RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 UBE2D1P51668 147 aa5.42□□□□□ -1.54
HNRNPC-227ENST00000556897 RNASE13Q5GAN3 156 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-227ENST00000556897 C5orf38Q86SI9 138 aa5.42□□□□□ -1.54
HNRNPC-227ENST00000556897 C2orf48Q96LS8 159 aa5.42□□□□□ -1.54
HNRNPC-227ENST00000556897 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
HNRNPC-227ENST00000556897 K7EN84 100 aa5.41□□□□□ -1.54
HNRNPC-227ENST00000556897 SPAG11BQ08648 103 aa5.41□□□□□ -1.54
HNRNPC-227ENST00000556897 PDZD11Q5EBL8 140 aa5.41□□□□□ -1.54
HNRNPC-227ENST00000556897 TRBV27A0A0K0K1C4 114 aa5.4□□□□□ -1.54
HNRNPC-227ENST00000556897 K7ERU9 68 aa5.4□□□□□ -1.54
HNRNPC-227ENST00000556897 POLR2KP53803 58 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-227ENST00000556897 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-227ENST00000556897 OCC1Q8TAD7 63 aa5.4□□□□□ -1.54
HNRNPC-227ENST00000556897 TSKUQ8WUA8 353 aa5.4□□□□□ -1.54
HNRNPC-227ENST00000556897 ZNF727A8MUV8 499 aa5.39□□□□□ -1.55
HNRNPC-227ENST00000556897 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
HNRNPC-227ENST00000556897 RPL13AP40429 203 aaKnown RBP5.39□□□□□ -1.55
HNRNPC-227ENST00000556897 MRPL35Q9NZE8 188 aaKnown RBP5.39□□□□□ -1.55
HNRNPC-227ENST00000556897 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
HNRNPC-227ENST00000556897 UBE2D4Q9Y2X8 147 aa5.39□□□□□ -1.55
HNRNPC-227ENST00000556897 CSDC2Q9Y534 153 aaKnown RBP5.39□□□□□ -1.55
HNRNPC-227ENST00000556897 TSPAN13O95857 204 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 FCER1GP30273 86 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 OCIAD2Q56VL3 154 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 C10orf25Q5T742 122 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 KRTAP7-1Q8IUC3 87 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 VPS25Q9BRG1 176 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 VAMP8Q9BV40 100 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
HNRNPC-227ENST00000556897 A8MWL6 223 aa5.37□□□□□ -1.55
HNRNPC-227ENST00000556897 VCYO14598 125 aa5.37□□□□□ -1.55
HNRNPC-227ENST00000556897 UBE2BP63146 152 aa5.37□□□□□ -1.55
HNRNPC-227ENST00000556897 Q6ZUT4 128 aa5.37□□□□□ -1.55
HNRNPC-227ENST00000556897 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
HNRNPC-227ENST00000556897 TRAV9-1A0A075B6T8 112 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 SMKR1H3BMG3 65 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 M0QXV9 152 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 NDUFA1O15239 70 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 TLX1NBP0CAT3 122 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 SMAGPQ0VAQ4 97 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 UNQ6190/PRO20217Q6UXQ8 127 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 BORCS7Q96B45 105 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 TMEM191AQ9H0A3 160 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 NAT8Q9UHE5 227 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 LAMTOR2Q9Y2Q5 125 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
HNRNPC-227ENST00000556897 IGHV3OR16-9A0A0B4J2B5 98 aa5.35□□□□□ -1.55
HNRNPC-227ENST00000556897 A0A1B0GUT8 65 aa5.35□□□□□ -1.55
HNRNPC-227ENST00000556897 SUMO2P61956 95 aaKnown RBP5.35□□□□□ -1.55
HNRNPC-227ENST00000556897 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
HNRNPC-227ENST00000556897 CST9LQ9H4G1 147 aa5.35□□□□□ -1.55
HNRNPC-227ENST00000556897 HIGD1CA8MV81 97 aa5.34□□□□□ -1.55
HNRNPC-227ENST00000556897 F8WDY8 70 aa5.34□□□□□ -1.55
HNRNPC-227ENST00000556897 TMEM250H0YL14 139 aa5.34□□□□□ -1.55
HNRNPC-227ENST00000556897 TRIAP1O43715 76 aa5.34□□□□□ -1.55
HNRNPC-227ENST00000556897 FAM231DQ6ZW35 169 aa5.34□□□□□ -1.55
HNRNPC-227ENST00000556897 NRACQ8N912 160 aa5.34□□□□□ -1.55
HNRNPC-227ENST00000556897 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
HNRNPC-227ENST00000556897 A0A1B0GV72 72 aa5.33□□□□□ -1.56
HNRNPC-227ENST00000556897 ZNF861PO60384 105 aa5.33□□□□□ -1.56
HNRNPC-227ENST00000556897 IGLC3P0DOY3 106 aa5.33□□□□□ -1.56
HNRNPC-227ENST00000556897 MTURNQ8N3F0 131 aa5.33□□□□□ -1.56
HNRNPC-227ENST00000556897 FAM104AQ969W3 186 aa5.33□□□□□ -1.56
HNRNPC-227ENST00000556897 PPP1R17O96001 155 aa5.32□□□□□ -1.56
HNRNPC-227ENST00000556897 RPL39P62891 51 aaKnown RBP5.32□□□□□ -1.56
HNRNPC-227ENST00000556897 BATFQ16520 125 aa5.32□□□□□ -1.56
HNRNPC-227ENST00000556897 COX19Q49B96 90 aa5.32□□□□□ -1.56
HNRNPC-227ENST00000556897 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
HNRNPC-227ENST00000556897 A0A087X002 238 aa5.31□□□□□ -1.56
HNRNPC-227ENST00000556897 NDUFC2-KCTD14E9PQ53 114 aa5.31□□□□□ -1.56
HNRNPC-227ENST00000556897 KIAA0087Q14695 138 aa5.31□□□□□ -1.56
HNRNPC-227ENST00000556897 PMCHL1Q16048 86 aa5.31□□□□□ -1.56
HNRNPC-227ENST00000556897 C2orf82Q6UX34 121 aa5.31□□□□□ -1.56
HNRNPC-227ENST00000556897 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 HBBP68871 147 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 VAMP3Q15836 100 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 Q6ZN92 141 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 RETNLBQ9BQ08 111 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 SPANXA1Q9NS26 97 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 PAM16Q9Y3D7 125 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 TRAPPC1Q9Y5R8 145 aa5.3□□□□□ -1.56
HNRNPC-227ENST00000556897 CRYGAP11844 174 aa5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 RPL23P62829 140 aaKnown RBP5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 RIGQ13278 110 aa5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 MRPL51Q4U2R6 128 aaKnown RBP5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 SPATA45Q537H7 98 aa5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 TYMSOSQ8TAI1 123 aa5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 SMIM7Q9BQ49 75 aa5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 C20orf78Q9BR46 151 aa5.29□□□□□ -1.56
HNRNPC-227ENST00000556897 FAM104BQ5XKR9 115 aa5.28□□□□□ -1.56
HNRNPC-227ENST00000556897 MRPL54Q6P161 138 aaKnown RBP5.28□□□□□ -1.56
HNRNPC-227ENST00000556897 C22orf24Q9Y442 160 aa5.28□□□□□ -1.56
HNRNPC-227ENST00000556897 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
HNRNPC-227ENST00000556897 NUPR1O60356 82 aa5.27□□□□□ -1.57
HNRNPC-227ENST00000556897 ADIRFQ15847 76 aa5.27□□□□□ -1.57
HNRNPC-227ENST00000556897 LINC00242Q5T6M2 205 aa5.27□□□□□ -1.57
HNRNPC-227ENST00000556897 SMIM2Q9BVW6 85 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms