RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 ARL2-SNX15V9GYD0 113 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 MAGI1Q96QZ7 1491 aaPredicted RBP-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 TET3O43151 1660 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 QRICH2Q9H0J4 1663 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 RIF1Q5UIP0 2472 aaKnown RBP-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 HMGXB3Q12766 1538 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 DNHD1Q96M86 4753 aa-0.96□□□□□ -2.56
CFAP54-207ENST00000554821 SMG6Q86US8 1419 aaKnown RBP-0.96□□□□□ -2.56
CFAP54-207ENST00000554821 LAMA1P25391 3075 aa-0.96□□□□□ -2.56
CFAP54-207ENST00000554821 LAMA3Q16787 3333 aa-0.96□□□□□ -2.56
CFAP54-207ENST00000554821 K7EP13 123 aa-0.96□□□□□ -2.56
CFAP54-207ENST00000554821 PLECQ15149 4684 aaKnown RBP-0.96□□□□□ -2.56
CFAP54-207ENST00000554821 FAIMQ9NVQ4 179 aa-0.96□□□□□ -2.56
CFAP54-207ENST00000554821 DNAH2Q9P225 4427 aa-0.97□□□□□ -2.56
CFAP54-207ENST00000554821 FDCSPQ8NFU4 85 aa-0.97□□□□□ -2.56
CFAP54-207ENST00000554821 SPRR2FQ96RM1 72 aa-0.97□□□□□ -2.56
CFAP54-207ENST00000554821 FAM107BQ9H098 131 aa-0.97□□□□□ -2.56
CFAP54-207ENST00000554821 KIAA0556O60303 1618 aa-0.97□□□□□ -2.57
CFAP54-207ENST00000554821 AKAP9Q99996 3911 aa-0.98□□□□□ -2.57
CFAP54-207ENST00000554821 AKAIN1P0CW23 69 aa-0.98□□□□□ -2.57
CFAP54-207ENST00000554821 UQCR10Q9UDW1 63 aa-0.98□□□□□ -2.57
CFAP54-207ENST00000554821 APLNQ9ULZ1 77 aa-0.98□□□□□ -2.57
CFAP54-207ENST00000554821 VPS13DQ5THJ4 4388 aa-0.98□□□□□ -2.57
CFAP54-207ENST00000554821 DNAH9Q9NYC9 4486 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 ACACAQ13085 2346 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 NBASA2RRP1 2371 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 SYS1-DBNDD2H3BUS1 97 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 WHAMMP3Q1A5X7 153 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 SFTA2Q6UW10 78 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 PP6455Q8WZ26 134 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 DPH3P1Q9H4G8 78 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 ANKRD11Q6UB99 2663 aaPredicted RBP-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 TEX15Q9BXT5 2789 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 NAIPQ13075 1403 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 A2ML1A8K2U0 1454 aa-0.99□□□□□ -2.57
CFAP54-207ENST00000554821 CUBNO60494 3623 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 UBE2L5PA0A1B0GUS4 154 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 GNG11P61952 73 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 UBE2L3P68036 154 aaKnown RBP-1□□□□□ -2.57
CFAP54-207ENST00000554821 DEFB135Q30KP9 77 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 C9orf153Q5TBE3 101 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 FAM167A-AS1Q96KT0 104 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 TCHHQ07283 1943 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 FAT3Q8TDW7 4589 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 REV3LO60673 3130 aa-1□□□□□ -2.57
CFAP54-207ENST00000554821 FMN2Q9NZ56 1722 aa-1.01□□□□□ -2.57
CFAP54-207ENST00000554821 COL12A1Q99715 3063 aa-1.01□□□□□ -2.57
CFAP54-207ENST00000554821 TSC22D3Q99576 134 aa-1.01□□□□□ -2.57
CFAP54-207ENST00000554821 MANBALQ9NQG1 85 aa-1.01□□□□□ -2.57
CFAP54-207ENST00000554821 C1orf167Q5SNV9 1468 aa-1.01□□□□□ -2.57
CFAP54-207ENST00000554821 EHBP1L1Q8N3D4 1523 aa-1.01□□□□□ -2.57
CFAP54-207ENST00000554821 SETBP1Q9Y6X0 1596 aa-1.01□□□□□ -2.57
CFAP54-207ENST00000554821 VPS13BQ7Z7G8 4022 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 FAM223BA6NKX1 122 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 CPSF4LA6NMK7 179 aaKnown RBP-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 ADGRL2O95490 1459 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 COX8AP10176 69 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 S100A12P80511 92 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 SCN7AQ01118 1682 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 Q0VG73 95 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 DEFB112Q30KQ8 113 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 KTN1Q86UP2 1357 aaKnown RBP-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 USMG5Q96IX5 58 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 CRIPTQ9P021 101 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 ABCA13Q86UQ4 5058 aa-1.02□□□□□ -2.57
CFAP54-207ENST00000554821 ROCK2O75116 1388 aaKnown RBP-1.03□□□□□ -2.57
CFAP54-207ENST00000554821 UBE2D3P61077 147 aa-1.03□□□□□ -2.57
CFAP54-207ENST00000554821 UBE2D2P62837 147 aa-1.03□□□□□ -2.57
CFAP54-207ENST00000554821 PRO1933Q9H354 126 aa-1.03□□□□□ -2.57
CFAP54-207ENST00000554821 ANK3Q12955 4377 aaKnown RBP-1.03□□□□□ -2.57
CFAP54-207ENST00000554821 LRRK2Q5S007 2527 aa-1.04□□□□□ -2.58
CFAP54-207ENST00000554821 LYSTQ99698 3801 aa-1.04□□□□□ -2.58
CFAP54-207ENST00000554821 SCAPERQ9BY12 1400 aa-1.04□□□□□ -2.58
CFAP54-207ENST00000554821 ITPR1Q14643 2758 aa-1.04□□□□□ -2.58
CFAP54-207ENST00000554821 MGAM2Q2M2H8 2515 aa-1.04□□□□□ -2.58
CFAP54-207ENST00000554821 A0A0C4DFX4 3053 aa-1.04□□□□□ -2.58
CFAP54-207ENST00000554821 CCDC168Q8NDH2 2452 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 A0A1B0GWA3 101 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 F6UZH7 168 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 HMGN1P05114 100 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 C1orf54Q8WWF1 131 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 MTORP42345 2549 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 PKD1L2Q7Z442 2459 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 KNL1Q8NG31 2342 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 NLRP1Q9C000 1473 aa-1.05□□□□□ -2.58
CFAP54-207ENST00000554821 CUL7Q14999 1698 aa-1.06□□□□□ -2.58
CFAP54-207ENST00000554821 FAM24AA6NFZ4 105 aa-1.06□□□□□ -2.58
CFAP54-207ENST00000554821 SNAPC5O75971 98 aa-1.06□□□□□ -2.58
CFAP54-207ENST00000554821 TRAPPC2P0DI81 140 aa-1.06□□□□□ -2.58
CFAP54-207ENST00000554821 TRAPPC2BP0DI82 140 aa-1.06□□□□□ -2.58
CFAP54-207ENST00000554821 H1FX-AS1Q4G0G2 97 aa-1.06□□□□□ -2.58
CFAP54-207ENST00000554821 PLEKHH2Q8IVE3 1493 aa-1.06□□□□□ -2.58
CFAP54-207ENST00000554821 COX6CP09669 75 aa-1.07□□□□□ -2.58
CFAP54-207ENST00000554821 ATP5EP56381 51 aaPredicted RBP-1.07□□□□□ -2.58
CFAP54-207ENST00000554821 SEC11AP67812 179 aa-1.07□□□□□ -2.58
CFAP54-207ENST00000554821 PRO1854Q9UHT4 67 aa-1.07□□□□□ -2.58
CFAP54-207ENST00000554821 XRN1Q8IZH2 1706 aaKnown RBP-1.07□□□□□ -2.58
CFAP54-207ENST00000554821 PAPPA2Q9BXP8 1791 aa-1.08□□□□□ -2.58
CFAP54-207ENST00000554821 MARF1Q9Y4F3 1742 aaKnown RBP-1.08□□□□□ -2.58
CFAP54-207ENST00000554821 H0YGG7 62 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms