RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 SPINT3P49223 89 aa1.12□□□□□ -2.23
PTPN21-209ENST00000557249 FXYD6P3P58550 94 aa1.12□□□□□ -2.23
PTPN21-209ENST00000557249 Q5VV11 94 aa1.12□□□□□ -2.23
PTPN21-209ENST00000557249 LINC00643Q86TS7 51 aa1.12□□□□□ -2.23
PTPN21-209ENST00000557249 TMEM14CQ9P0S9 112 aa1.12□□□□□ -2.23
PTPN21-209ENST00000557249 V9GYV3 84 aa1.12□□□□□ -2.23
PTPN21-209ENST00000557249 TNRC6CQ9HCJ0 1690 aaKnown RBP1.12□□□□□ -2.23
PTPN21-209ENST00000557249 RP1P56715 2156 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 TRAV22A0A0B4J277 110 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 IGKV3D-7A0A0C4DH55 119 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 IGKV3OR2-268A0A0C4DH90 116 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 A0A1B0GWA3 101 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 IGKV2-29A2NJV5 120 aaPredicted RBP1.11□□□□□ -2.23
PTPN21-209ENST00000557249 C10orf142B7Z368 130 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 F8WEM9 126 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 J3QRE1 110 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 ACYP1P07311 99 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 CCL3L1P16619 93 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 FCER1GP30273 86 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 EDDM3BP56851 147 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 Q6JHZ5 121 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 LINC00322Q6ZN03 302 aaPredicted RBP1.11□□□□□ -2.23
PTPN21-209ENST00000557249 Q8N6K4 173 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 FAM167A-AS1Q96KT0 104 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 NDUFA4L2Q9NRX3 87 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 PRO1854Q9UHT4 67 aa1.11□□□□□ -2.23
PTPN21-209ENST00000557249 TIMM8BQ9Y5J9 83 aaPredicted RBP1.11□□□□□ -2.23
PTPN21-209ENST00000557249 ZGRF1Q86YA3 2104 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 ARFGEF3Q5TH69 2177 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 GOLGA4Q13439 2230 aaKnown RBP1.1□□□□□ -2.23
PTPN21-209ENST00000557249 A0A087WVE0 104 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 NBDYA0A0U1RRE5 68 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 SPRR5A0A1B0GTR4 108 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 SMIM27A0A1W2PRY6 76 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 INE1O15225 51 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 NDUFC1O43677 76 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 PPP1R17O96001 155 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 IFI27P40305 119 aaPredicted RBP1.1□□□□□ -2.23
PTPN21-209ENST00000557249 FXYD4P59646 89 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 BRD3OSQ6XYD6 125 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 ZNF625Q96I27 306 aaPredicted RBP1.1□□□□□ -2.23
PTPN21-209ENST00000557249 TTTY10Q9BZA0 68 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 PSENENQ9NZ42 101 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 DOCK10Q96BY6 2186 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 CR1P17927 2039 aa1.1□□□□□ -2.23
PTPN21-209ENST00000557249 MED12Q93074 2177 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 TRGV2A0A075B6R0 118 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 IGLV3-32A0A0A0MS00 114 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 CTXND1A0A1B0GTU2 59 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 M0R2N4 97 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 HMGN4O00479 90 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 HMGN2P05204 90 aaKnown RBP1.09□□□□□ -2.23
PTPN21-209ENST00000557249 IFI6P09912 130 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 RPL38P63173 70 aaKnown RBP1.09□□□□□ -2.23
PTPN21-209ENST00000557249 KLKP1Q107X0 134 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 FXYD3Q14802 87 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 ATXN8Q156A1 80 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 VMO1Q7Z5L0 202 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 C5orf56Q8N8D9 126 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 COX7B2Q8TF08 81 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 DYNLRB1Q9NP97 96 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 LENEPQ9Y5L5 61 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 SNURFQ9Y675 71 aa1.09□□□□□ -2.23
PTPN21-209ENST00000557249 ALPK2Q86TB3 2170 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 LOC110117498A0A087WWA1 95 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 COX6CP09669 75 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 HMGA1P17096 107 aaKnown RBP1.08□□□□□ -2.24
PTPN21-209ENST00000557249 PI4KAP42356 2102 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 ELOF1P60002 83 aaKnown RBP1.08□□□□□ -2.24
PTPN21-209ENST00000557249 SERF2P84101 59 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 PLGLAQ15195 96 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 PSMG4Q5JS54 123 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 DEFB132Q7Z7B7 95 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 TMEM263Q8WUH6 116 aaKnown RBP1.08□□□□□ -2.24
PTPN21-209ENST00000557249 LINC00208Q96KT6 92 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 OBSCN-AS1Q96MR7 158 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 CDC42SE2Q9NRR3 84 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 UBE2D4Q9Y2X8 147 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 UNC13CQ8NB66 2214 aa1.08□□□□□ -2.24
PTPN21-209ENST00000557249 FREM1Q5H8C1 2179 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 A0A087WTM6 91 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 IGKV2-40A0A087WW87 121 aaPredicted RBP1.07□□□□□ -2.24
PTPN21-209ENST00000557249 TRBV30A0A0K0K1B3 111 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 BCE1O60756 84 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 IGKV2D-40P01614 121 aaPredicted RBP1.07□□□□□ -2.24
PTPN21-209ENST00000557249 IGKV4-1P06312 121 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 SMIM11AP58511 58 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 SPAG11BQ08648 103 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 FAM74A4Q5TZK3 123 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 SPAG11AQ6PDA7 123 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 FDCSPQ8NFU4 85 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 WFDC6Q9BQY6 131 aa1.07□□□□□ -2.24
PTPN21-209ENST00000557249 INTS1Q8N201 2190 aaKnown RBP1.06□□□□□ -2.24
PTPN21-209ENST00000557249 SSC5DA1L4H1 1573 aa1.06□□□□□ -2.24
PTPN21-209ENST00000557249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.06□□□□□ -2.24
PTPN21-209ENST00000557249 CPSF4LA6NMK7 179 aaKnown RBP1.06□□□□□ -2.24
PTPN21-209ENST00000557249 ZNF815PA8K554 130 aa1.06□□□□□ -2.24
PTPN21-209ENST00000557249 TMEM14DPA8MWL7 114 aa1.06□□□□□ -2.24
PTPN21-209ENST00000557249 H3BSH0 61 aa1.06□□□□□ -2.24
PTPN21-209ENST00000557249 ZNF137PP52743 207 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms