RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 IGKV1D-39P04432 117 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 PRM2P04554 102 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 PATE4P0C8F1 98 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 CD24P25063 80 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 LINC01547P58512 204 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-227ENST00000554491 SYCNQ0VAF6 134 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 C6orf99Q4VX62 202 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 PRNTQ86SH4 94 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 RNF185Q96GF1 192 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 FGF23Q9GZV9 251 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-227ENST00000554491 CYP4F30PQ9H0H9 118 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 RYR1P21817 5038 aa3.1□□□□□ -1.91
ATXN3-227ENST00000554491 PCNX3Q9H6A9 2034 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 SACSQ9NZJ4 4579 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 A0A087WZ39 114 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 IGHV6-1A0A0B4J1U7 121 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV3D-7A0A0C4DH55 119 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 A0A0J9YX75 114 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 COX7A2P2O60397 106 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 NDUFA3O95167 84 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 SAA1P0DJI8 122 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-227ENST00000554491 FAM229BQ4G0N7 80 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 SPANXN1Q5VSR9 72 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 FAM53AQ6NSI3 398 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-227ENST00000554491 ITLN1Q8WWA0 313 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 TMEM141Q96I45 108 aa3.09□□□□□ -1.91
ATXN3-227ENST00000554491 IGKV3D-20A0A0C4DH25 116 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 hDV103S1A0JD37 113 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 GNRH2O43555 120 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 DNAL4O96015 105 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 IGKV3-15P01624 115 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 IGHV3-9P01782 118 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 DEFA4P12838 97 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 RPL28P46779 137 aaKnown RBP3.08□□□□□ -1.92
ATXN3-227ENST00000554491 Q8N6K4 173 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 CLEC2BQ92478 149 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 RMI2Q96E14 147 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 FAM167A-AS1Q96KT0 104 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 ARFGEF3Q5TH69 2177 aa3.08□□□□□ -1.92
ATXN3-227ENST00000554491 DOCK11Q5JSL3 2073 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 A0A087WVE0 104 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 TRAV22A0A0B4J277 110 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 A0A0J9YXV3 536 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 SDHAF1A6NFY7 115 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 C11orf86A6NJI1 115 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 C12orf77C9JDV5 145 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 IGLV1-44P01699 117 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 IGHV3-13P01766 116 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 BAALC-AS2P0C853 105 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 PATE2Q6UY27 113 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 Q6ZRP5 223 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 MIR17HGQ75NE6 70 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 SCXQ7RTU7 201 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 KLF14Q8TD94 323 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-227ENST00000554491 LINC00574Q9H8X3 128 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 NDUFA12Q9UI09 145 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 DNAH1Q9P2D7 4330 aa3.07□□□□□ -1.92
ATXN3-227ENST00000554491 TRAV23DV6A0A075B6W5 121 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 IGHV1-69DA0A0B4J2H0 117 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 IGHV4-61A0A0C4DH41 118 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 C16orf90A8MZG2 172 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 C3orf84H3BNL1 204 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 H7C2G1 150 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 PLXNB1O43157 2135 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 ARMS2P0C7Q2 107 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 IGHV1-2P23083 117 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 C11orf71Q6IPW1 123 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 MUSTN1Q8IVN3 82 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 CNEP1R1Q8N9A8 125 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 OBSCN-AS1Q96MR7 158 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 SCGB3A1Q96QR1 104 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 LIMD2Q9BT23 127 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
ATXN3-227ENST00000554491 IGLV2-18A0A075B6J9 118 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 A0A1B0GW54 56 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 IGIPA6NJ69 53 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 C17orf98A8MV24 154 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 SRRM5B3KS81 715 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 HCG22E2RYF7 251 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 I3L3M4 83 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 IGKV1-16P04430 117 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 CGB3P0DN86 165 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 CGB7P0DN87 165 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 LMO4P61968 165 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 ADAMTSL4-AS1Q5T5F5 129 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 LINC00322Q6ZN03 302 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-227ENST00000554491 TMEM14BQ9NUH8 114 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 LINC00846Q9NV44 126 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 ZNF706Q9Y5V0 76 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-227ENST00000554491 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
ATXN3-227ENST00000554491 DNAH3Q8TD57 4116 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 TRBV7-4A0A0J9YYF1 115 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 M0R3E3 92 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 SOCS3O14543 225 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 LY6HO94772 140 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 PPP1R17O96001 155 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 LHBP01229 141 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 PRB2P02812 416 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-227ENST00000554491 FXYD7P58549 80 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 BSPH1Q075Z2 132 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms