RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573		H0Y9P7	68 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	HMGN3	Q15651	99 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	MUSTN1	Q8IVN3	82 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	RABAC1	Q9UI14	185 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	NHSL1	Q5SYE7	1610 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	NEB	P20929	6669 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	HMGN2	P05204	90 aa	Known RBP	0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	GNGT1	P63211	74 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	SPCS1	Q9Y6A9	102 aa		0.89	□□□□□ -2.27
KTN1-223	ENST00000555573	FBN2	P35556	2912 aa		0.88	□□□□□ -2.27
KTN1-223	ENST00000555573	TMEM131L	A2VDJ0	1609 aa		0.88	□□□□□ -2.27
KTN1-223	ENST00000555573	ALK	Q9UM73	1620 aa		0.88	□□□□□ -2.27
KTN1-223	ENST00000555573	SPATA8	Q6RVD6	105 aa		0.88	□□□□□ -2.27
KTN1-223	ENST00000555573	PRO0255	Q9UI72	69 aa		0.88	□□□□□ -2.27
KTN1-223	ENST00000555573	PAPPA	Q13219	1627 aa		0.88	□□□□□ -2.27
KTN1-223	ENST00000555573	DIP2B	Q9P265	1576 aa		0.87	□□□□□ -2.27
KTN1-223	ENST00000555573	CACNA1H	O95180	2353 aa		0.87	□□□□□ -2.27
KTN1-223	ENST00000555573	C6orf201	Q7Z4U5	140 aa		0.87	□□□□□ -2.27
KTN1-223	ENST00000555573	CNFN	Q9BYD5	112 aa		0.87	□□□□□ -2.27
KTN1-223	ENST00000555573	NEXMIF	Q5QGS0	1516 aa		0.87	□□□□□ -2.27
KTN1-223	ENST00000555573	SNRPF	P62306	86 aa	Known RBP	0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	KRTAP5-10	Q6L8G5	202 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	TP53AIP1	Q9HCN2	124 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	KIF20B	Q96Q89	1820 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	DCAF1	Q9Y4B6	1507 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	ANKRD17	O75179	2603 aa	Known RBP	0.86	□□□□□ -2.27
KTN1-223	ENST00000555573		A0A1B0GU69	56 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	ALKAL2	Q6UX46	152 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	S100A13	Q99584	98 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	ERVK-7	P63135	1459 aa		0.86	□□□□□ -2.27
KTN1-223	ENST00000555573	KIAA0556	O60303	1618 aa		0.85	□□□□□ -2.27
KTN1-223	ENST00000555573	TULP4	Q9NRJ4	1543 aa		0.85	□□□□□ -2.27
KTN1-223	ENST00000555573	TRBV7-4	A0A0J9YYF1	115 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	LINC00959	A0A1B0GUT2	108 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	IQCF6	A8MYZ5	107 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	NMS	Q5H8A3	153 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	PLAC8	Q9NZF1	115 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	UBE2D4	Q9Y2X8	147 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	MUC16	Q8WXI7	14507 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	TTC28	Q96AY4	2481 aa		0.84	□□□□□ -2.27
KTN1-223	ENST00000555573	LINC00643	Q86TS7	51 aa		0.84	□□□□□ -2.28
KTN1-223	ENST00000555573	SAMD9	Q5K651	1589 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	BIVM-ERCC5	R4GMW8	1640 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	FXYD6-FXYD2	A0A087WZ82	144 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	KANTR	A0A1W2PQU2	76 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573		I3L2K1	104 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	ADIRF	Q15847	76 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	PIGY	Q3MUY2	71 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	ST20	Q9HBF5	79 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	PLCE1	Q9P212	2302 aa		0.83	□□□□□ -2.28
KTN1-223	ENST00000555573	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.82	□□□□□ -2.28
KTN1-223	ENST00000555573	WFDC2	Q14508	124 aa		0.82	□□□□□ -2.28
KTN1-223	ENST00000555573	PLGLA	Q15195	96 aa		0.82	□□□□□ -2.28
KTN1-223	ENST00000555573	KRTAP19-3	Q7Z4W3	81 aa		0.82	□□□□□ -2.28
KTN1-223	ENST00000555573	MUC5AC	P98088	5654 aa		0.82	□□□□□ -2.28
KTN1-223	ENST00000555573	SETBP1	Q9Y6X0	1596 aa		0.81	□□□□□ -2.28
KTN1-223	ENST00000555573	MYMX	A0A1B0GTQ4	84 aa		0.81	□□□□□ -2.28
KTN1-223	ENST00000555573	ACYP1	P07311	99 aa		0.81	□□□□□ -2.28
KTN1-223	ENST00000555573	APC	P25054	2843 aa		0.81	□□□□□ -2.28
KTN1-223	ENST00000555573	LRRC37A	A6NMS7	1700 aa		0.81	□□□□□ -2.28
KTN1-223	ENST00000555573	COL14A1	Q05707	1796 aa	Known RBP	0.81	□□□□□ -2.28
KTN1-223	ENST00000555573		Q8IZM0	81 aa		0.81	□□□□□ -2.28
KTN1-223	ENST00000555573	POLQ	O75417	2590 aa		0.81	□□□□□ -2.28
KTN1-223	ENST00000555573	GOLGA4	Q13439	2230 aa	Known RBP	0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	BDP1	A6H8Y1	2624 aa		0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	KDM5D	Q9BY66	1539 aa		0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	LTN1	O94822	1766 aa		0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	ATP7B	P35670	1465 aa		0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	IGLC2	P0DOY2	106 aa		0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	IGLC3	P0DOY3	106 aa		0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	LRRIQ1	Q96JM4	1722 aa		0.8	□□□□□ -2.28
KTN1-223	ENST00000555573	CHD9	Q3L8U1	2897 aa		0.79	□□□□□ -2.28
KTN1-223	ENST00000555573	LRRC9	Q6ZRR7	1453 aa		0.79	□□□□□ -2.28
KTN1-223	ENST00000555573	RGPD1	P0DJD0	1748 aa		0.79	□□□□□ -2.28
KTN1-223	ENST00000555573	URB1	O60287	2271 aa	Known RBP	0.79	□□□□□ -2.28
KTN1-223	ENST00000555573	RRBP1	Q9P2E9	1410 aa	Known RBP	0.79	□□□□□ -2.28
KTN1-223	ENST00000555573	CEBPZOS	A8MTT3	80 aa		0.78	□□□□□ -2.28
KTN1-223	ENST00000555573	RGPD2	P0DJD1	1756 aa		0.78	□□□□□ -2.28
KTN1-223	ENST00000555573	DOPEY2	Q9Y3R5	2298 aa		0.78	□□□□□ -2.28
KTN1-223	ENST00000555573	SLIT1	O75093	1534 aa		0.78	□□□□□ -2.28
KTN1-223	ENST00000555573	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.78	□□□□□ -2.28
KTN1-223	ENST00000555573	LRRC7	Q96NW7	1537 aa		0.78	□□□□□ -2.28
KTN1-223	ENST00000555573		A0A1B0GUT8	65 aa		0.78	□□□□□ -2.29
KTN1-223	ENST00000555573	QSER1	Q2KHR3	1735 aa		0.78	□□□□□ -2.29
KTN1-223	ENST00000555573	CCDC141	Q6ZP82	1450 aa		0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	CFAP74	Q9C0B2	1584 aa		0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	DST	Q03001	7570 aa	Known RBP	0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	PIEZO1	Q92508	2521 aa		0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	DEFB112	Q30KQ8	113 aa		0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	DEFB123	Q8N688	67 aa		0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	MAP3K1	Q13233	1512 aa		0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	C2CD3	Q4AC94	2353 aa		0.77	□□□□□ -2.29
KTN1-223	ENST00000555573	TSC2	P49815	1807 aa		0.76	□□□□□ -2.29
KTN1-223	ENST00000555573	F8	P00451	2351 aa		0.76	□□□□□ -2.29
KTN1-223	ENST00000555573	PIK3C2B	O00750	1634 aa		0.76	□□□□□ -2.29
KTN1-223	ENST00000555573	FMN2	Q9NZ56	1722 aa		0.76	□□□□□ -2.29
KTN1-223	ENST00000555573	RGPD8	O14715	1765 aa	Predicted RBP	0.76	□□□□□ -2.29
KTN1-223	ENST00000555573	RGPD5	Q99666	1765 aa		0.76	□□□□□ -2.29
KTN1-223	ENST00000555573	FRAS1	Q86XX4	4008 aa		0.76	□□□□□ -2.29
KTN1-223	ENST00000555573		H3BUT2	72 aa		0.75	□□□□□ -2.29

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