RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 A0A087WZ39 114 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 TRAV12-1A0A0B4J245 112 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 H0Y8G0 127 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 PRSS2P07478 247 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 C3orf79P0CE67 100 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 UBE2D1P51668 147 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 KRTDAPP60985 99 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 LINC00242Q5T6M2 205 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 ZC2HC1BQ5TFG8 222 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 Q6ZRU5 148 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 STPG4Q8N801 248 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 PLAC8Q9NZF1 115 aa8.8□□□□□ -1
VPS33B-206ENST00000557358 SYS1-DBNDD2H3BUS1 97 aa8.79□□□□□ -1
VPS33B-206ENST00000557358 PANO1I0J062 215 aa8.79□□□□□ -1
VPS33B-206ENST00000557358 HERVK_113P63121 156 aa8.79□□□□□ -1
VPS33B-206ENST00000557358 GAGE2BQ13066 116 aa8.79□□□□□ -1
VPS33B-206ENST00000557358 RNF151Q2KHN1 245 aa8.79□□□□□ -1
VPS33B-206ENST00000557358 LINC01561Q8N1V8 128 aa8.79□□□□□ -1
VPS33B-206ENST00000557358 CST9LQ9H4G1 147 aa8.79□□□□□ -1
VPS33B-206ENST00000557358 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
VPS33B-206ENST00000557358 SRRM2Q9UQ35 2752 aaKnown RBP8.78□□□□□ -1
VPS33B-206ENST00000557358 A0A096LNI7 61 aa8.78□□□□□ -1
VPS33B-206ENST00000557358 RPL18AQ02543 176 aaKnown RBP8.78□□□□□ -1
VPS33B-206ENST00000557358 PET117Q6UWS5 81 aa8.78□□□□□ -1
VPS33B-206ENST00000557358 MRPL35Q9NZE8 188 aaKnown RBP8.78□□□□□ -1
VPS33B-206ENST00000557358 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1
VPS33B-206ENST00000557358 J3QL48 77 aa8.77□□□□□ -1.01
VPS33B-206ENST00000557358 PTTG1IPP53801 180 aa8.77□□□□□ -1.01
VPS33B-206ENST00000557358 CHTOPQ9Y3Y2 248 aaKnown RBP8.77□□□□□ -1.01
VPS33B-206ENST00000557358 ODF1Q14990 250 aa8.76□□□□□ -1.01
VPS33B-206ENST00000557358 C20orf202A1L168 122 aa8.75□□□□□ -1.01
VPS33B-206ENST00000557358 F8VRH5 84 aa8.75□□□□□ -1.01
VPS33B-206ENST00000557358 CKS1BP61024 79 aa8.75□□□□□ -1.01
VPS33B-206ENST00000557358 FAM19A3Q7Z5A8 133 aa8.75□□□□□ -1.01
VPS33B-206ENST00000557358 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
VPS33B-206ENST00000557358 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
VPS33B-206ENST00000557358 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
VPS33B-206ENST00000557358 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
VPS33B-206ENST00000557358 LINC01545Q5VT33 79 aa8.74□□□□□ -1.01
VPS33B-206ENST00000557358 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
VPS33B-206ENST00000557358 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
VPS33B-206ENST00000557358 LINC00469Q8N7U9 141 aa8.73□□□□□ -1.01
VPS33B-206ENST00000557358 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
VPS33B-206ENST00000557358 H3BRM9 83 aa8.72□□□□□ -1.01
VPS33B-206ENST00000557358 DPM2O94777 84 aa8.72□□□□□ -1.01
VPS33B-206ENST00000557358 PLNP26678 52 aa8.72□□□□□ -1.01
VPS33B-206ENST00000557358 AKR1D1P51857 326 aa8.72□□□□□ -1.01
VPS33B-206ENST00000557358 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
VPS33B-206ENST00000557358 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
VPS33B-206ENST00000557358 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
VPS33B-206ENST00000557358 IGKCP01834 107 aa8.71□□□□□ -1.02
VPS33B-206ENST00000557358 CXCL5P42830 114 aa8.71□□□□□ -1.02
VPS33B-206ENST00000557358 Q8IZM0 81 aa8.71□□□□□ -1.02
VPS33B-206ENST00000557358 LOC105371267A0A1B0GV96 52 aa8.7□□□□□ -1.02
VPS33B-206ENST00000557358 SCGB1D1O95968 90 aa8.7□□□□□ -1.02
VPS33B-206ENST00000557358 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
VPS33B-206ENST00000557358 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
VPS33B-206ENST00000557358 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
VPS33B-206ENST00000557358 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
VPS33B-206ENST00000557358 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
VPS33B-206ENST00000557358 OXTP01178 125 aa8.69□□□□□ -1.02
VPS33B-206ENST00000557358 ZNF22P17026 224 aaPredicted RBP8.69□□□□□ -1.02
VPS33B-206ENST00000557358 JOSD1Q15040 202 aaPredicted RBP8.69□□□□□ -1.02
VPS33B-206ENST00000557358 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
VPS33B-206ENST00000557358 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
VPS33B-206ENST00000557358 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
VPS33B-206ENST00000557358 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
VPS33B-206ENST00000557358 KRTAP10-4P60372 401 aaPredicted RBP8.68□□□□□ -1.02
VPS33B-206ENST00000557358 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
VPS33B-206ENST00000557358 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
VPS33B-206ENST00000557358 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
VPS33B-206ENST00000557358 Q6ZRP5 223 aa8.68□□□□□ -1.02
VPS33B-206ENST00000557358 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
VPS33B-206ENST00000557358 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
VPS33B-206ENST00000557358 PYY3Q5JQD4 70 aa8.66□□□□□ -1.02
VPS33B-206ENST00000557358 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
VPS33B-206ENST00000557358 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
VPS33B-206ENST00000557358 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
VPS33B-206ENST00000557358 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
VPS33B-206ENST00000557358 TMEM223A0PJW6 202 aa8.64□□□□□ -1.03
VPS33B-206ENST00000557358 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
VPS33B-206ENST00000557358 HERVK_113P61574 105 aa8.64□□□□□ -1.03
VPS33B-206ENST00000557358 FAM19A5Q7Z5A7 132 aaPredicted RBP8.63□□□□□ -1.03
VPS33B-206ENST00000557358 MYCBP2O75592 4640 aa8.62□□□□□ -1.03
VPS33B-206ENST00000557358 HSBP1L1C9JCN9 74 aa8.61□□□□□ -1.03
VPS33B-206ENST00000557358 SMIM6P0DI80 62 aa8.61□□□□□ -1.03
VPS33B-206ENST00000557358 UBE2BP63146 152 aa8.61□□□□□ -1.03
VPS33B-206ENST00000557358 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
VPS33B-206ENST00000557358 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
VPS33B-206ENST00000557358 E9PLD3 99 aa8.6□□□□□ -1.03
VPS33B-206ENST00000557358 M0QXV9 152 aa8.6□□□□□ -1.03
VPS33B-206ENST00000557358 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
VPS33B-206ENST00000557358 SFTA2Q6UW10 78 aa8.6□□□□□ -1.03
VPS33B-206ENST00000557358 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
VPS33B-206ENST00000557358 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
VPS33B-206ENST00000557358 LEPROTO15243 131 aa8.59□□□□□ -1.03
VPS33B-206ENST00000557358 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
VPS33B-206ENST00000557358 VAMP8Q9BV40 100 aa8.59□□□□□ -1.03
VPS33B-206ENST00000557358 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
VPS33B-206ENST00000557358 LBHQ53QV2 105 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms