RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 CST9LQ9H4G1 147 aa7.22□□□□□ -1.25
SLIRP-206ENST00000556375 J3QL48 77 aa7.21□□□□□ -1.26
SLIRP-206ENST00000556375 RAB5BP61020 215 aa7.21□□□□□ -1.26
SLIRP-206ENST00000556375 PRR3P79522 188 aaKnown RBP7.21□□□□□ -1.26
SLIRP-206ENST00000556375 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-206ENST00000556375 C2orf82Q6UX34 121 aa7.21□□□□□ -1.26
SLIRP-206ENST00000556375 Q6ZRP5 223 aa7.21□□□□□ -1.26
SLIRP-206ENST00000556375 TOMM7Q9P0U1 55 aa7.21□□□□□ -1.26
SLIRP-206ENST00000556375 A0A1W2PNN7 141 aa7.2□□□□□ -1.26
SLIRP-206ENST00000556375 SMIM1B2RUZ4 78 aa7.2□□□□□ -1.26
SLIRP-206ENST00000556375 CKS1BP61024 79 aa7.2□□□□□ -1.26
SLIRP-206ENST00000556375 SLC7A5P1Q8MH63 180 aa7.2□□□□□ -1.26
SLIRP-206ENST00000556375 NDUFC2-KCTD14E9PQ53 114 aa7.19□□□□□ -1.26
SLIRP-206ENST00000556375 OXTP01178 125 aa7.19□□□□□ -1.26
SLIRP-206ENST00000556375 CXCL5P42830 114 aa7.19□□□□□ -1.26
SLIRP-206ENST00000556375 PMCHL1Q16048 86 aa7.19□□□□□ -1.26
SLIRP-206ENST00000556375 PDZD11Q5EBL8 140 aa7.19□□□□□ -1.26
SLIRP-206ENST00000556375 C6orf226Q5I0X4 101 aa7.19□□□□□ -1.26
SLIRP-206ENST00000556375 ATP5LO75964 103 aa7.18□□□□□ -1.26
SLIRP-206ENST00000556375 F8VRH5 84 aa7.17□□□□□ -1.26
SLIRP-206ENST00000556375 IGLC3P0DOY3 106 aa7.17□□□□□ -1.26
SLIRP-206ENST00000556375 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
SLIRP-206ENST00000556375 CHCHD1Q96BP2 118 aaKnown RBP7.17□□□□□ -1.26
SLIRP-206ENST00000556375 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
SLIRP-206ENST00000556375 H3BRM9 83 aa7.16□□□□□ -1.26
SLIRP-206ENST00000556375 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
SLIRP-206ENST00000556375 COX7B2Q8TF08 81 aa7.16□□□□□ -1.26
SLIRP-206ENST00000556375 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
SLIRP-206ENST00000556375 NDUFA6P56556 154 aa7.15□□□□□ -1.26
SLIRP-206ENST00000556375 FAM19A5Q7Z5A7 132 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-206ENST00000556375 TRGC2P03986 189 aa7.14□□□□□ -1.27
SLIRP-206ENST00000556375 ZNF22P17026 224 aaPredicted RBP7.14□□□□□ -1.27
SLIRP-206ENST00000556375 C9orf129Q5T035 196 aaKnown RBP7.14□□□□□ -1.27
SLIRP-206ENST00000556375 PHF5AQ7RTV0 110 aaKnown RBP7.14□□□□□ -1.27
SLIRP-206ENST00000556375 IGLV5-39A0A0G2JS06 123 aa7.13□□□□□ -1.27
SLIRP-206ENST00000556375 M0QXV9 152 aa7.13□□□□□ -1.27
SLIRP-206ENST00000556375 BAGE3Q86Y29 109 aa7.13□□□□□ -1.27
SLIRP-206ENST00000556375 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
SLIRP-206ENST00000556375 C11orf86A6NJI1 115 aa7.12□□□□□ -1.27
SLIRP-206ENST00000556375 HSBP1O75506 76 aa7.12□□□□□ -1.27
SLIRP-206ENST00000556375 KRTAP7-1Q8IUC3 87 aa7.12□□□□□ -1.27
SLIRP-206ENST00000556375 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
SLIRP-206ENST00000556375 TRAV12-1A0A0B4J245 112 aa7.11□□□□□ -1.27
SLIRP-206ENST00000556375 COLCA2A8K830 154 aa7.11□□□□□ -1.27
SLIRP-206ENST00000556375 SPINK6Q6UWN8 80 aa7.11□□□□□ -1.27
SLIRP-206ENST00000556375 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
SLIRP-206ENST00000556375 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
SLIRP-206ENST00000556375 SERF1AO75920 110 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 MT1HL1P0DM35 61 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 LINC00310P59036 64 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
SLIRP-206ENST00000556375 ODF1Q14990 250 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 C1orf137Q5JT78 98 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 SERTAD4-AS1Q5TG53 156 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 FAM19A2Q8N3H0 131 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 TNXBP22105 4242 aa7.09□□□□□ -1.27
SLIRP-206ENST00000556375 UBE2BP63146 152 aa7.08□□□□□ -1.28
SLIRP-206ENST00000556375 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
SLIRP-206ENST00000556375 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
SLIRP-206ENST00000556375 KRTAP11-1Q8IUC1 163 aa7.08□□□□□ -1.28
SLIRP-206ENST00000556375 TP73-AS1Q9UF72 201 aa7.07□□□□□ -1.28
SLIRP-206ENST00000556375 LEPROTL1O95214 131 aa7.06□□□□□ -1.28
SLIRP-206ENST00000556375 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
SLIRP-206ENST00000556375 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
SLIRP-206ENST00000556375 PLA2G2DQ9UNK4 145 aa7.06□□□□□ -1.28
SLIRP-206ENST00000556375 C22orf24Q9Y442 160 aa7.06□□□□□ -1.28
SLIRP-206ENST00000556375 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
SLIRP-206ENST00000556375 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
SLIRP-206ENST00000556375 SCO1O75880 301 aa7.05□□□□□ -1.28
SLIRP-206ENST00000556375 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-206ENST00000556375 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-206ENST00000556375 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
SLIRP-206ENST00000556375 PFN2P35080 140 aa7.04□□□□□ -1.28
SLIRP-206ENST00000556375 COX17Q14061 63 aa7.04□□□□□ -1.28
SLIRP-206ENST00000556375 MRPL55Q7Z7F7 128 aaKnown RBP7.04□□□□□ -1.28
SLIRP-206ENST00000556375 HSPB8Q9UJY1 196 aa7.04□□□□□ -1.28
SLIRP-206ENST00000556375 IGLV5-37A0A075B6J1 123 aa7.03□□□□□ -1.28
SLIRP-206ENST00000556375 H0Y8G0 127 aa7.03□□□□□ -1.28
SLIRP-206ENST00000556375 NUPR1O60356 82 aa7.03□□□□□ -1.28
SLIRP-206ENST00000556375 DIRC1Q969H9 104 aa7.03□□□□□ -1.28
SLIRP-206ENST00000556375 H0Y9J4 135 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 FABP4P15090 132 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 PLNP26678 52 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-206ENST00000556375 NKAPP1Q8N9T2 125 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 SND1-IT1Q9HBX3 110 aa7.01□□□□□ -1.29
SLIRP-206ENST00000556375 LINC00167Q96N53 147 aa7□□□□□ -1.29
SLIRP-206ENST00000556375 DPM2O94777 84 aa6.99□□□□□ -1.29
SLIRP-206ENST00000556375 VPREB1P12018 145 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms