RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 IFI27L1Q96BM0 104 aa8.11□□□□□ -1.11
TMEM260-215ENST00000557626 TMA7Q9Y2S6 64 aaKnown RBP8.11□□□□□ -1.11
TMEM260-215ENST00000557626 LEPROTL1O95214 131 aa8.1□□□□□ -1.11
TMEM260-215ENST00000557626 MIAQ16674 131 aa8.1□□□□□ -1.11
TMEM260-215ENST00000557626 FAM19A3Q7Z5A8 133 aa8.1□□□□□ -1.11
TMEM260-215ENST00000557626 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
TMEM260-215ENST00000557626 PACRGQ96M98 296 aaPredicted RBP8.1□□□□□ -1.11
TMEM260-215ENST00000557626 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
TMEM260-215ENST00000557626 C1orf43Q9BWL3 253 aa8.1□□□□□ -1.11
TMEM260-215ENST00000557626 VCX2Q9H322 139 aa8.1□□□□□ -1.11
TMEM260-215ENST00000557626 IGLV4-69A0A075B6H9 119 aa8.09□□□□□ -1.11
TMEM260-215ENST00000557626 CCL25O15444 150 aa8.09□□□□□ -1.11
TMEM260-215ENST00000557626 FOXI1Q12951 378 aa8.09□□□□□ -1.11
TMEM260-215ENST00000557626 PMVKQ15126 192 aa8.09□□□□□ -1.11
TMEM260-215ENST00000557626 TEX43Q6ZNM6 134 aa8.09□□□□□ -1.11
TMEM260-215ENST00000557626 TRAV8-4A0A0B4J246 113 aa8.08□□□□□ -1.12
TMEM260-215ENST00000557626 IGHV3OR16-9A0A0B4J2B5 98 aa8.08□□□□□ -1.12
TMEM260-215ENST00000557626 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
TMEM260-215ENST00000557626 CRPP02741 224 aa8.08□□□□□ -1.12
TMEM260-215ENST00000557626 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
TMEM260-215ENST00000557626 S100A6P06703 90 aa8.07□□□□□ -1.12
TMEM260-215ENST00000557626 C3orf79P0CE67 100 aa8.07□□□□□ -1.12
TMEM260-215ENST00000557626 XCL1P47992 114 aa8.07□□□□□ -1.12
TMEM260-215ENST00000557626 Q6ZN92 141 aa8.07□□□□□ -1.12
TMEM260-215ENST00000557626 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
TMEM260-215ENST00000557626 HSPB8Q9UJY1 196 aa8.07□□□□□ -1.12
TMEM260-215ENST00000557626 TRAV12-1A0A0B4J245 112 aa8.06□□□□□ -1.12
TMEM260-215ENST00000557626 SS18Q15532 418 aa8.06□□□□□ -1.12
TMEM260-215ENST00000557626 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
TMEM260-215ENST00000557626 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
TMEM260-215ENST00000557626 IGLV5-45A0A087WSX0 123 aa8.05□□□□□ -1.12
TMEM260-215ENST00000557626 C11orf86A6NJI1 115 aa8.05□□□□□ -1.12
TMEM260-215ENST00000557626 SYS1-DBNDD2H3BUS1 97 aa8.05□□□□□ -1.12
TMEM260-215ENST00000557626 IGLC3P0DOY3 106 aa8.05□□□□□ -1.12
TMEM260-215ENST00000557626 MRPL35Q9NZE8 188 aaKnown RBP8.05□□□□□ -1.12
TMEM260-215ENST00000557626 LOC100996750A0A140TA64 210 aa8.04□□□□□ -1.12
TMEM260-215ENST00000557626 TINCRA0A1B0GVN0 87 aa8.04□□□□□ -1.12
TMEM260-215ENST00000557626 C5orf38Q86SI9 138 aa8.04□□□□□ -1.12
TMEM260-215ENST00000557626 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
TMEM260-215ENST00000557626 C2orf88Q9BSF0 95 aa8.04□□□□□ -1.12
TMEM260-215ENST00000557626 KRTAP4-6Q9BYQ5 205 aa8.04□□□□□ -1.12
TMEM260-215ENST00000557626 CDKN2A-AS1Q9UH64 79 aa8.04□□□□□ -1.12
TMEM260-215ENST00000557626 H0Y8G0 127 aa8.03□□□□□ -1.12
TMEM260-215ENST00000557626 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
TMEM260-215ENST00000557626 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
TMEM260-215ENST00000557626 LINC01545Q5VT33 79 aa8.03□□□□□ -1.12
TMEM260-215ENST00000557626 Q6ZRP5 223 aa8.03□□□□□ -1.12
TMEM260-215ENST00000557626 C15orf56Q8N910 161 aa8.03□□□□□ -1.12
TMEM260-215ENST00000557626 CHTOPQ9Y3Y2 248 aaKnown RBP8.03□□□□□ -1.12
TMEM260-215ENST00000557626 A0A087WZ39 114 aa8.02□□□□□ -1.13
TMEM260-215ENST00000557626 F8VRH5 84 aa8.02□□□□□ -1.13
TMEM260-215ENST00000557626 MAP1LC3CQ9BXW4 147 aa8.02□□□□□ -1.13
TMEM260-215ENST00000557626 S100A2P29034 98 aa8.01□□□□□ -1.13
TMEM260-215ENST00000557626 KRTDAPP60985 99 aa8.01□□□□□ -1.13
TMEM260-215ENST00000557626 MAJINQ3KP22 176 aa8.01□□□□□ -1.13
TMEM260-215ENST00000557626 PET117Q6UWS5 81 aa8.01□□□□□ -1.13
TMEM260-215ENST00000557626 TRAV16A0A0A6YYK6 109 aaPredicted RBP8□□□□□ -1.13
TMEM260-215ENST00000557626 COX7A2LO14548 114 aa8□□□□□ -1.13
TMEM260-215ENST00000557626 HERVK_113P63121 156 aa8□□□□□ -1.13
TMEM260-215ENST00000557626 STPG4Q8N801 248 aa8□□□□□ -1.13
TMEM260-215ENST00000557626 OR10D4PQ8NGN7 298 aa8□□□□□ -1.13
TMEM260-215ENST00000557626 SMIM1B2RUZ4 78 aa7.99□□□□□ -1.13
TMEM260-215ENST00000557626 SLPIP03973 132 aa7.99□□□□□ -1.13
TMEM260-215ENST00000557626 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
TMEM260-215ENST00000557626 LINC00469Q8N7U9 141 aa7.99□□□□□ -1.13
TMEM260-215ENST00000557626 GEMIN7Q9H840 131 aaKnown RBP7.99□□□□□ -1.13
TMEM260-215ENST00000557626 SEC11AP67812 179 aa7.98□□□□□ -1.13
TMEM260-215ENST00000557626 LINC00526Q96FQ7 95 aa7.98□□□□□ -1.13
TMEM260-215ENST00000557626 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
TMEM260-215ENST00000557626 IGKV2-24A0A0C4DH68 120 aa7.97□□□□□ -1.13
TMEM260-215ENST00000557626 IGLV5-39A0A0G2JS06 123 aa7.97□□□□□ -1.13
TMEM260-215ENST00000557626 hDV102S1A0JD36 115 aa7.97□□□□□ -1.13
TMEM260-215ENST00000557626 TMEM223A0PJW6 202 aa7.97□□□□□ -1.13
TMEM260-215ENST00000557626 DPM2O94777 84 aa7.97□□□□□ -1.13
TMEM260-215ENST00000557626 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
TMEM260-215ENST00000557626 LINC01561Q8N1V8 128 aa7.97□□□□□ -1.13
TMEM260-215ENST00000557626 IGHV1-58A0A0C4DH39 117 aa7.96□□□□□ -1.14
TMEM260-215ENST00000557626 HIGD2BQ4VC39 106 aa7.96□□□□□ -1.14
TMEM260-215ENST00000557626 CDIP1Q9H305 208 aa7.96□□□□□ -1.14
TMEM260-215ENST00000557626 IGKCP01834 107 aa7.95□□□□□ -1.14
TMEM260-215ENST00000557626 TMEM170BQ5T4T1 132 aa7.95□□□□□ -1.14
TMEM260-215ENST00000557626 MALP21145 153 aa7.94□□□□□ -1.14
TMEM260-215ENST00000557626 PLNP26678 52 aa7.94□□□□□ -1.14
TMEM260-215ENST00000557626 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
TMEM260-215ENST00000557626 ORAOV1Q8WV07 137 aa7.94□□□□□ -1.14
TMEM260-215ENST00000557626 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
TMEM260-215ENST00000557626 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
TMEM260-215ENST00000557626 C10orf25Q5T742 122 aa7.93□□□□□ -1.14
TMEM260-215ENST00000557626 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
TMEM260-215ENST00000557626 CRYGAP11844 174 aa7.92□□□□□ -1.14
TMEM260-215ENST00000557626 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
TMEM260-215ENST00000557626 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
TMEM260-215ENST00000557626 CFAP161Q6P656 301 aa7.92□□□□□ -1.14
TMEM260-215ENST00000557626 C2orf82Q6UX34 121 aa7.92□□□□□ -1.14
TMEM260-215ENST00000557626 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
TMEM260-215ENST00000557626 H3BRM9 83 aa7.91□□□□□ -1.14
TMEM260-215ENST00000557626 ANKRD39Q53RE8 183 aa7.91□□□□□ -1.14
TMEM260-215ENST00000557626 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
TMEM260-215ENST00000557626 UNQ6190/PRO20217Q6UXQ8 127 aa7.91□□□□□ -1.14
TMEM260-215ENST00000557626 Q8IZM0 81 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms