RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CLIP1P30622 1438 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 MYMXA0A1B0GTQ4 84 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 FXYD6P3P58550 94 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 PLGLAQ15195 96 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 Q6JHZ5 121 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 DEFB107AQ8IZN7 70 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 LINC00846Q9NV44 126 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 SCN11AQ9UI33 1791 aa1.44□□□□□ -2.18
VRK1-205ENST00000555402 ABCA1O95477 2261 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 F5P12259 2224 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 HAMPP81172 84 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 C10orf113Q5VZT2 155 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 TMEM263Q8WUH6 116 aaKnown RBP1.43□□□□□ -2.18
VRK1-205ENST00000555402 SMCO4Q9NRQ5 59 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 RGPD2P0DJD1 1756 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 TENM1Q9UKZ4 2725 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 NCOA2Q15596 1464 aa1.43□□□□□ -2.18
VRK1-205ENST00000555402 LRP6O75581 1613 aa1.42□□□□□ -2.18
VRK1-205ENST00000555402 H0Y9P7 68 aa1.42□□□□□ -2.18
VRK1-205ENST00000555402 DEFA5Q01523 94 aa1.42□□□□□ -2.18
VRK1-205ENST00000555402 UBE2D4Q9Y2X8 147 aa1.42□□□□□ -2.18
VRK1-205ENST00000555402 CEBPZOSA8MTT3 80 aa1.41□□□□□ -2.18
VRK1-205ENST00000555402 PIN1P1O15428 100 aa1.41□□□□□ -2.18
VRK1-205ENST00000555402 ANKRD36A6QL64 1941 aa1.4□□□□□ -2.18
VRK1-205ENST00000555402 ARFGEF2Q9Y6D5 1785 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 ATP7BP35670 1465 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 TRBV6-1A0A0K0K1D8 114 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 CFDP00746 253 aaPredicted RBP1.4□□□□□ -2.19
VRK1-205ENST00000555402 GNGT1P63211 74 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 C6orf201Q7Z4U5 140 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 PROK2Q9HC23 129 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 CNTRLQ7Z7A1 2325 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 PIK3C2BO00750 1634 aa1.4□□□□□ -2.19
VRK1-205ENST00000555402 UBE2DNLQ8IWF7 75 aa1.39□□□□□ -2.19
VRK1-205ENST00000555402 C18orf32Q8TCD1 76 aa1.39□□□□□ -2.19
VRK1-205ENST00000555402 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
VRK1-205ENST00000555402 MROH1Q8NDA8 1641 aa1.39□□□□□ -2.19
VRK1-205ENST00000555402 ERCC6L2Q5T890 1561 aa1.38□□□□□ -2.19
VRK1-205ENST00000555402 PLXNB2O15031 1838 aa1.38□□□□□ -2.19
VRK1-205ENST00000555402 PDCD5O14737 125 aa1.38□□□□□ -2.19
VRK1-205ENST00000555402 SPINK7P58062 85 aa1.38□□□□□ -2.19
VRK1-205ENST00000555402 SAMD9Q5K651 1589 aa1.38□□□□□ -2.19
VRK1-205ENST00000555402 A0A0G2JMZ2 1700 aa1.37□□□□□ -2.19
VRK1-205ENST00000555402 KIAA0556O60303 1618 aa1.37□□□□□ -2.19
VRK1-205ENST00000555402 SMIM31A0A1B0GVY4 71 aa1.37□□□□□ -2.19
VRK1-205ENST00000555402 SPATA8Q6RVD6 105 aa1.37□□□□□ -2.19
VRK1-205ENST00000555402 CEP170BQ9Y4F5 1589 aaPredicted RBP1.37□□□□□ -2.19
VRK1-205ENST00000555402 MYO7AQ13402 2215 aa1.36□□□□□ -2.19
VRK1-205ENST00000555402 NKTRP30414 1462 aaKnown RBP1.36□□□□□ -2.19
VRK1-205ENST00000555402 RGPD1P0DJD0 1748 aa1.35□□□□□ -2.19
VRK1-205ENST00000555402 A0A1B0GU69 56 aa1.35□□□□□ -2.19
VRK1-205ENST00000555402 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
VRK1-205ENST00000555402 URB2Q14146 1524 aaKnown RBP1.35□□□□□ -2.19
VRK1-205ENST00000555402 LRRC7Q96NW7 1537 aa1.35□□□□□ -2.19
VRK1-205ENST00000555402 ITSN1Q15811 1721 aa1.35□□□□□ -2.19
VRK1-205ENST00000555402 INO80Q9ULG1 1556 aaPredicted RBP1.34□□□□□ -2.19
VRK1-205ENST00000555402 LAMC1P11047 1609 aa1.34□□□□□ -2.19
VRK1-205ENST00000555402 A0A1B0GUT8 65 aa1.34□□□□□ -2.19
VRK1-205ENST00000555402 SPINK9Q5DT21 86 aa1.34□□□□□ -2.19
VRK1-205ENST00000555402 ATP5EP2Q5VTU8 51 aa1.34□□□□□ -2.19
VRK1-205ENST00000555402 ZNF831Q5JPB2 1677 aa1.34□□□□□ -2.19
VRK1-205ENST00000555402 MAGI3Q5TCQ9 1506 aa1.34□□□□□ -2.2
VRK1-205ENST00000555402 DUOX2Q9NRD8 1548 aa1.34□□□□□ -2.2
VRK1-205ENST00000555402 SMIM13P0DJ93 91 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 S100A3P33764 101 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 Q5BKY6 102 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 DEFB121Q5J5C9 76 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 SSBP3-AS1Q7Z2R9 100 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 CACNA1CQ13936 2221 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 SETBP1Q9Y6X0 1596 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 MADDQ8WXG6 1647 aa1.33□□□□□ -2.2
VRK1-205ENST00000555402 CFAP43Q8NDM7 1665 aa1.32□□□□□ -2.2
VRK1-205ENST00000555402 TRBV7-4A0A0J9YYF1 115 aa1.32□□□□□ -2.2
VRK1-205ENST00000555402 PRB3Q04118 309 aaPredicted RBP1.32□□□□□ -2.2
VRK1-205ENST00000555402 DNAJC13O75165 2243 aa1.32□□□□□ -2.2
VRK1-205ENST00000555402 PLCH1Q4KWH8 1693 aa1.32□□□□□ -2.2
VRK1-205ENST00000555402 POLR1AO95602 1720 aaPredicted RBP1.32□□□□□ -2.2
VRK1-205ENST00000555402 LRRC37AA6NMS7 1700 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 QSER1Q2KHR3 1735 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 TIAM2Q8IVF5 1701 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 CADP27708 2225 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 UMAD1C9J7I0 102 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 HEPN1Q6WQI6 88 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 EFCAB5A4FU69 1503 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 TULP4Q9NRJ4 1543 aa1.3□□□□□ -2.2
VRK1-205ENST00000555402 A0A087WXM4 84 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 LINC00959A0A1B0GUT2 108 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 DEFB112Q30KQ8 113 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 ZDBF2Q9HCK1 2354 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 SLIT1O75093 1534 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 PAPPAQ13219 1627 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 ABCA9Q8IUA7 1624 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 USP32Q8NFA0 1604 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 CCDC180Q9P1Z9 1646 aa1.29□□□□□ -2.2
VRK1-205ENST00000555402 IFI27P40305 119 aaPredicted RBP1.28□□□□□ -2.2
VRK1-205ENST00000555402 CICQ96RK0 1608 aaPredicted RBP1.28□□□□□ -2.2
VRK1-205ENST00000555402 WIZO95785 1651 aa1.28□□□□□ -2.2
VRK1-205ENST00000555402 PARP4Q9UKK3 1724 aaKnown RBP1.28□□□□□ -2.2
VRK1-205ENST00000555402 BCORQ6W2J9 1755 aa1.28□□□□□ -2.2
VRK1-205ENST00000555402 KNTC1P50748 2209 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms