RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GNB1LQ9BYB4 327 aa6.68□□□□□ -1.34
PSEN1-220ENST00000557037 ALKBH7Q9BT30 221 aaPredicted RBP6.67□□□□□ -1.34
PSEN1-220ENST00000557037 M0R378 163 aa6.66□□□□□ -1.34
PSEN1-220ENST00000557037 TMEM191AQ9H0A3 160 aa6.66□□□□□ -1.34
PSEN1-220ENST00000557037 MED9Q9NWA0 146 aa6.66□□□□□ -1.34
PSEN1-220ENST00000557037 F8VRH5 84 aa6.65□□□□□ -1.34
PSEN1-220ENST00000557037 K7EN84 100 aa6.65□□□□□ -1.34
PSEN1-220ENST00000557037 H2AFB1P0C5Y9 115 aa6.65□□□□□ -1.34
PSEN1-220ENST00000557037 Q6Q795 121 aa6.65□□□□□ -1.34
PSEN1-220ENST00000557037 Q6ZN92 141 aa6.65□□□□□ -1.34
PSEN1-220ENST00000557037 Q8IZM0 81 aa6.65□□□□□ -1.34
PSEN1-220ENST00000557037 LINC01561Q8N1V8 128 aa6.65□□□□□ -1.34
PSEN1-220ENST00000557037 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
PSEN1-220ENST00000557037 IFITM3Q01628 133 aa6.64□□□□□ -1.35
PSEN1-220ENST00000557037 BORCS7Q96B45 105 aa6.64□□□□□ -1.35
PSEN1-220ENST00000557037 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
PSEN1-220ENST00000557037 PPP1R17O96001 155 aa6.63□□□□□ -1.35
PSEN1-220ENST00000557037 ZNF706Q9Y5V0 76 aaPredicted RBP6.63□□□□□ -1.35
PSEN1-220ENST00000557037 PPP1R2P9O14990 202 aa6.62□□□□□ -1.35
PSEN1-220ENST00000557037 GATCO43716 136 aaKnown RBP6.62□□□□□ -1.35
PSEN1-220ENST00000557037 RAB5BP61020 215 aa6.62□□□□□ -1.35
PSEN1-220ENST00000557037 MOBPQ13875 183 aa6.62□□□□□ -1.35
PSEN1-220ENST00000557037 ZC2HC1BQ5TFG8 222 aa6.62□□□□□ -1.35
PSEN1-220ENST00000557037 OCC1Q8TAD7 63 aa6.62□□□□□ -1.35
PSEN1-220ENST00000557037 IGLV4-3A0A075B6K6 122 aa6.61□□□□□ -1.35
PSEN1-220ENST00000557037 A0A1B0GUT8 65 aa6.61□□□□□ -1.35
PSEN1-220ENST00000557037 A8MWL6 223 aa6.61□□□□□ -1.35
PSEN1-220ENST00000557037 GIPP09681 153 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-220ENST00000557037 KRTAP20-1Q3LI63 56 aa6.61□□□□□ -1.35
PSEN1-220ENST00000557037 IGLV9-49A0A0B4J1Y8 123 aa6.6□□□□□ -1.35
PSEN1-220ENST00000557037 UMAD1C9J7I0 102 aa6.6□□□□□ -1.35
PSEN1-220ENST00000557037 TCAPO15273 167 aa6.6□□□□□ -1.35
PSEN1-220ENST00000557037 PDE6DO43924 150 aa6.59□□□□□ -1.35
PSEN1-220ENST00000557037 IFI27P40305 119 aaPredicted RBP6.59□□□□□ -1.35
PSEN1-220ENST00000557037 TMEM141Q96I45 108 aa6.59□□□□□ -1.35
PSEN1-220ENST00000557037 LINC00846Q9NV44 126 aa6.59□□□□□ -1.35
PSEN1-220ENST00000557037 MRPL51Q4U2R6 128 aaKnown RBP6.58□□□□□ -1.36
PSEN1-220ENST00000557037 TEX43Q6ZNM6 134 aa6.58□□□□□ -1.36
PSEN1-220ENST00000557037 C20orf78Q9BR46 151 aa6.58□□□□□ -1.36
PSEN1-220ENST00000557037 HIGD1CA8MV81 97 aa6.57□□□□□ -1.36
PSEN1-220ENST00000557037 ARPC5O15511 151 aa6.57□□□□□ -1.36
PSEN1-220ENST00000557037 MT2AP02795 61 aa6.57□□□□□ -1.36
PSEN1-220ENST00000557037 LINC01551Q86U37 167 aa6.57□□□□□ -1.36
PSEN1-220ENST00000557037 SMIM2Q9BVW6 85 aa6.57□□□□□ -1.36
PSEN1-220ENST00000557037 EIF5A2Q9GZV4 153 aaKnown RBP6.57□□□□□ -1.36
PSEN1-220ENST00000557037 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
PSEN1-220ENST00000557037 VPREB1P12018 145 aa6.56□□□□□ -1.36
PSEN1-220ENST00000557037 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
PSEN1-220ENST00000557037 FAM231DQ6ZW35 169 aa6.56□□□□□ -1.36
PSEN1-220ENST00000557037 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
PSEN1-220ENST00000557037 CXCL5P42830 114 aa6.55□□□□□ -1.36
PSEN1-220ENST00000557037 SSBP3-AS1Q7Z2R9 100 aa6.55□□□□□ -1.36
PSEN1-220ENST00000557037 SMCR5Q8TEV8 140 aa6.55□□□□□ -1.36
PSEN1-220ENST00000557037 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
PSEN1-220ENST00000557037 PYGO1Q9Y3Y4 419 aa6.55□□□□□ -1.36
PSEN1-220ENST00000557037 S100ZQ8WXG8 99 aa6.54□□□□□ -1.36
PSEN1-220ENST00000557037 ANAPC16Q96DE5 110 aa6.54□□□□□ -1.36
PSEN1-220ENST00000557037 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
PSEN1-220ENST00000557037 TRBV24-1A0A075B6N3 115 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 CKS2P33552 79 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 RIGQ13278 110 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 AKAP14Q86UN6 197 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
PSEN1-220ENST00000557037 MT1FP04733 61 aa6.52□□□□□ -1.37
PSEN1-220ENST00000557037 RAB14P61106 215 aa6.52□□□□□ -1.37
PSEN1-220ENST00000557037 CT83Q5H943 113 aa6.52□□□□□ -1.37
PSEN1-220ENST00000557037 FAM104BQ5XKR9 115 aa6.52□□□□□ -1.37
PSEN1-220ENST00000557037 Q8NDZ9 215 aa6.52□□□□□ -1.37
PSEN1-220ENST00000557037 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
PSEN1-220ENST00000557037 NPSP0C0P6 89 aa6.51□□□□□ -1.37
PSEN1-220ENST00000557037 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
PSEN1-220ENST00000557037 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
PSEN1-220ENST00000557037 VCX2Q9H322 139 aa6.51□□□□□ -1.37
PSEN1-220ENST00000557037 NPYP01303 97 aa6.5□□□□□ -1.37
PSEN1-220ENST00000557037 PFN2P35080 140 aa6.5□□□□□ -1.37
PSEN1-220ENST00000557037 C2orf66Q6UXQ4 117 aa6.5□□□□□ -1.37
PSEN1-220ENST00000557037 AMELXQ99217 191 aa6.5□□□□□ -1.37
PSEN1-220ENST00000557037 LINC00862A6NCI5 91 aa6.49□□□□□ -1.37
PSEN1-220ENST00000557037 RAB5AP20339 215 aa6.49□□□□□ -1.37
PSEN1-220ENST00000557037 RPL24P83731 157 aaKnown RBP6.49□□□□□ -1.37
PSEN1-220ENST00000557037 SMIM1B2RUZ4 78 aa6.48□□□□□ -1.37
PSEN1-220ENST00000557037 D6R8Y8 96 aa6.48□□□□□ -1.37
PSEN1-220ENST00000557037 HERVK_113P63121 156 aa6.48□□□□□ -1.37
PSEN1-220ENST00000557037 SND1-IT1Q9HBX3 110 aa6.48□□□□□ -1.37
PSEN1-220ENST00000557037 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
PSEN1-220ENST00000557037 C9orf153Q5TBE3 101 aa6.47□□□□□ -1.37
PSEN1-220ENST00000557037 FAM19A3Q7Z5A8 133 aa6.47□□□□□ -1.37
PSEN1-220ENST00000557037 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
PSEN1-220ENST00000557037 SMLR1H3BR10 107 aa6.46□□□□□ -1.38
PSEN1-220ENST00000557037 TEX46H3BTG2 121 aa6.46□□□□□ -1.38
PSEN1-220ENST00000557037 LINC00299Q6ZSB3 139 aa6.46□□□□□ -1.38
PSEN1-220ENST00000557037 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
PSEN1-220ENST00000557037 HRCT1Q6UXD1 115 aa6.45□□□□□ -1.38
PSEN1-220ENST00000557037 ERC2-IT1O76042 136 aa6.44□□□□□ -1.38
PSEN1-220ENST00000557037 ATP5LO75964 103 aa6.43□□□□□ -1.38
PSEN1-220ENST00000557037 SPINK8P0C7L1 97 aa6.43□□□□□ -1.38
PSEN1-220ENST00000557037 SEC11AP67812 179 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms