RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
APEX1-208ENST00000554813 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
APEX1-208ENST00000554813 ATP5LO75964 103 aa8.29□□□□□ -1.08
APEX1-208ENST00000554813 PMCHL1Q16048 86 aa8.29□□□□□ -1.08
APEX1-208ENST00000554813 C9orf116Q5BN46 136 aaPredicted RBP8.29□□□□□ -1.08
APEX1-208ENST00000554813 PDZD11Q5EBL8 140 aa8.29□□□□□ -1.08
APEX1-208ENST00000554813 Q6ZRP5 223 aa8.29□□□□□ -1.08
APEX1-208ENST00000554813 CHCHD1Q96BP2 118 aaKnown RBP8.29□□□□□ -1.08
APEX1-208ENST00000554813 MYCBP2O75592 4640 aa8.29□□□□□ -1.08
APEX1-208ENST00000554813 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
APEX1-208ENST00000554813 NDUFC2-KCTD14E9PQ53 114 aa8.28□□□□□ -1.08
APEX1-208ENST00000554813 GAGE2EQ4V326 116 aa8.28□□□□□ -1.08
APEX1-208ENST00000554813 GAGE2DQ9UEU5 116 aa8.28□□□□□ -1.08
APEX1-208ENST00000554813 H3BRM9 83 aa8.27□□□□□ -1.09
APEX1-208ENST00000554813 OXTP01178 125 aa8.27□□□□□ -1.09
APEX1-208ENST00000554813 CXCL5P42830 114 aa8.27□□□□□ -1.09
APEX1-208ENST00000554813 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
APEX1-208ENST00000554813 F8VRH5 84 aa8.26□□□□□ -1.09
APEX1-208ENST00000554813 HNRNPA3P51991 378 aaKnown RBP8.26□□□□□ -1.09
APEX1-208ENST00000554813 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
APEX1-208ENST00000554813 TRGC2P03986 189 aa8.25□□□□□ -1.09
APEX1-208ENST00000554813 IGLC3P0DOY3 106 aa8.25□□□□□ -1.09
APEX1-208ENST00000554813 BAGE3Q86Y29 109 aa8.25□□□□□ -1.09
APEX1-208ENST00000554813 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
APEX1-208ENST00000554813 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
APEX1-208ENST00000554813 SPINK8P0C7L1 97 aa8.24□□□□□ -1.09
APEX1-208ENST00000554813 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
APEX1-208ENST00000554813 HSBP1O75506 76 aa8.23□□□□□ -1.09
APEX1-208ENST00000554813 COLCA2A8K830 154 aa8.22□□□□□ -1.09
APEX1-208ENST00000554813 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
APEX1-208ENST00000554813 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
APEX1-208ENST00000554813 IFI27L1Q96BM0 104 aa8.22□□□□□ -1.09
APEX1-208ENST00000554813 ZNF22P17026 224 aaPredicted RBP8.21□□□□□ -1.1
APEX1-208ENST00000554813 CHTOPQ9Y3Y2 248 aaKnown RBP8.21□□□□□ -1.1
APEX1-208ENST00000554813 HERC1Q15751 4861 aa8.2□□□□□ -1.1
APEX1-208ENST00000554813 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
APEX1-208ENST00000554813 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
APEX1-208ENST00000554813 TMEM170BQ5T4T1 132 aa8.2□□□□□ -1.1
APEX1-208ENST00000554813 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
APEX1-208ENST00000554813 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
APEX1-208ENST00000554813 C11orf86A6NJI1 115 aa8.19□□□□□ -1.1
APEX1-208ENST00000554813 FAM19A2Q8N3H0 131 aa8.19□□□□□ -1.1
APEX1-208ENST00000554813 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
APEX1-208ENST00000554813 M0QXV9 152 aa8.18□□□□□ -1.1
APEX1-208ENST00000554813 XAGE1AQ9HD64 81 aa8.18□□□□□ -1.1
APEX1-208ENST00000554813 PKHD1L1Q86WI1 4243 aa8.18□□□□□ -1.1
APEX1-208ENST00000554813 SERF1AO75920 110 aa8.17□□□□□ -1.1
APEX1-208ENST00000554813 SRSF9Q13242 221 aaKnown RBP eCLIP8.17□□□□□ -1.1
APEX1-208ENST00000554813 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
APEX1-208ENST00000554813 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
APEX1-208ENST00000554813 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
APEX1-208ENST00000554813 LEPROTL1O95214 131 aa8.16□□□□□ -1.1
APEX1-208ENST00000554813 UBE2BP63146 152 aa8.16□□□□□ -1.1
APEX1-208ENST00000554813 SFTA2Q6UW10 78 aa8.16□□□□□ -1.1
APEX1-208ENST00000554813 LBHQ53QV2 105 aaPredicted RBP8.15□□□□□ -1.1
APEX1-208ENST00000554813 REG3GQ6UW15 175 aa8.15□□□□□ -1.1
APEX1-208ENST00000554813 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.1
APEX1-208ENST00000554813 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
APEX1-208ENST00000554813 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.11
APEX1-208ENST00000554813 PFN2P35080 140 aa8.14□□□□□ -1.11
APEX1-208ENST00000554813 LINC00310P59036 64 aa8.14□□□□□ -1.11
APEX1-208ENST00000554813 ODF1Q14990 250 aa8.14□□□□□ -1.11
APEX1-208ENST00000554813 SERTAD4-AS1Q5TG53 156 aa8.14□□□□□ -1.11
APEX1-208ENST00000554813 TMEM223A0PJW6 202 aa8.13□□□□□ -1.11
APEX1-208ENST00000554813 H0Y8G0 127 aa8.13□□□□□ -1.11
APEX1-208ENST00000554813 SCO1O75880 301 aa8.13□□□□□ -1.11
APEX1-208ENST00000554813 COX17Q14061 63 aa8.13□□□□□ -1.11
APEX1-208ENST00000554813 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
APEX1-208ENST00000554813 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
APEX1-208ENST00000554813 PLA2G2DQ9UNK4 145 aa8.13□□□□□ -1.11
APEX1-208ENST00000554813 NUPR1O60356 82 aa8.12□□□□□ -1.11
APEX1-208ENST00000554813 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
APEX1-208ENST00000554813 FABP4P15090 132 aa8.12□□□□□ -1.11
APEX1-208ENST00000554813 LINC01600Q96MT4 127 aa8.12□□□□□ -1.11
APEX1-208ENST00000554813 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
APEX1-208ENST00000554813 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
APEX1-208ENST00000554813 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
APEX1-208ENST00000554813 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
APEX1-208ENST00000554813 DIRC1Q969H9 104 aa8.1□□□□□ -1.11
APEX1-208ENST00000554813 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
APEX1-208ENST00000554813 PLNP26678 52 aa8.09□□□□□ -1.11
APEX1-208ENST00000554813 HIST1H2BKO60814 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BJP06899 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BOP23527 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BBP33778 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 LINC00158P58513 81 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BDP58876 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BCP62807 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST2H2BEQ16778 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.08□□□□□ -1.12
APEX1-208ENST00000554813 NKAPP1Q8N9T2 125 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BHQ93079 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BNQ99877 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 HIST1H2BMQ99879 126 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 SND1-IT1Q9HBX3 110 aa8.08□□□□□ -1.12
APEX1-208ENST00000554813 IGLV5-37A0A075B6J1 123 aa8.07□□□□□ -1.12
APEX1-208ENST00000554813 DPM2O94777 84 aa8.07□□□□□ -1.12
APEX1-208ENST00000554813 LINC00167Q96N53 147 aa8.07□□□□□ -1.12
APEX1-208ENST00000554813 LINC00587B1AMM8 73 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms