RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 LINC01549A6NIU2 74 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 F8VRH5 84 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 SPINK8P0C7L1 97 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 ZNF22P17026 224 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-244ENST00000556898 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-244ENST00000556898 PKIAP61925 76 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 SMAGPQ0VAQ4 97 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 WFDC2Q14508 124 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 JOSD1Q15040 202 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-244ENST00000556898 SS18Q15532 418 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 STPG4Q8N801 248 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 C2orf88Q9BSF0 95 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 CDKN2A-AS1Q9UH64 79 aa3.51□□□□□ -1.85
ATXN3-244ENST00000556898 TRAV8-3A0A0A6YYJ7 113 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 TINCRA0A1B0GVN0 87 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 LECT2O14960 151 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 DPM2O94777 84 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 IGKCP01834 107 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 MIAQ16674 131 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 PAPPA-AS1Q5QFB9 102 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 Q6ZR54 194 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 FAM19A3Q7Z5A8 133 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 NFE4Q86UQ8 179 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 LINC00469Q8N7U9 141 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 LINC00526Q96FQ7 95 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 TP73-AS1Q9UF72 201 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 HERC1Q15751 4861 aa3.5□□□□□ -1.85
ATXN3-244ENST00000556898 HSPG2P98160 4391 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 IGLV5-45A0A087WSX0 123 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 TRAV9-2A0A087WT02 112 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 IGKV2D-26A0A0A0MRZ7 120 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 IGHV3OR16-9A0A0B4J2B5 98 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 C20orf202A1L168 122 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 C16orf90A8MZG2 172 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 FUSP35637 526 aaKnown RBP eCLIP3.49□□□□□ -1.85
ATXN3-244ENST00000556898 PCP4P48539 62 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 TSPEAR-AS2P59090 65 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 HERVK_113P63121 156 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 CD164L2Q6UWJ8 174 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-244ENST00000556898 C10orf126Q8N4M7 172 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 MPLKIPQ8TAP9 179 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 TTTY13Q9BZ97 58 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 GEMIN7Q9H840 131 aaKnown RBP3.49□□□□□ -1.85
ATXN3-244ENST00000556898 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
ATXN3-244ENST00000556898 TRAV8-4A0A0B4J246 113 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 SMIM1B2RUZ4 78 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 HIGD2BQ4VC39 106 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 TTC32Q5I0X7 151 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 C1orf134Q5TEV5 83 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 C6orf223Q8N319 242 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
ATXN3-244ENST00000556898 A0A087WZ39 114 aa3.47□□□□□ -1.85
ATXN3-244ENST00000556898 USP17L23D6RBM5 183 aa3.47□□□□□ -1.85
ATXN3-244ENST00000556898 COX7A2LO14548 114 aa3.47□□□□□ -1.85
ATXN3-244ENST00000556898 PLNP26678 52 aa3.47□□□□□ -1.85
ATXN3-244ENST00000556898 ORAOV1Q8WV07 137 aa3.47□□□□□ -1.85
ATXN3-244ENST00000556898 TOMM7Q9P0U1 55 aa3.47□□□□□ -1.85
ATXN3-244ENST00000556898 PAM16Q9Y3D7 125 aa3.47□□□□□ -1.85
ATXN3-244ENST00000556898 DNAH5Q8TE73 4624 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 IGHV1-58A0A0C4DH39 117 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 IGLV5-39A0A0G2JS06 123 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 LRCOL1A6NCL2 159 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 H3BRM9 83 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 PSCAO43653 123 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 INAFM2P0DMQ5 153 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 NMUP48645 174 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 SEC11AP67812 179 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 KIAA0087Q14695 138 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 SPATA45Q537H7 98 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 C2orf82Q6UX34 121 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 PCP2Q8IVA1 136 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 PLEKHB2Q96CS7 222 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 RMI2Q96E14 147 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 PRO1933Q9H354 126 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 PKD1P98161 4303 aa3.46□□□□□ -1.86
ATXN3-244ENST00000556898 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-244ENST00000556898 A0A087WTM6 91 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 EPM2AB3EWF7 344 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 E9PLD3 99 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 K7EP13 123 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 LEPROTO15243 131 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 SPAG11BQ08648 103 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 UNQ6190/PRO20217Q6UXQ8 127 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 LINC00518Q8N0U6 118 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 ZNF625Q96I27 306 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-244ENST00000556898 C14orf144Q96I85 54 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 C12orf57Q99622 126 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 VAMP8Q9BV40 100 aa3.45□□□□□ -1.86
ATXN3-244ENST00000556898 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
ATXN3-244ENST00000556898 J3QQQ9 107 aa3.44□□□□□ -1.86
ATXN3-244ENST00000556898 SMIM6P0DI80 62 aa3.44□□□□□ -1.86
ATXN3-244ENST00000556898 HERVK_113P61574 105 aa3.44□□□□□ -1.86
ATXN3-244ENST00000556898 LINC01620Q4KN68 170 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms