RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 C5orf38Q86SI9 138 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 KRTAP7-1Q8IUC3 87 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 LINC00526Q96FQ7 95 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 RYR2Q92736 4967 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
ATXN3-238ENST00000556288 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.93
ATXN3-238ENST00000556288 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-238ENST00000556288 CDK2AP2O75956 126 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 LINC00614P0C842 121 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 G0S2P27469 103 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 ORMDL2Q53FV1 153 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 PDZD11Q5EBL8 140 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 Q6ZN92 141 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 Q6ZUT4 128 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 MIEN1Q9BRT3 115 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 VCX2Q9H322 139 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 NXT2Q9NPJ8 142 aaKnown RBP3.02□□□□□ -1.93
ATXN3-238ENST00000556288 CYSLTR1Q9Y271 337 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 LAMTOR2Q9Y2Q5 125 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 DNAH6Q9C0G6 4158 aa3.02□□□□□ -1.93
ATXN3-238ENST00000556288 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 COX7A2LO14548 114 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 APOMO95445 188 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 RPL32P62910 135 aaKnown RBP3.01□□□□□ -1.93
ATXN3-238ENST00000556288 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 CD164L2Q6UWJ8 174 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 C2orf66Q6UXQ4 117 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 TMEM141Q96I45 108 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 ALKBH7Q9BT30 221 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-238ENST00000556288 VAMP8Q9BV40 100 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 TIMM21Q9BVV7 248 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 SPANXA1Q9NS26 97 aa3.01□□□□□ -1.93
ATXN3-238ENST00000556288 IGLV7-46A0A075B6I9 117 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 IGHV1-58A0A0C4DH39 117 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 IGKV2-24A0A0C4DH68 120 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 A0A1B0GV90 55 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 EPM2AB3EWF7 344 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 XGP55808 180 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 CHCHD1Q96BP2 118 aaKnown RBP3□□□□□ -1.93
ATXN3-238ENST00000556288 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
ATXN3-238ENST00000556288 TOMM7Q9P0U1 55 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 UQCR10Q9UDW1 63 aa3□□□□□ -1.93
ATXN3-238ENST00000556288 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
ATXN3-238ENST00000556288 IGLV4-69A0A075B6H9 119 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 IGLV4-3A0A075B6K6 122 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 A0A0J9YXV3 536 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 SERF1AO75920 110 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 MRPS36P82909 103 aaKnown RBP2.99□□□□□ -1.93
ATXN3-238ENST00000556288 COX6A2Q02221 97 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 MAJINQ3KP22 176 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 PET117Q6UWS5 81 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 C15orf56Q8N910 161 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 C9orf163Q8N9P6 203 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 SNHG12Q9BXW3 62 aa2.99□□□□□ -1.93
ATXN3-238ENST00000556288 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 H0Y8G0 127 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-238ENST00000556288 K7EMI3 77 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 DLEU1O43261 78 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 CHTF8P0CG12 524 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 SPAG11BQ08648 103 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 C6orf226Q5I0X4 101 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 ERASQ7Z444 233 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 C18orf32Q8TCD1 76 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 CARD19Q96LW7 228 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 CBY1Q9Y3M2 126 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 PKD1P98161 4303 aa2.98□□□□□ -1.93
ATXN3-238ENST00000556288 GVQW2A0A096LPI5 108 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-238ENST00000556288 IGIPA6NJ69 53 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 NUPR1O60356 82 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 HSBP1O75506 76 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 INAFM2P0DMQ5 153 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 CKS1BP61024 79 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 RPL18AQ02543 176 aaKnown RBP2.97□□□□□ -1.93
ATXN3-238ENST00000556288 PMVKQ15126 192 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 LINC00242Q5T6M2 205 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 Q5VSD8 79 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 SDIM1Q6ZPB5 146 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 Q6ZRP5 223 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 Q6ZRU5 148 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 SCXQ7RTU7 201 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 FAM19A2Q8N3H0 131 aa2.97□□□□□ -1.93
ATXN3-238ENST00000556288 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 308.2 ms