RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
ACTN1-217ENST00000556203 Q6ZRP5 223 aa9.53□□□□□ -0.88
ACTN1-217ENST00000556203 CHCHD1Q96BP2 118 aaKnown RBP9.53□□□□□ -0.88
ACTN1-217ENST00000556203 FLG2Q5D862 2391 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-217ENST00000556203 A0A1W2PNN7 141 aa9.52□□□□□ -0.89
ACTN1-217ENST00000556203 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
ACTN1-217ENST00000556203 ATP5LO75964 103 aa9.52□□□□□ -0.89
ACTN1-217ENST00000556203 HNRNPA3P51991 378 aaKnown RBP9.52□□□□□ -0.89
ACTN1-217ENST00000556203 C9orf116Q5BN46 136 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-217ENST00000556203 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
ACTN1-217ENST00000556203 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
ACTN1-217ENST00000556203 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
ACTN1-217ENST00000556203 COLCA2A8K830 154 aa9.5□□□□□ -0.89
ACTN1-217ENST00000556203 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
ACTN1-217ENST00000556203 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
ACTN1-217ENST00000556203 BAGE3Q86Y29 109 aa9.5□□□□□ -0.89
ACTN1-217ENST00000556203 MYCBP2O75592 4640 aa9.5□□□□□ -0.89
ACTN1-217ENST00000556203 H3BRM9 83 aa9.49□□□□□ -0.89
ACTN1-217ENST00000556203 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
ACTN1-217ENST00000556203 CXCL5P42830 114 aa9.48□□□□□ -0.89
ACTN1-217ENST00000556203 PRR3P79522 188 aaKnown RBP9.48□□□□□ -0.89
ACTN1-217ENST00000556203 COX7B2Q8TF08 81 aa9.48□□□□□ -0.89
ACTN1-217ENST00000556203 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
ACTN1-217ENST00000556203 F8VRH5 84 aa9.47□□□□□ -0.89
ACTN1-217ENST00000556203 HSBP1O75506 76 aa9.47□□□□□ -0.89
ACTN1-217ENST00000556203 ZNF22P17026 224 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-217ENST00000556203 J3QL48 77 aa9.46□□□□□ -0.9
ACTN1-217ENST00000556203 SCO1O75880 301 aa9.46□□□□□ -0.9
ACTN1-217ENST00000556203 FAM19A2Q8N3H0 131 aa9.46□□□□□ -0.9
ACTN1-217ENST00000556203 IFI27L1Q96BM0 104 aa9.46□□□□□ -0.9
ACTN1-217ENST00000556203 KRTAP29-1A8MX34 341 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-217ENST00000556203 PHF5AQ7RTV0 110 aaKnown RBP9.45□□□□□ -0.9
ACTN1-217ENST00000556203 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-217ENST00000556203 C11orf86A6NJI1 115 aa9.44□□□□□ -0.9
ACTN1-217ENST00000556203 SERF1AO75920 110 aa9.44□□□□□ -0.9
ACTN1-217ENST00000556203 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
ACTN1-217ENST00000556203 CHTOPQ9Y3Y2 248 aaKnown RBP9.44□□□□□ -0.9
ACTN1-217ENST00000556203 LINC00310P59036 64 aa9.43□□□□□ -0.9
ACTN1-217ENST00000556203 TMEM170BQ5T4T1 132 aa9.43□□□□□ -0.9
ACTN1-217ENST00000556203 TRAV12-1A0A0B4J245 112 aa9.42□□□□□ -0.9
ACTN1-217ENST00000556203 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
ACTN1-217ENST00000556203 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
ACTN1-217ENST00000556203 OXTP01178 125 aa9.41□□□□□ -0.9
ACTN1-217ENST00000556203 XAGE1AQ9HD64 81 aa9.41□□□□□ -0.9
ACTN1-217ENST00000556203 PKHD1L1Q86WI1 4243 aa9.41□□□□□ -0.9
ACTN1-217ENST00000556203 M0QXV9 152 aa9.4□□□□□ -0.9
ACTN1-217ENST00000556203 NUPR1O60356 82 aa9.4□□□□□ -0.9
ACTN1-217ENST00000556203 LEPROTL1O95214 131 aa9.39□□□□□ -0.91
ACTN1-217ENST00000556203 PSORS1C2Q9UIG4 136 aa9.39□□□□□ -0.91
ACTN1-217ENST00000556203 LRP1Q07954 4544 aaKnown RBP9.39□□□□□ -0.91
ACTN1-217ENST00000556203 HERC1Q15751 4861 aa9.38□□□□□ -0.91
ACTN1-217ENST00000556203 H0Y8G0 127 aa9.38□□□□□ -0.91
ACTN1-217ENST00000556203 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
ACTN1-217ENST00000556203 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-217ENST00000556203 C1orf137Q5JT78 98 aa9.37□□□□□ -0.91
ACTN1-217ENST00000556203 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
ACTN1-217ENST00000556203 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
ACTN1-217ENST00000556203 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
ACTN1-217ENST00000556203 FABP4P15090 132 aa9.36□□□□□ -0.91
ACTN1-217ENST00000556203 UBE2BP63146 152 aa9.36□□□□□ -0.91
ACTN1-217ENST00000556203 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
ACTN1-217ENST00000556203 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
ACTN1-217ENST00000556203 PFN2P35080 140 aa9.35□□□□□ -0.91
ACTN1-217ENST00000556203 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
ACTN1-217ENST00000556203 ODF1Q14990 250 aa9.35□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BKO60814 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BJP06899 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BOP23527 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BBP33778 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BDP58876 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BCP62807 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST2H2BEQ16778 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BHQ93079 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BNQ99877 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 HIST1H2BMQ99879 126 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 ERG28Q9UKR5 140 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
ACTN1-217ENST00000556203 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
ACTN1-217ENST00000556203 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
ACTN1-217ENST00000556203 LBHQ53QV2 105 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-217ENST00000556203 PLNP26678 52 aa9.3□□□□□ -0.92
ACTN1-217ENST00000556203 COX17Q14061 63 aa9.3□□□□□ -0.92
ACTN1-217ENST00000556203 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
ACTN1-217ENST00000556203 PMCHL2Q9BQD1 86 aa9.3□□□□□ -0.92
ACTN1-217ENST00000556203 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
ACTN1-217ENST00000556203 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
ACTN1-217ENST00000556203 MT1HL1P0DM35 61 aa9.29□□□□□ -0.92
ACTN1-217ENST00000556203 REG3GQ6UW15 175 aa9.29□□□□□ -0.92
ACTN1-217ENST00000556203 MAP1LC3CQ9BXW4 147 aa9.29□□□□□ -0.92
ACTN1-217ENST00000556203 SND1-IT1Q9HBX3 110 aa9.29□□□□□ -0.92
ACTN1-217ENST00000556203 DPM2O94777 84 aa9.27□□□□□ -0.93
ACTN1-217ENST00000556203 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
ACTN1-217ENST00000556203 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
ACTN1-217ENST00000556203 GAGE10A6NGK3 116 aa9.26□□□□□ -0.93
ACTN1-217ENST00000556203 IGKCP01834 107 aa9.26□□□□□ -0.93
ACTN1-217ENST00000556203 LINC00158P58513 81 aa9.26□□□□□ -0.93
ACTN1-217ENST00000556203 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
ACTN1-217ENST00000556203 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms