644 PLAC8Q9NZF1 115 aa9.65□□□□□ -0.87
NEDD1-213ENST00000557644 KRTAP7-1Q8IUC3 87 aa9.64□□□□□ -0.87
NEDD1-213ENST00000557644 DAND5Q8N907 189 aa9.64□□□□□ -0.87
NEDD1-213ENST00000557644 SND1-IT1Q9HBX3 110 aa9.64□□□□□ -0.87
NEDD1-213ENST00000557644 SMR3BP02814 79 aaPredicted RBP9.64□□□□□ -0.87
NEDD1-213ENST00000557644 PAM16Q9Y3D7 125 aa9.64□□□□□ -0.87
NEDD1-213ENST00000557644 FAT1Q14517 4588 aa9.64□□□□□ -0.87
NEDD1-213ENST00000557644 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
NEDD1-213ENST00000557644 TP73-AS1Q9UF72 201 aa9.63□□□□□ -0.87
NEDD1-213ENST00000557644 FAM19A5Q7Z5A7 132 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-213ENST00000557644 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
NEDD1-213ENST00000557644 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
NEDD1-213ENST00000557644 KRTAP17-1Q9BYP8 105 aa9.62□□□□□ -0.87
NEDD1-213ENST00000557644 VAMP8Q9BV40 100 aa9.61□□□□□ -0.87
NEDD1-213ENST00000557644 LINC00587B1AMM8 73 aa9.61□□□□□ -0.87
NEDD1-213ENST00000557644 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms