RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 CST9LQ9H4G1 147 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 OTORQ9NRC9 128 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 BET1LQ9NYM9 111 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 METTL1Q9UBP6 276 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 IGLC7A0M8Q6 106 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 FAM223BA6NKX1 122 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 GABARAPH6UMI1 98 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 K7ERJ3 54 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 CST7O76096 145 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 SAA1P0DJI8 122 aaPredicted RBP2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 MRPS10P82664 201 aaKnown RBP2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 FXYD3Q14802 87 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 ESRGQ1W209 222 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 VMA21Q3ZAQ7 101 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 SPANXN5Q5MJ07 72 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 ZNF818PQ6ZRF7 136 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 PRR15Q8IV56 129 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 FAM223AQ8IWN6 122 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 SPACA4Q8TDM5 124 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 MAFIPQ8WZ33 124 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 SLC50A1Q9BRV3 221 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 FXYD6Q9H0Q3 95 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 TMEM14BQ9NUH8 114 aa2.31□□□□□ -2.04
MTHFD1-216ENST00000557539 E7EUB6 86 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 ARPC5O15511 151 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 ETV6P41212 452 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 CATR1Q13166 79 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 RNASE10Q5GAN6 216 aaKnown RBP2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 TMEM229BQ8NBD8 167 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 SMIM4Q8WVI0 70 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 NDUFA4L2Q9NRX3 87 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 NAT8BQ9UHF3 227 aa2.3□□□□□ -2.04
MTHFD1-216ENST00000557539 OR10J4P0C629 311 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 HIST1H1BP16401 226 aaKnown RBP2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 TPPP2P59282 170 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 WT1-ASQ06250 92 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 C10orf55Q5SWW7 151 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 UNQ5815/PRO19632Q6UWF5 114 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 IDO2Q6ZQW0 420 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 LINC00299Q6ZSB3 139 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 FAM103A1Q9BTL3 118 aaKnown RBP2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 SPANXA1Q9NS26 97 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 COA4Q9NYJ1 87 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 TAS2R8Q9NYW2 309 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 V9GYH0 126 aa2.29□□□□□ -2.04
MTHFD1-216ENST00000557539 TRBV7-1A0A0A6YYK4 115 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 SMIM31A0A1B0GVY4 71 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 A8MWV9 139 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 I3L2K1 104 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 J3KT08 172 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 K7EIM0 57 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 HIST1H2BKO60814 126 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 DHFRP00374 187 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 CD3DP04234 171 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 HIST1H2BJP06899 126 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 ZNF705BP0CI00 300 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 FABP2P12104 132 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 LSM3P62310 102 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 CNBPP62633 177 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 HBBP68871 147 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 PRCDQ00LT1 54 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 ZNF846Q147U1 533 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 PLGLAQ15195 96 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 NMSQ5H8A3 153 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 LSM10Q969L4 123 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 TSC22D3Q99576 134 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 FKBP11Q9NYL4 201 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 COMMD3Q9UBI1 195 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 CACFD1Q9UGQ2 172 aa2.28□□□□□ -2.04
MTHFD1-216ENST00000557539 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 TRAV5A0A0B4J249 113 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 PIGBOS1A0A0B4J2F0 54 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 CRYM-AS1A6NIL9 109 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 C2orf70A6NJV1 201 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 PITX3O75364 302 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 TRAPPC2P0DI81 140 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 TRAPPC2BP0DI82 140 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 SLC25A6P12236 298 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 SPRR2EP22531 72 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 CBLN1P23435 193 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 SPRR2BP35325 72 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 SPRR2AP35326 72 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 CCL18P55774 89 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 ELOBQ15370 118 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 DEFB114Q30KQ6 69 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 SNX29P2Q8IUI4 249 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 RNASE11Q8TAA1 199 aaKnown RBP2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 TP53RKQ96S44 253 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 LINC00467Q9BRT7 94 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 KRTAP4-1Q9BYQ7 146 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 GSKIPQ9P0R6 139 aa2.27□□□□□ -2.05
MTHFD1-216ENST00000557539 TRAV2A0A0B4J234 112 aa2.26□□□□□ -2.05
MTHFD1-216ENST00000557539 C3orf85A0A1B0GTC6 90 aa2.26□□□□□ -2.05
MTHFD1-216ENST00000557539 CORTO00230 105 aa2.26□□□□□ -2.05
MTHFD1-216ENST00000557539 NDUFA4O00483 81 aa2.26□□□□□ -2.05
MTHFD1-216ENST00000557539 PRH1P02810 166 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms