RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LOC107984640A0A0U1RRK4 108 aa6.81□□□□□ -1.32
TMEM260-206ENST00000555046 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
TMEM260-206ENST00000555046 ATP6V1G1O75348 118 aa6.81□□□□□ -1.32
TMEM260-206ENST00000555046 LEPROTL1O95214 131 aa6.81□□□□□ -1.32
TMEM260-206ENST00000555046 CXCL5P42830 114 aa6.81□□□□□ -1.32
TMEM260-206ENST00000555046 Q8IZM0 81 aa6.81□□□□□ -1.32
TMEM260-206ENST00000555046 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
TMEM260-206ENST00000555046 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
TMEM260-206ENST00000555046 IGLC3P0DOY3 106 aa6.8□□□□□ -1.32
TMEM260-206ENST00000555046 Q6ZRU5 148 aa6.8□□□□□ -1.32
TMEM260-206ENST00000555046 FAM19A2Q8N3H0 131 aa6.8□□□□□ -1.32
TMEM260-206ENST00000555046 TOMM7Q9P0U1 55 aa6.8□□□□□ -1.32
TMEM260-206ENST00000555046 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
TMEM260-206ENST00000555046 EPM2AB3EWF7 344 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BKO60814 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BJP06899 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BOP23527 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BBP33778 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BDP58876 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BCP62807 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST2H2BEQ16778 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BHQ93079 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BNQ99877 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 HIST1H2BMQ99879 126 aa6.79□□□□□ -1.32
TMEM260-206ENST00000555046 CIRBPQ14011 172 aaKnown RBP6.78□□□□□ -1.32
TMEM260-206ENST00000555046 MAJINQ3KP22 176 aa6.78□□□□□ -1.32
TMEM260-206ENST00000555046 SFTA2Q6UW10 78 aa6.78□□□□□ -1.32
TMEM260-206ENST00000555046 CIRBP-AS1Q8TBR5 109 aa6.78□□□□□ -1.32
TMEM260-206ENST00000555046 MAP1LC3CQ9BXW4 147 aa6.78□□□□□ -1.32
TMEM260-206ENST00000555046 F8VRH5 84 aa6.77□□□□□ -1.33
TMEM260-206ENST00000555046 PLA2G1BP04054 148 aaKnown RBP6.77□□□□□ -1.33
TMEM260-206ENST00000555046 FABP4P15090 132 aa6.77□□□□□ -1.33
TMEM260-206ENST00000555046 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
TMEM260-206ENST00000555046 UNQ6190/PRO20217Q6UXQ8 127 aa6.77□□□□□ -1.33
TMEM260-206ENST00000555046 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
TMEM260-206ENST00000555046 COX7B2Q8TF08 81 aa6.77□□□□□ -1.33
TMEM260-206ENST00000555046 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
TMEM260-206ENST00000555046 SMIM1B2RUZ4 78 aa6.76□□□□□ -1.33
TMEM260-206ENST00000555046 TLX1NBP0CAT3 122 aa6.76□□□□□ -1.33
TMEM260-206ENST00000555046 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
TMEM260-206ENST00000555046 GAGE2BQ13066 116 aa6.76□□□□□ -1.33
TMEM260-206ENST00000555046 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
TMEM260-206ENST00000555046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
TMEM260-206ENST00000555046 A0A087WYN8 130 aa6.75□□□□□ -1.33
TMEM260-206ENST00000555046 NUPR1O60356 82 aa6.75□□□□□ -1.33
TMEM260-206ENST00000555046 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
TMEM260-206ENST00000555046 SPINK8P0C7L1 97 aa6.75□□□□□ -1.33
TMEM260-206ENST00000555046 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
TMEM260-206ENST00000555046 PLNP26678 52 aa6.75□□□□□ -1.33
TMEM260-206ENST00000555046 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
TMEM260-206ENST00000555046 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
TMEM260-206ENST00000555046 LRP2P98164 4655 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 A0A096LNI7 61 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 LINC00310P59036 64 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 RPL18AQ02543 176 aaKnown RBP6.74□□□□□ -1.33
TMEM260-206ENST00000555046 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 STPG4Q8N801 248 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 C7orf33Q8WU49 177 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 KRTAP4-12Q9BQ66 201 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 C6orf48Q9UBA6 75 aa6.74□□□□□ -1.33
TMEM260-206ENST00000555046 IGLV5-39A0A0G2JS06 123 aa6.73□□□□□ -1.33
TMEM260-206ENST00000555046 H0Y8G0 127 aa6.73□□□□□ -1.33
TMEM260-206ENST00000555046 CHTF8P0CG12 524 aa6.73□□□□□ -1.33
TMEM260-206ENST00000555046 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 DPM2O94777 84 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 AKR1D1P51857 326 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 HERVK_113P61574 105 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 HAMPP81172 84 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 ODF1Q14990 250 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 Q5VSD8 79 aa6.72□□□□□ -1.33
TMEM260-206ENST00000555046 TMEM223A0PJW6 202 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 PANO1I0J062 215 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 IGKCP01834 107 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 S100A6P06703 90 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 COX17Q14061 63 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 GAGE2EQ4V326 116 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 PET117Q6UWS5 81 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 GAGE2DQ9UEU5 116 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
TMEM260-206ENST00000555046 MUC2Q02817 5179 aa6.7□□□□□ -1.34
TMEM260-206ENST00000555046 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
TMEM260-206ENST00000555046 Q6ZRP5 223 aa6.7□□□□□ -1.34
TMEM260-206ENST00000555046 PKHD1L1Q86WI1 4243 aa6.69□□□□□ -1.34
TMEM260-206ENST00000555046 C20orf202A1L168 122 aa6.69□□□□□ -1.34
TMEM260-206ENST00000555046 S100A2P29034 98 aa6.69□□□□□ -1.34
TMEM260-206ENST00000555046 HERV-K104P63124 156 aa6.69□□□□□ -1.34
TMEM260-206ENST00000555046 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
TMEM260-206ENST00000555046 PLEKHB2Q96CS7 222 aa6.69□□□□□ -1.34
TMEM260-206ENST00000555046 KRTAP9-9Q9BYP9 154 aa6.69□□□□□ -1.34
TMEM260-206ENST00000555046 KRTAP9-4Q9BYQ2 154 aa6.69□□□□□ -1.34
TMEM260-206ENST00000555046 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
TMEM260-206ENST00000555046 MYMXA0A1B0GTQ4 84 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms